Basic Information

Insect: Chrysomya rufifacies
Gene Symbol: -
Assembly: GCA_014858695.1
Location: JACGTJ010009090.1:9780-15869[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00026 0.014 15.8 0.2 2 23 388 409 388 409 0.97

2 11 1.3e-06 6.9e-05 23.1 2.8 1 23 415 437 415 437 0.98

3 11 0.00025 0.014 15.8 4.1 1 23 443 465 443 465 0.99

4 11 4.9e-06 0.00027 21.2 1.5 1 23 471 493 471 493 0.99

5 11 0.0015 0.081 13.4 3.8 1 23 499 523 499 523 0.92

6 11 8 4.4e+02 1.7 0.2 3 18 590 605 589 605 0.92

7 11 7.1e-05 0.0039 17.5 0.7 2 23 945 966 944 966 0.97

8 11 5.7e-06 0.00031 21.0 2.7 1 23 972 994 972 994 0.98

9 11 0.00034 0.019 15.4 3.1 1 23 1000 1022 1000 1022 0.98

10 11 1.8e-06 9.7e-05 22.6 0.8 1 23 1028 1050 1028 1050 0.98

11 11 0.00069 0.038 14.4 2.3 1 23 1056 1080 1056 1080 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00026	0.014	15.8	0.2	2	23	388	409	388	409	0.97
2	11	1.3e-06	6.9e-05	23.1	2.8	1	23	415	437	415	437	0.98
3	11	0.00025	0.014	15.8	4.1	1	23	443	465	443	465	0.99
4	11	4.9e-06	0.00027	21.2	1.5	1	23	471	493	471	493	0.99
5	11	0.0015	0.081	13.4	3.8	1	23	499	523	499	523	0.92
6	11	8	4.4e+02	1.7	0.2	3	18	590	605	589	605	0.92
7	11	7.1e-05	0.0039	17.5	0.7	2	23	945	966	944	966	0.97
8	11	5.7e-06	0.00031	21.0	2.7	1	23	972	994	972	994	0.98
9	11	0.00034	0.019	15.4	3.1	1	23	1000	1022	1000	1022	0.98
10	11	1.8e-06	9.7e-05	22.6	0.8	1	23	1028	1050	1028	1050	0.98
11	11	0.00069	0.038	14.4	2.3	1	23	1056	1080	1056	1080	0.93

Sequence Information

Coding Sequence: ATGGAAATAAATATAACTTGGAATATATGCCGTATTTGCCTACAAGAAGAAAGAAAAAATGTGTCTGGAGTTGAAGCTATTGAACCACGAATGCGCAACTTATTTGAAGAAAATAAAAAATTAGCAAAATATATTTATGAACTTACAGGAATTTTTATGAAGCCCAATGATTCTCTGCCGGATAAAATTTGTCTAAAATGCTTAAAAATGATTAACAATGCTATACATTTTCGAAAAACTTGCATAAATTCCAATGCCTATTTACTTAATATATTGGAACGCACACAAAAGGCTAGTTCTTTATTTAAACCGGAAGGTGTTGCTGAAAGTATATCAGATAATGAATTGTATGATGATGATAATGATGAGGAAGATGAAAAAATGTTTGTTGAGGAAAAAAATTGGCATGAAATTGATGTTGAACATTCCAATTTAGAAAAGCATGAAAAAAAGAAAGATAATTTAGATGATGACAAACATAAAGAGTGTGAATCAAATGATAGTATAGAGAATTTGGACGAAATTATTGAACATTTCGAAGATTCCAGTACACCGACAGATGAAACATGTACAATAACTGTTGAAAATACAACTAAAGATAGCATTCCAAATGGAAAACAAGGTAAAGAACAAAATCAGCAATATTCTGTTGATGATGAAAAGAAAATTAAAACTAATACCACACAATTGCAAAAATTCCTTATGAATGCTAAATTTAACGAGGTAAAAGAAACACATAAAGTTAAGGTTGATCAGAGAGAATTATATTATCTAATAGAAGATATGGAAAATGAAAGTTCAAATGATAAACCAGATGAATTAAAAGAATTAGATGAAGCACAACTTATTATGACTGATGATAATGTAGAGATTTATGAAATTGAAGAACCTGAAGAGGAGAATTTAATGTTACATACAGAAGATGAAAATGATGAAAATAATCAAGCCCAAGTTACTTCAACTGTAGATACAAATGATGAAGCTATTTATAGTGAAGAAAATTCACAAGAATCTAATACATCAAAAGATTTGGAAGATATAGTAAGCGATAATACGTCGCAAAAGTCAGCAGTTTTACAAAGTAGCAAAAACAATGTAACAAAATCTATAAAACGTAAAGCAAGTACAAAACATTTGGGACGAGTTGATGCTTCTGCAAATGTTTGTGATGTATGTGGTAATCAATTTCAAAATCGCGCAATGTTAAAATTACATATGAGAATTCATAATCAGGAAAGAAATCATCAATGCGAAATCTGTTATAAAAGTTTTATAACCGCCTGTAATCTTCAGGCTCATATGCGCATCCATACGGGAGAAAAACCTTACGAGTGCAAATATTGTGGAAGGCGATTTAGTGATCGTACCTCCCATATAAGACATGAAAGAACTCACACCAATGAGAAACCTTTTAAATGTTCAAATTGTAATAAAACTTTTAGTTTGGCTACTACCCTTCAAAACCATATAAAAGTCCATACTAATGAAAGATCTTATAGATGTGAACCATGTGGTAAAAGTTTTAAATTGTCTCATCATTTAAAAACCCATGAAAATACATCATTACACCGTTCGTGTAAAATGGAGATCAATATAACCTGGAATATATGTCGCGTGTGTCTCAAAGAAGAACAAAAGAAACCTTTGGGGGTAACAAATGAAGATGCCATGAGGCATCTATTCAATGATGACAAACTATTGGCCAAACAGATTTTTGATTGTACGGGTATAAAAATGAAACTCAATGATGGTTTACCGGAAAAGATATGTAAAAAGTGTTTAACTATAGTTAAACATTCTGCGAATTTACGTAAAACTTGTCGTGCTTCGGATATATATTTACAAAATCTCTTAGAACGTACCAAATCAGCAAGTTCATTATTTAAACCACAATGGCAAACGGAGGAAGATATTGAAGATGATCCTTTATCATGTAGTACTAATGACGACGAGGATGATAAACAACCAGAAACTTTAAAACGTAAACTTGCTCCTTTACATAAACCTTCGAAAAAATCATGCACTACAAAAAATTCGGAAGATAGTGAAATTAATGGTAATTCTGATAACGAAATTAATAGTAATTCTCAAACACATGATGATGTGGAGGAAAATAATTTAAATCATATCGTTGAAGAAGTCTTAGATAGTTCAGAAAGTCTGACAGATCATGAACAGAAAATTAAAACATTGAATTTACAAGATTTTCATATAAATAATGATACAGAATTTGTGGATACTGCTGAATCAGAGATAAAATATAATAATGAACAACTTTATTATGTGGTAAAAGAGGAACTGACAGAAAATGCATCACCGGAACAAACTCAAGAACATAGGGATGAAATAAACCAACATAATCTAAAAACAGATGATACAGAAGATGAAAATGTCCAATATGTACCATTTGAAGAGGATGAAAATAATGTAGATGAATGTGAAATTGATGAAGAACAAATAATACATTTAGCCGAATCTGATATAGACGATAATCAGGCACAAGTTTCCTCAACTGTAGATACCAAAGAAGATCAAGGTGATTTTAATGTACAAATGGAAGAGGAAGAGGGGGAGGAAGAGGACGTTGAAGAAGTTCAAAATTCTAATTTATCTACTGCCTCAAATGAATTGCAAACCGAATATATAGTTGATGAATATTTAGTGGATGATTCCAGTAGCAATATTTCAACACGCTCTTCTAGTATTGTTCTATTAAAGGCTAAAACGCCAAATGCTAATCGTGCCAAAACAATTCTTCCCGAACGCAAAACAAAACCATCGGGACAAATTAAAGCTGTGGCAAGTAGTTCAGTGGGTGGTATGCAAGTGTGGGTTTGTGATTTATGTGGTAATCATTTTAGTAATCGCCAATTGTTAAATATTCATATGAAAATACATCGTCAAGAAAAAAATCATGAATGCGAATTATGTTCTAAACGTTTTATTACGGCATGTAATCTACAGGCTCATATGCGCATTCATACGGGTGAAAAACCATTCGAATGTCAATATTGTGGAAGACGTTTTAGTGATCGCAGTTCGCATTTAAGACATGAAAGAATCCATACCAATGAAAAACCTTTCGAGTGTACCATTTGCCAAAAAGCATTTTCCCTAGCCACCACTTTAAAGAAACATATGAAAGTTCATTCCAGCGAGCGATCTTACAGATGTGATGCATGTTCCAAATCATTTAAGTTGCCACATCAATTAAAAGCCCACAAAAATACCACTTTACATAAAGCGGTAGAACATTTGAGTTCATTAGAAAATTGA
Protein Sequence: MEINITWNICRICLQEERKNVSGVEAIEPRMRNLFEENKKLAKYIYELTGIFMKPNDSLPDKICLKCLKMINNAIHFRKTCINSNAYLLNILERTQKASSLFKPEGVAESISDNELYDDDNDEEDEKMFVEEKNWHEIDVEHSNLEKHEKKKDNLDDDKHKECESNDSIENLDEIIEHFEDSSTPTDETCTITVENTTKDSIPNGKQGKEQNQQYSVDDEKKIKTNTTQLQKFLMNAKFNEVKETHKVKVDQRELYYLIEDMENESSNDKPDELKELDEAQLIMTDDNVEIYEIEEPEEENLMLHTEDENDENNQAQVTSTVDTNDEAIYSEENSQESNTSKDLEDIVSDNTSQKSAVLQSSKNNVTKSIKRKASTKHLGRVDASANVCDVCGNQFQNRAMLKLHMRIHNQERNHQCEICYKSFITACNLQAHMRIHTGEKPYECKYCGRRFSDRTSHIRHERTHTNEKPFKCSNCNKTFSLATTLQNHIKVHTNERSYRCEPCGKSFKLSHHLKTHENTSLHRSCKMEINITWNICRVCLKEEQKKPLGVTNEDAMRHLFNDDKLLAKQIFDCTGIKMKLNDGLPEKICKKCLTIVKHSANLRKTCRASDIYLQNLLERTKSASSLFKPQWQTEEDIEDDPLSCSTNDDEDDKQPETLKRKLAPLHKPSKKSCTTKNSEDSEINGNSDNEINSNSQTHDDVEENNLNHIVEEVLDSSESLTDHEQKIKTLNLQDFHINNDTEFVDTAESEIKYNNEQLYYVVKEELTENASPEQTQEHRDEINQHNLKTDDTEDENVQYVPFEEDENNVDECEIDEEQIIHLAESDIDDNQAQVSSTVDTKEDQGDFNVQMEEEEGEEEDVEEVQNSNLSTASNELQTEYIVDEYLVDDSSSNISTRSSSIVLLKAKTPNANRAKTILPERKTKPSGQIKAVASSSVGGMQVWVCDLCGNHFSNRQLLNIHMKIHRQEKNHECELCSKRFITACNLQAHMRIHTGEKPFECQYCGRRFSDRSSHLRHERIHTNEKPFECTICQKAFSLATTLKKHMKVHSSERSYRCDACSKSFKLPHQLKAHKNTTLHKAVEHLSSLEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -