Basic Information

Insect: Chrysomela aeneicollis
Gene Symbol: stc
Assembly: GCA_027562985.1
Location: JARUHR010000007.1:5874170-5885153[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 5.2e+04 -5.0 3.4 6 10 511 515 508 515 0.69

2 13 1.2e-06 0.031 15.8 11.6 3 18 557 572 553 573 0.95

3 13 2.2e-06 0.057 14.9 13.0 1 18 609 626 609 627 0.97

4 13 4.2e-10 1.1e-05 26.8 13.4 1 18 667 684 667 685 0.98

5 13 2 5.2e+04 -4.3 0.5 4 6 692 694 692 695 0.81

6 13 7.8e-08 0.002 19.6 15.0 4 19 732 747 725 747 0.87

7 13 1.5 4e+04 -3.7 2.0 5 10 776 781 776 781 0.93

8 13 0.047 1.2e+03 1.1 13.0 1 11 787 797 787 809 0.83

9 13 1.6e-09 4.3e-05 24.9 12.3 1 18 814 831 814 832 0.98

10 13 0.0041 1.1e+02 4.5 14.5 1 19 871 888 871 888 0.93

11 13 0.23 5.8e+03 -1.1 0.3 6 11 891 896 891 897 0.94

12 13 4.3e-05 1.1 10.8 15.3 1 18 924 943 924 947 0.91

13 13 0.00042 11 7.6 16.6 1 16 954 968 954 973 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	5.2e+04	-5.0	3.4	6	10	511	515	508	515	0.69
2	13	1.2e-06	0.031	15.8	11.6	3	18	557	572	553	573	0.95
3	13	2.2e-06	0.057	14.9	13.0	1	18	609	626	609	627	0.97
4	13	4.2e-10	1.1e-05	26.8	13.4	1	18	667	684	667	685	0.98
5	13	2	5.2e+04	-4.3	0.5	4	6	692	694	692	695	0.81
6	13	7.8e-08	0.002	19.6	15.0	4	19	732	747	725	747	0.87
7	13	1.5	4e+04	-3.7	2.0	5	10	776	781	776	781	0.93
8	13	0.047	1.2e+03	1.1	13.0	1	11	787	797	787	809	0.83
9	13	1.6e-09	4.3e-05	24.9	12.3	1	18	814	831	814	832	0.98
10	13	0.0041	1.1e+02	4.5	14.5	1	19	871	888	871	888	0.93
11	13	0.23	5.8e+03	-1.1	0.3	6	11	891	896	891	897	0.94
12	13	4.3e-05	1.1	10.8	15.3	1	18	924	943	924	947	0.91
13	13	0.00042	11	7.6	16.6	1	16	954	968	954	973	0.91

Sequence Information

Coding Sequence: ATGTCCTTCCAAGATGAACACCTTAATAGTGGTAGCTCATCTGGATACTATGAAAACTCCAGGAGTTCATTTTCCATGCCCAAAAACTCTGGATGTGCTACTCAGAGTAAAGATATGAGGTTTTCAACCCTGGAACCAACTGCTCAAGAATTCTACCCAAGTGATTTATCAAATTCACAGAGTGGAGCcatcaagaaaaaatcacaaaacaaTACCAAGAGTTCTGGTAGAGGAGGCAGGAGTAGATATGGAACTGGAAGAACATTCAGTGGACACAGAGGTGACTATTATGAATATGGCAATACCTACTCTGGAGAAGATCAAGGCATGAATAATTCTTCAACAAAGCATTATGTGAGAAAGTCATACAGAGAAAACAGGTATGCTGAGTCATCATCTTATAGTCAAGATAATTATAATGAACATCAAAGCTATAGTAATCATGATGTGTACAAAGCACAGAACCAAAGTAATAGGCCACAATCCTCTTCACAAGCACATCCTAATAGTTATGGTTATAGTAGAAGAAATGATTATGAAAAAGGGCAATCCTATAAAGGTGATATTCCTGAAGTATCATTGGATAATTTTTATAATTCAAATGGAAGCAAAAACTATAAGAAACAGGATAAAAGAAGATATGAAAAACCAAGGAATAACTTGGATGAATATAGTCATAGTAATGTTAAGGGGAGAAGCATTGATTTAGAACATCAGAAATATAAGGATGAGCCAAATAATTTATACAACAGGGAATGTCAAGATGCTCCAGAAAATACCCAAACAGTAAAGGTAAAAAATAGTGTATCTAACTCAAATTGGACCAAGAATTTTATCCCACAAAACAATAGAAGACACAATGAAGAAAATTTTGTAAAACCAATGAagaataaatataatgaaaaagacAACTTAGCTGATTCCAGAAATGATGTATCTAATCCAAATGAGGCCAAAAATTACAATTTCCAAAATTACACAAGACATGATAGgaattatgaaaaaccaggaaAATCAACCCCTGACAACAATGAAAGAATTAATGTAAAGTATGATGGTGGTTTAAGAGCTAAGAATAACTATGATAAATACTCCCATAATGGGAATAATGACTTCAAAGATATGCAGACTGCAGACAATGGTTACAGatcaagaaatttcaatgaTTATTCTGAGACAAGCAAAATAAAGAAGCCTTCTGATTATAGAAGGACTGATGTGAATAAATACTATGAGAGATACCAGAAACATGATCATGAAGGTCAACCACCTGATTGGAGAAAATCAAATGTTAGTAAAAGCAATACATCTGCTAAAAAGTACAACAAAAGAATGGACGCAGCCTCACAGAGAGAAAGGCTAGAAGAGATGCTAACCCACCGAACCCTCGAATGCCTCGTTTGCTGCGAGAAAATCAAACACTCCGACCGAGTCTGGTCTTGCATGCTCTGCTACAACATCCTCCACCTACACTGCGTGGCCTCATGGGCGAAATCCTCCAAGGTCGAGGAGAACTGGCGATGCCCCGCCTGTCAAAACGTCTGCAACGAGATCCCGCGCAAATACAAATGCTACTGCGGCAAGACGGTCGAGCCCAGATTCGATCCGGGGGCAGGCACAATACCGCACGGCTGCGGCGAGATGTGCCTGAGAAAGGGCCGCAACTGCGAACACAAGTGTACGCTGTTGTGTCACCCGGGGCCGTGTCCCGATTGCATCATCATGGTGGCCAAGGAGTGCGGCTGTGGGACCACTAAGCCGATCGTGAAATGCAGCACGGACATTGAGATTGTCTGCGAGGCGATCTGCGACAAGCTGCTCGAGTGTGGGCTCCACAACTGCCAACTGACGTGCCATTCGGGGGGCTGTGGGCTTTGCGAGAAAATGATCATCCAGGAGTGCTACTGCGGGAAACAGGGTAGAAAGGTCCCATGTCGTTTGGAATATAATGGTAGGGTCCAATATGAATGTGGAGATGTCTGTGGGAAGATGCTGGCTTGTGGAAATCATAAATGTGAGTTGGTGTGTCATGAGGGTCCATGTGGGACCTGTGTAAGGGACATTGAAGTGGTGCATACTTGTCCTTGTGGAAAGAATGAGCTGAAGGAAAAGAGGGTGTCTTGTTTGGACCCAATTCCTTGCTGTGATAAGCTATGTGGTAAATCTCTCAAATGTGGACAACCCAGTTCTCCACACAAATGTGAACAATACTGTCATGAAGGAGACTGCCCTCCTTGTCCATTAACAACATTGGTACGATGTCGTTGCGGTCATATGGACAAAGAGATACCTTGTCAGAAGTTGACTACAAAAGCTGATGATGCCAGATGTGAGAAAAAATGCACCAAGAAACGCCTGTGCGGCAAGCACAAGTGCAACCAGCGGTGCTGCATCGAGGTGGACCACGCGTGCCCGCTGCCCTGCGGGCGGCAGCTAGCGTGCGGGCGGCACCGGTGCGCGCTCACCTGCCACTCGGGCCGCTGCCCGCCGTGCGCTGAGGCGAGCTTCGAGGAGCTGGCGTGCGAGTGCGGCGCCGCCGTGCTGTTCCCGCCGGTGGCGTGCGGCACCAGGCCGCCCGCGTGCGGTGAGCCGTGCTCGAGGCAGCGCCAGTGCGGCCACGAGCCGAACCACGCGTGCCACCAGGGAGCGTGTCCGCCCTGCACGGTGCTGTGCAAGAGATGGTGCCACGGTCGGCACGAGCAGCGCCCCGCCATCCCGTGCCACCAGGAGGCGTTCGGGTGCGGGCGGGCGTGCGGCGCGCCTGCGCCGTGCGGCCGCCACCGGTGCGCCCGCCCGTGCCACGCCGCCGGCGGCTGCCCGTCGACCTGCGAGCTGCCCTGCGCCGCCCCGCGCGCTGCCTGCGGCCACCCGTGCGCGCGGCCGTGCCACGCCGGCGCCTGCCCGGGCGGCGGGTGCACGCACGCCGTGCGCGTCGAGTGCCAGTGCGGCGTGCAGAAGGCCACCAGGCCGTGCATCGAGGTGGAAGGTGAATTTAGGAACTTGCAGATGTCTCAAATGAAGGATAAAATGGGAGAGCTGTCTAACAATCAATCAGTCAATATTTCGGATATTTCAACTGCCCTGAAAATGCCTGCTGTTCTTAAAATATTGGAATGCACCGAAGAATGCCGAGTCCTCGAACGCAACCGTCGGTTGGCCATAGGCCTCCAGATCCGCAACCCCGACCTGAGCCAGAAACTGACGCCCAGGTACTCAGACTTCATGCGTCAGTGGGCCAAAAAGGACCCCCATTTCTGCCAACGCGTCCACGACAAGCTGACAGACCTTGTCCAGCTGGCCAAGGCCAGCAAGCAGAAAAGTCGCGCCTACTCGTTTGAATCTATGAACAGGGACAAGCGCCACTTCGTGCACGAGTACTGCGAGCACTTCGGCGTTGAAAGCGCCGCGTACGACTCGGAGCCGAACCGCAACGTGGTCGCGACCGCCCTCAAGGACAGGTCGTGGCTGCCGGGCGCCGGCTTGCTGGAGGTGGTGCGCCGCGAGAGCGGGCAGCGCAAGGTGCCCGGCCCGGTGCTGGGCGACAGCAGCGGCTCGGGCAGGCGCGAGACGGTGTCGCTGCGGCTGCCCGGTCGGCCGCCCAAGGCGGGATCGCCGCCCGCCGACGCGGTCGACCCGTTTTCTTAG
Protein Sequence: MSFQDEHLNSGSSSGYYENSRSSFSMPKNSGCATQSKDMRFSTLEPTAQEFYPSDLSNSQSGAIKKKSQNNTKSSGRGGRSRYGTGRTFSGHRGDYYEYGNTYSGEDQGMNNSSTKHYVRKSYRENRYAESSSYSQDNYNEHQSYSNHDVYKAQNQSNRPQSSSQAHPNSYGYSRRNDYEKGQSYKGDIPEVSLDNFYNSNGSKNYKKQDKRRYEKPRNNLDEYSHSNVKGRSIDLEHQKYKDEPNNLYNRECQDAPENTQTVKVKNSVSNSNWTKNFIPQNNRRHNEENFVKPMKNKYNEKDNLADSRNDVSNPNEAKNYNFQNYTRHDRNYEKPGKSTPDNNERINVKYDGGLRAKNNYDKYSHNGNNDFKDMQTADNGYRSRNFNDYSETSKIKKPSDYRRTDVNKYYERYQKHDHEGQPPDWRKSNVSKSNTSAKKYNKRMDAASQRERLEEMLTHRTLECLVCCEKIKHSDRVWSCMLCYNILHLHCVASWAKSSKVEENWRCPACQNVCNEIPRKYKCYCGKTVEPRFDPGAGTIPHGCGEMCLRKGRNCEHKCTLLCHPGPCPDCIIMVAKECGCGTTKPIVKCSTDIEIVCEAICDKLLECGLHNCQLTCHSGGCGLCEKMIIQECYCGKQGRKVPCRLEYNGRVQYECGDVCGKMLACGNHKCELVCHEGPCGTCVRDIEVVHTCPCGKNELKEKRVSCLDPIPCCDKLCGKSLKCGQPSSPHKCEQYCHEGDCPPCPLTTLVRCRCGHMDKEIPCQKLTTKADDARCEKKCTKKRLCGKHKCNQRCCIEVDHACPLPCGRQLACGRHRCALTCHSGRCPPCAEASFEELACECGAAVLFPPVACGTRPPACGEPCSRQRQCGHEPNHACHQGACPPCTVLCKRWCHGRHEQRPAIPCHQEAFGCGRACGAPAPCGRHRCARPCHAAGGCPSTCELPCAAPRAACGHPCARPCHAGACPGGGCTHAVRVECQCGVQKATRPCIEVEGEFRNLQMSQMKDKMGELSNNQSVNISDISTALKMPAVLKILECTEECRVLERNRRLAIGLQIRNPDLSQKLTPRYSDFMRQWAKKDPHFCQRVHDKLTDLVQLAKASKQKSRAYSFESMNRDKRHFVHEYCEHFGVESAAYDSEPNRNVVATALKDRSWLPGAGLLEVVRRESGQRKVPGPVLGDSSGSGRRETVSLRLPGRPPKAGSPPADAVDPFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -