Basic Information

Insect: Chrysomya rufifacies
Gene Symbol: -
Assembly: GCA_014858695.1
Location: JACGTJ010001985.1:6324-12332[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.015 0.81 10.3 0.1 3 23 33 53 31 53 0.96

2 17 0.021 1.2 9.8 2.1 1 23 59 82 59 82 0.93

3 17 0.33 18 6.0 0.2 3 23 87 109 86 109 0.85

4 17 0.0017 0.094 13.2 0.2 1 21 117 137 117 138 0.95

5 17 4.5e-06 0.00024 21.3 0.9 1 23 146 168 146 168 0.97

6 17 0.00012 0.0065 16.8 3.5 1 23 174 196 174 196 0.98

7 17 7.5e-05 0.0041 17.5 1.3 1 23 202 224 202 224 0.95

8 17 0.22 12 6.6 1.4 2 21 231 250 230 251 0.94

9 17 0.66 36 5.1 0.2 2 23 691 713 690 713 0.94

10 17 0.31 17 6.1 0.6 1 10 737 746 737 759 0.79

11 17 0.58 32 5.2 2.3 1 23 767 791 767 791 0.92

12 17 2.2 1.2e+02 3.4 1.0 3 23 797 818 797 818 0.95

13 17 0.14 7.4 7.2 0.3 2 21 831 850 830 851 0.91

14 17 0.00021 0.011 16.1 0.9 1 23 859 881 859 881 0.98

15 17 6.4e-06 0.00035 20.8 1.8 1 23 887 910 887 910 0.97

16 17 6.6e-05 0.0036 17.6 1.3 1 23 916 938 916 938 0.98

17 17 0.00043 0.023 15.1 1.1 1 21 944 964 944 965 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.015	0.81	10.3	0.1	3	23	33	53	31	53	0.96
2	17	0.021	1.2	9.8	2.1	1	23	59	82	59	82	0.93
3	17	0.33	18	6.0	0.2	3	23	87	109	86	109	0.85
4	17	0.0017	0.094	13.2	0.2	1	21	117	137	117	138	0.95
5	17	4.5e-06	0.00024	21.3	0.9	1	23	146	168	146	168	0.97
6	17	0.00012	0.0065	16.8	3.5	1	23	174	196	174	196	0.98
7	17	7.5e-05	0.0041	17.5	1.3	1	23	202	224	202	224	0.95
8	17	0.22	12	6.6	1.4	2	21	231	250	230	251	0.94
9	17	0.66	36	5.1	0.2	2	23	691	713	690	713	0.94
10	17	0.31	17	6.1	0.6	1	10	737	746	737	759	0.79
11	17	0.58	32	5.2	2.3	1	23	767	791	767	791	0.92
12	17	2.2	1.2e+02	3.4	1.0	3	23	797	818	797	818	0.95
13	17	0.14	7.4	7.2	0.3	2	21	831	850	830	851	0.91
14	17	0.00021	0.011	16.1	0.9	1	23	859	881	859	881	0.98
15	17	6.4e-06	0.00035	20.8	1.8	1	23	887	910	887	910	0.97
16	17	6.6e-05	0.0036	17.6	1.3	1	23	916	938	916	938	0.98
17	17	0.00043	0.023	15.1	1.1	1	21	944	964	944	965	0.95

Sequence Information

Coding Sequence: ATGGCCGACACCAATAATGCCTCCACCTCTGCAGAAGCAGCTGCCGCACAAGCTATGCTCGTCAAACTCTCCACCGATGGTGTTCCCAAACTATTTTGTCCCGTCTGTAATAAGGCACTTGTCTCTTTAGCCGGTTATGTGAAACATGTTAAAAAACATGAACCACCTGGCGGTTTCCTATGCCGCTATTGTGAGGCACGTTTCTGTTCCGATGAAGAGCTCAAAAAACATCGTGAATCTGTACACACCACTATTGCCTGTCGTCTCTGTAAAGATGTAACTTTTACCAATGAAGATGATTATCGTTCTCATATACGTGATATACATCAGGGTGTTGATCGTGAAATTTTTACATGTGATAAATGCGGTGCCACCTATAAAACTATAGATCCTTATCGTCGTCATATGGATACGGAATGTGGTCGCATAAAACCGTATAAATGCGATAAATGTCCGATGGCATTTGTTACGAAATATAATTTAAAACAACATTTAGATAACCATTCGGGTGAATTGAAATTTTGTTGTAGTTATTGTGGTAGAAATTTTAAACAAAAAGCTAGATTGGTGGAACATGAAAGAACCCATACCGGAGAGAAGCCGTATAAGTGTGATGTGTGTGGCAAAAGTTTTTCTCATCGTGAAAGTATAGTCACTCATTCTTCCATACATACCGGTATACGTTTGGTAGAATGTAAAGCCTGCGGCTCCCGTTTTTCCTGTTATTCCAATCTCATTAAACATCGACGTAATCGTCCCGATACTTGTGGTCTACCACAGTTTGATCCACCAAGAAATCGCATTAGAAAACACACTTCAAGAATTCCAGCCACCTTAAATCCCACATCTGAAATTAAGGTAGTTAATGTCAATAAAGTTATAAAACCCGACGATAAAGTCAAAGTTGCCGCTATGAAAAAAGAATCGCCCGATAAACTTTTGAAAATTAAACCAACAGCAAGAAAACGTACTGGAGGACCTAGACCTACACCTACCCTACGTAAAAGAAGTCCACGCAAAAAAGTAGCAGAATTAAACTTTATAAAAGACGATGAAGAAGAGGAGGAGGAAGAAGATGAATTAAAGATGGAGGAAGATTTTGAGGCAGATGATGATGAGGAGTATTTACCTTTGAAAACTAGACAAAAAATAGAAATAAAAACATTAGATGAAAATAGTTTACCACCACCGGCGCCTGAAATCATAATGAAGGACGATGAATCTTTACAAAATCCCACTACAACCCAATGGTCAGATGATAGTGAAGATGAATACGTACCCGATTTTGAACCGGATGATACGGATACAGAAAATGATGAGGAGGAACAGGAAGATAAGGATTTTAAATTACCTATGCCGGCAACAGGTATTAAACAGGAAAATACAGATGAAATGGAAGAAGATATAGAGGCCATTACCACCAATATACAAATAGAACCTTTAGGAGATTTCGAATATACACGTATGGATAATTATACAGCAGAAGTTAAATATGAAGAAGAGGAAGAAGATAATTTATTTGATGAAAAGGATCGTATTTTGGAACATTTATTAAATGAAAATGATTACACGCAACTGCAGGAGGTGACGGAACAAAAACCCATAGAAACTAAAAGAAGAAGAAGGCCTAGAAAGTCGACTAATTTAAGAGAAACTAAGGAAACAGAAGATATTCTAAAGGAGACAGAAGTGACTTTAATTAAATATGAAGATAGTGAGGAAGACTATGGGCCAGAGGAAGATATTTTAGAAGAAAAACCTGAGCTACTTACCGTAACCAAGGATGATATTAAGGATTGTTATGTTCTACTGGAAGACATAACACATTGTTTTCCCACACTAAAAGAAACACCCAGCGTTAAAGTGCCACGTAATACCCAACCTTTCTTTTCGAAATCGGAAAAAGTTAAAAAATTCATTAAAAAACGTGGCAAATATCGTCCCAGAAAACCAAAAAGTGAACCTATATCAGATGATGAAAGTAAATCTAAATCTTATCGTTTAGCTTCCATAACAGCGAAACAACTGAAGGAACGCATGAAACTAATAAAGAAACGTGATAAATCTTGGAAATGTCCAGAATGTATAAAAATCTATTATATGCGTAAGCCTTATGAGAAACATTTAAGAGATGATCATAAAAAATCTGAGGATTTTATTAAAGAAATCTTCAAGAATGACTTGGAAGAGGTACAAACAGATGATGTATTCAAATGTCATATATGTGATAAAATCTATTTAATGGAAAAACGATTATTGTCACACATACCCAAACATGGTCCCGATGGCACATTAATACACAAATGTCCATGCTATTGTACTCTCTATTTTGCTACACGCGAAGAAGCTACCGCACATGCCCAGGACAAACATAAAGAAATGTTATGGTGTGAGATATGTGAAAAGTTTATGACTGGATGTGATGCTCTTAAATCACATAAGGCACGCATACATGGAGGCAATAAGGATTATAAGAATTCAAGAAATTTAGTTTGTATGAAATGTGGCAAGAAATTTTTGGGTCGTACACAATTAACCGATCATGAAAGATCCGATTGTGGCCGTTTGCCTTTGTATCAGTGTCAGGAATGTGGTAAATGTTTGACTACAGCGGGCATATTGAAAACCCATATGCTATTGCATAGTGATGCACGTCCCTATCAATGTGATAAATGTGGCAAGACATTTAAAATTAAAGCTCAATATAAAACACATATTAAATATGCTCATACCGATGAGAAAAGATTTAAATGTCATCTTTGTCCTAAAGAGTATCCATATCGTGAAAGTTTACTTACCCATATGTCTGTACACACGGGCATTAAACGTTTCATGTGTAATGGTTGTGGCAAACGTTTTACTTGTGTTTCGAATCTACAGGCTCATCGTAAGGTACAAGCAGAAACTTGTGGCCTTTTACCCTTAAATGCTAAGGCTACACAATATATGGGTGTACAAAAAGGTAACTTGCTAATGGGAGCCAAACCAGAGCCCGGTTTAGATTATGTAGAAACTAGAACATTTGTAGCCAAGGATGTTATAACACACGATTTGCCCATGGCCCAAGAGTTAAACAATCAAACGAGATCAATGCAACAAGATAATTCATTAAGTGATGGCATACCTTTAAATTATGTTACCTCGGGATCTGAAATTTTATTAATGTATAATAGAGATTAA
Protein Sequence: MADTNNASTSAEAAAAQAMLVKLSTDGVPKLFCPVCNKALVSLAGYVKHVKKHEPPGGFLCRYCEARFCSDEELKKHRESVHTTIACRLCKDVTFTNEDDYRSHIRDIHQGVDREIFTCDKCGATYKTIDPYRRHMDTECGRIKPYKCDKCPMAFVTKYNLKQHLDNHSGELKFCCSYCGRNFKQKARLVEHERTHTGEKPYKCDVCGKSFSHRESIVTHSSIHTGIRLVECKACGSRFSCYSNLIKHRRNRPDTCGLPQFDPPRNRIRKHTSRIPATLNPTSEIKVVNVNKVIKPDDKVKVAAMKKESPDKLLKIKPTARKRTGGPRPTPTLRKRSPRKKVAELNFIKDDEEEEEEEDELKMEEDFEADDDEEYLPLKTRQKIEIKTLDENSLPPPAPEIIMKDDESLQNPTTTQWSDDSEDEYVPDFEPDDTDTENDEEEQEDKDFKLPMPATGIKQENTDEMEEDIEAITTNIQIEPLGDFEYTRMDNYTAEVKYEEEEEDNLFDEKDRILEHLLNENDYTQLQEVTEQKPIETKRRRRPRKSTNLRETKETEDILKETEVTLIKYEDSEEDYGPEEDILEEKPELLTVTKDDIKDCYVLLEDITHCFPTLKETPSVKVPRNTQPFFSKSEKVKKFIKKRGKYRPRKPKSEPISDDESKSKSYRLASITAKQLKERMKLIKKRDKSWKCPECIKIYYMRKPYEKHLRDDHKKSEDFIKEIFKNDLEEVQTDDVFKCHICDKIYLMEKRLLSHIPKHGPDGTLIHKCPCYCTLYFATREEATAHAQDKHKEMLWCEICEKFMTGCDALKSHKARIHGGNKDYKNSRNLVCMKCGKKFLGRTQLTDHERSDCGRLPLYQCQECGKCLTTAGILKTHMLLHSDARPYQCDKCGKTFKIKAQYKTHIKYAHTDEKRFKCHLCPKEYPYRESLLTHMSVHTGIKRFMCNGCGKRFTCVSNLQAHRKVQAETCGLLPLNAKATQYMGVQKGNLLMGAKPEPGLDYVETRTFVAKDVITHDLPMAQELNNQTRSMQQDNSLSDGIPLNYVTSGSEILLMYNRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01261217;
90% Identity: -
80% Identity: -