Cruf005082.1
Basic Information
- Insect
- Chrysomya rufifacies
- Gene Symbol
- bab1
- Assembly
- GCA_014858695.1
- Location
- JACGTJ010001290.1:1260-9796[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-17 4.9e-14 51.7 0.0 1 43 645 688 645 690 0.95 2 2 9 1.8e+04 -5.1 2.6 6 14 785 796 781 806 0.65
Sequence Information
- Coding Sequence
- ATGGATTCATCACGACCTCTATCAAGAGCAGATAGCTCTCATGATCAATCATCTACAACTGTTAAAAAAGATAATGGTTCACCCTTAAGAGATACACAAGAGAAAAAGAGCAATTCACCACCACCAACCTCAAGACCTTCTTCAGTTTTACCTCATATTTTATCGTCTTTTGCCAGCAGTCCTACTAACAGCAGTCACACTAAAAGACAAACACCTGAACGCCGAGAAGAAGATCCTCCATTAAAATCTCCCCTTGGACTAACGGACACATCCCCTTCGACACCGATCTGTGGATTACCACCCTATTCACCGCAATCAGATAGATCTTCGTGTGGTTCAACTTCGGCGACTGCGCCTCAACAATTTTGTTTACGTTGGAATAACTATCAAAGTAATTTGACCAGCGTTTTCGATCAACTGCTGCAAAATGAAGCTTTCGTAGATGTTACTCTAGCATGTGATGGGCGTTCCATTAAGGCTCATAAAATGGTATTATCAGCTTGCTCACCCTACTTTCAAACTCTGTTCTCTACAACACCCTGTCAACATCCCATAGTCATAATGCGAGATGTCAACTGGTTTGAACTCAAGTCCATAGTGGATTTTATGTACAAAGGTGAAATAAATGTTAGTCAAGAGCAAATAGGTCCTTTACTAAGGATAGCAGAAATGTTAAAGGTTCGCGGTCTAGCAGATGTTGGTAATATTAGTAGTAGCTCCACAAACGCAACACAATTAAGTACTTTACAAACTTCCTCTAGTGAAAAGGACCTATATTCCTCGCAACCTCTATTAGAGTCGCCAAAAAGAAGGGAACTCTCCAACTCTCCCACAACGAAAAGACCTCCGAGCCAAACTTTGGAAACTGCACAGGAACATGGCGACACATCCGAAGACATTTCTTCACTCAATGAAGCTGAGAAAAAGAAACGCTTAGAAACCAGTGAATGGGATATAACGGGAACAGTAAAAACTTCCGATAGTTCCAATTTAGAATTAAGATTATCACCCCTGCAACATCAACATCTTTTGGGTAGAAATATAAGAAAACGTAGATGGCCGTCCGCTGATGCAATTTTTAATCCGCCCGAAAGTCCTTTAAGTAGTCTAATTGCTGCCGAAAGAGCTGAACAAGAAAGAGAACGCGAAAGAACGAGAGAGCGTGAAAGGGAGAAGGCTAGAGAAATATCACTGTTTACACCACCAATACCGGTTACCTCATGTTCTTCCGTTGGAGGTTCTGCAAGTCTAAATACTACAGCTTTAGAACCCACCGTACATATGGATATAACATCACCTTCTCCAACGCCTACTCCAAATTTATTACCTCCAGCTAGGACTCCTTCAGGCATGTTAACACCTTCACCTCATTTGCAGATCTCATCACATCATCATCACTCACACCAGTCGCATCGTTCTTCACCTGCCTCGTCTGTTACTTCAACACACCCGTCCAGTATTCTCAGTAGACCTTTAACACCCTCGCCAGCCAGTGTTAGTCATGCGGGTGTCGTTAGTCGTTTAGAGGGTGGACCCATGGCTGGAGAATCTTCCCACCGCTTTCCCATGGGACCAGCGCAAGCAGCTGCTATGGCCGCAGCAGCCGCTCAAATGGATTTAGGTGGTGCACCTTCATTGAGTATGAGACCACATTCATCTTCCGGTCCTTCCATGGGCGGAGGACAAACACATCACTCATCATCTTTAGTCGATGATTTAGAGATTAAACCAGGAATAGCCGAAATGATAAGAGAAGAAGAAAGGGCAAAAATGTTAGAAAATTCTCATGCCTGGATGGGAGCATCAGGATCATCAATAGCAGCAGACAGTTATCAATATCAATTACAGTCAATGTGGCAAAAATGCTGGAATACCAATCAAAGTTTAATGCATCATTTGCGATTTCGTGAAAGAGGGCCTTTGAAATCATGGCGTCCCGAAACAATGGCAGAAGCAATTTTTAGTGTACTTAAAGAGGGTCTATCACTATCGCAAGCAGCTAGAAAGTATGATATTCCCTATCCCACATTTGTTTTGTATGCAAATCGGGTACACAATATGTTGGGTCCCTCTATAGATGGTGGTCCCGATTTAAGGCCAAAGGGTAGGGGAAGACCTCAACGTATACTGTTGGGTATATGGCCAGATGAACATATCAAAGGTGTTATTAAAACGGTGGTCTTCCGTGATGCCAAAGATCTTAAAGATGAGGGTTTGGCTCATTTGCCTTATGGACGGCATTCGCCTGTTTTTCCATTTCAGGAGGGTTCTTTAAGTTATCCAGGAGTTGGAGCACAATGTCCAAATGGCATGCCTGGAGCAGCTGGTGATCAAATGTCACAGGAAGCCACAGCTGCGGCTGTAGCGGCAGTGGCCCATAATCTAAGGCAACAAATGCAAATGGCGGCAGCAGCCCAACAACAGCAACAAATGGGTGAGAGTCATGGTGGCCCAAATCTATTTAATCTTCCGCCTCATATGGCCAGTTGTGGACCGATGGGAGTTCCGCCGGGAACAGCAGGAGTACCTCTACCTAAAGCTAGTATCTCACCGGCCTTAAGTTCTTCATCAAATCCTGCTGGTTTAAGTTCCATGATGGGACCACGACATGTTCCTTCGCCCTGTGGTCCCAATTTACCGGGTATGCCTCAATTACCTCCCGGTATGGCGGCAGCTTTGCATATGGCCGGCAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACATTCAACATCTTTAGGACATTCATCTATCTCGGGAGCACCCTCACATACAATGATACATTCGTCTTTACAAAAATCTGCGACAGCATCTTCAACAAAACCACCTTCATCTTCAACTTCATCACCGTCCAGACGCAATAGTCCTCACAGTCTAACACCGCTACATTCTCCCCTAACAGAACTGGGCCTTGAAATGAGTTTTAAGCCCTCTCGCCCCTTCTCACCCTCAAGACTCTTTTCCGATGACATCTCCGATATTGTAGGTGTTGCTTCTGGCTCTCCCTTACGCTCACCTTCAACTTCACATCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTCCACGGGAATTAAACTCGAACCTATTACAACAAGTAGTGATTAA
- Protein Sequence
- MDSSRPLSRADSSHDQSSTTVKKDNGSPLRDTQEKKSNSPPPTSRPSSVLPHILSSFASSPTNSSHTKRQTPERREEDPPLKSPLGLTDTSPSTPICGLPPYSPQSDRSSCGSTSATAPQQFCLRWNNYQSNLTSVFDQLLQNEAFVDVTLACDGRSIKAHKMVLSACSPYFQTLFSTTPCQHPIVIMRDVNWFELKSIVDFMYKGEINVSQEQIGPLLRIAEMLKVRGLADVGNISSSSTNATQLSTLQTSSSEKDLYSSQPLLESPKRRELSNSPTTKRPPSQTLETAQEHGDTSEDISSLNEAEKKKRLETSEWDITGTVKTSDSSNLELRLSPLQHQHLLGRNIRKRRWPSADAIFNPPESPLSSLIAAERAEQERERERTREREREKAREISLFTPPIPVTSCSSVGGSASLNTTALEPTVHMDITSPSPTPTPNLLPPARTPSGMLTPSPHLQISSHHHHSHQSHRSSPASSVTSTHPSSILSRPLTPSPASVSHAGVVSRLEGGPMAGESSHRFPMGPAQAAAMAAAAAQMDLGGAPSLSMRPHSSSGPSMGGGQTHHSSSLVDDLEIKPGIAEMIREEERAKMLENSHAWMGASGSSIAADSYQYQLQSMWQKCWNTNQSLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDLKDEGLAHLPYGRHSPVFPFQEGSLSYPGVGAQCPNGMPGAAGDQMSQEATAAAVAAVAHNLRQQMQMAAAAQQQQQMGESHGGPNLFNLPPHMASCGPMGVPPGTAGVPLPKASISPALSSSSNPAGLSSMMGPRHVPSPCGPNLPGMPQLPPGMAAALHMAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHSTSLGHSSISGAPSHTMIHSSLQKSATASSTKPPSSSTSSPSRRNSPHSLTPLHSPLTELGLEMSFKPSRPFSPSRLFSDDISDIVGVASGSPLRSPSTSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTGIKLEPITTSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00331600;
- 90% Identity
- iTF_00331600;
- 80% Identity
- iTF_00331600;