Cruf011552.1
Basic Information
- Insect
- Chrysomya rufifacies
- Gene Symbol
- kn
- Assembly
- GCA_014858695.1
- Location
- JACGTJ010003419.1:1543-18563[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-233 1.6e-228 759.7 0.0 44 385 2 372 1 375 0.99 2 2 1.2e-10 2.2e-06 26.3 14.4 422 519 375 477 372 491 0.75
Sequence Information
- Coding Sequence
- AGTTTGGGTATTGGACGTGCACATTTTGAAAAACAGCCTCCTAGCAATTTGAGAAAATCAAACTTTTTTCATTTTGTTATTGCTTTGTACGATCGTGCTGGACAACCCATTGAAATTGAAAGGACTGCATTTATTGGTTTTATTGAAAAAGAATCCGAAGCGGATACAACAAAAACAAATAATGGCATACAATATCGTTTACAATTGTTATATGCAAATGGTGCCCGCCAGGAACAGGATATATTTGTGAGACTTATAGACTCCGTTACAAAACAAGCAATTATCTATGAAGGACAAGATAAAAATCCCGAAATGTGCCGTGTCTTATTAACGCATGAAGTTATGTGCAGCCGTTGTTGTGACAAAAAAAGTTGTGGAAACCGCAATGAAACACCATCAGATCCTGTCATTATTGATCGGTTTTTCCTAAAATTCTTTTTGAAATGCAATCAAAACTGTTTAAAAAATGCTGGCAATCCCAGAGATATGCGCAGATTCCAGGTTGTTATATCCACCCAAGTGAGTGTTGAGGGTCCTTTATTGGCCATATCAGATAATATGTTTGTACATAACAACTCGAAGCATGGACGTCGTGCTAAACGTTTGGATACAACGGAAGGTACAGGCAATTCCTCTCTGTCCATAACGGGGCATCCCTTAGCGCCTGACAGTACCTATGATGGTTTATATCCTCCCCTGCCTGTTGCTACGCCTTGCATTAAAGCCATATCTCCTAGTGAGGGTTGGACCACAGGTGGAGCTACTGTTATCATAGTGGGTGATAATTTCTTCGATGGGCTACAGGTTGTATTTGGCACCATGCTGGTGTGGAGTGAATTAATAACCTCACATGCCATACGTGTACAAACACCGCCCAGACATATTCCCGGAGTGGTAGAGGTTACTTTGTCCTATAAAAGCAAACAATTTTGTAAGGGATCTCCTGGGCGTTTTGTTTATGTTTCAGCCCTTAATGAGCCCACAATTGATTACGGTTTCCAAAGGTTACAGAAATTAATACCACGTCATCCTGGTGATCCAGAAAAGCTGCAAAAGGAAATTATTTTAAAAAGGGCAGCCGATTTAGTGGAAGCTTTATATTCAATGCCTAGATCCCCTGGTGGTTCGACTGGCTTCAATTCATATGCTGGCCAACTGGCCGTTAGTGTACAAGATGGTAGTGGCCAATGGACTGAAGATGACTATCAGCGTACACAATCTAGCAGTGTTAGCCCAAGAGGTGGTTATTGTAGCAGTGCTTCGACACCTCATAGTTCGGGCGGAGGCTCTTATGGTGCAACAACTACGGCGGCCACAAATGGTTATGGTGCTGCGCCCAATATGGGTACCTTATCTTCATCGCCCGGCAGTGTTTTCAATTCCACATCAACTTGTGCATTTTCGCCATTAATTCCAACAGTGTCCTCAACTTGGCATCAGGCTCTGGTACAACATCATCACACGCATCCACACCACTACCATCATCCGCATCAACCTTGGCACAATCCAGCCGTTTCAGCAGCAACAGCAGCCGTTTAA
- Protein Sequence
- SLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKESEADTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRTQSSSVSPRGGYCSSASTPHSSGGGSYGATTTAATNGYGAAPNMGTLSSSPGSVFNSTSTCAFSPLIPTVSSTWHQALVQHHHTHPHHYHHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -