Basic Information

Insect: Chrysomela aeneicollis
Gene Symbol: -
Assembly: GCA_027562985.1
Location: JARUHR010000004.1:11764976-11773411[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0061 0.92 11.6 2.5 4 20 1598 1614 1598 1616 0.90

2 14 9e-06 0.0014 20.5 3.0 1 23 1621 1643 1621 1643 0.97

3 14 2.1e-05 0.0032 19.3 2.1 1 23 1649 1671 1649 1671 0.98

4 14 1.9e-05 0.0029 19.4 4.8 1 23 1677 1699 1677 1699 0.98

5 14 0.00011 0.016 17.1 6.8 1 23 1705 1727 1705 1727 0.97

6 14 6.5e-07 0.0001 24.0 3.3 1 23 1733 1755 1733 1755 0.97

7 14 0.00022 0.034 16.1 4.7 1 23 1761 1783 1761 1783 0.97

8 14 0.00052 0.079 14.9 3.9 1 23 1789 1811 1789 1811 0.98

9 14 0.0003 0.046 15.6 6.7 1 23 1817 1839 1817 1839 0.98

10 14 0.0002 0.031 16.2 1.8 1 23 1845 1867 1845 1867 0.98

11 14 0.00015 0.023 16.6 4.8 1 23 1873 1895 1873 1895 0.96

12 14 4.5e-05 0.0069 18.2 7.8 1 23 1901 1923 1901 1923 0.98

13 14 1.2e-05 0.0019 20.0 1.9 1 23 1929 1951 1929 1951 0.98

14 14 0.99 1.5e+02 4.6 0.0 5 17 1961 1973 1959 1974 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0061	0.92	11.6	2.5	4	20	1598	1614	1598	1616	0.90
2	14	9e-06	0.0014	20.5	3.0	1	23	1621	1643	1621	1643	0.97
3	14	2.1e-05	0.0032	19.3	2.1	1	23	1649	1671	1649	1671	0.98
4	14	1.9e-05	0.0029	19.4	4.8	1	23	1677	1699	1677	1699	0.98
5	14	0.00011	0.016	17.1	6.8	1	23	1705	1727	1705	1727	0.97
6	14	6.5e-07	0.0001	24.0	3.3	1	23	1733	1755	1733	1755	0.97
7	14	0.00022	0.034	16.1	4.7	1	23	1761	1783	1761	1783	0.97
8	14	0.00052	0.079	14.9	3.9	1	23	1789	1811	1789	1811	0.98
9	14	0.0003	0.046	15.6	6.7	1	23	1817	1839	1817	1839	0.98
10	14	0.0002	0.031	16.2	1.8	1	23	1845	1867	1845	1867	0.98
11	14	0.00015	0.023	16.6	4.8	1	23	1873	1895	1873	1895	0.96
12	14	4.5e-05	0.0069	18.2	7.8	1	23	1901	1923	1901	1923	0.98
13	14	1.2e-05	0.0019	20.0	1.9	1	23	1929	1951	1929	1951	0.98
14	14	0.99	1.5e+02	4.6	0.0	5	17	1961	1973	1959	1974	0.91

Sequence Information

Coding Sequence: ATGTCTGAACATCTGAGAAGATCGACGAGGATGAATGCTGGTAGAACAAGTTATTATGATGAGTTTTTAACACAATTACCTGGCAATCGTAGATCTAACGAACGTAATGTAGAAAAAGTTCAGTCTGAAAGTAATCTCAGAATATCCAGGGAAAATGTACGTTATGTCGAAGACAGTCGATCTGAAAGAAACCATGTTTTACTTCGTAAAGAGGCTGGATCAACGAATCAAGCTGGGATTTCTTATGAATCTGTAAGGAATGTTGAAGCACAACCGATAGTAGAGTGCACAACAAATATATCAGCAGATAGGTGTTCCCAGAAGAAATCGCAGAAATCCAAGACTTCATCGAAGAGGGTTGAATTTGAGAAGAGACGTTTGGCGTTGGAGGCTGAGGTTACAAGGACAGAGTTGAGGATGAGACAACAAGAACTGGACAATCAGATGAGGATTTTTGAATTACAGACGAAACTAGCAGAGAATAGgatagaagaagaagaggaagccAGTTCTAGAGGATCAATTGAAGACATTTATGAAACAAAGAAGGTGGATGTACAAAACTGGATAGATGAGTATACCGTTCACCATTCTGCAGtatcaaatcttgaaaatgAACGAGAAAGGTCTTCAATGACacatgaaaatgacaatttgtcaaAATTATGCAATGTAATTGCCGATGCTATAAAGAGTGTTTCTGCGAGAAGTAATAATGGTGTCGCTCAAGAAAAAATAGACAAGAGCTTTCCATTCTTCGATGGAAGGGCAGATAGCTGGCCTTTATTCATAAGTCaatttgatagaaaaaaatcaatgtataAATATTCAGAAGATGAATTGACAATGCAACTACAGAAATGCTTGAAAGGAGAGGCTATGGAATCGGTAAGGAGTTTATTACTTCAtccaaaaaataatgataaagtAATTGAAACTTTGGAAATGCGATTTGGTCGCCCAGAATATATTATTGGTTCATTAATAGATAAAATACAGAGCTTATCTGCAGTTAAAGAAGGTGATTTTAATGCATTGATTAAATTTTCATGTCATGTGAATAACTTGGTAGCAACGTTGGAAAAATTCGAAGCTGAGAATCACCTGGGCAATCCAATCCTATTGGAGCAGTTAGCAGCTAAGATACCAAATAGCCTAAAGTTACAATGGGGACATATCATTGTACAGAAGAAAGGACCAGATTATCTCAGTTTGCTTCCTGGTGTACTCATGCGCTTCAGACGTTCAAAATGGGGCTTTTGTGGAGATATCACTGAAATGTTTCACCAGATAAAGATTCGCAAAGAAGATAGATGTGCGCAACGGTTTCTCTGGCGGAATGGCAACCCGAATGTGAAGGCTGTTGTCTATGAATTGCAAGTAATGATGTTTGGTGCTTCTTGTTCTCCATGTTCCGCTCAGTACGTTAAAAATTTGAATGCTGCGCAATCTAAATATCCTGAATTGTCTAGAGATGTAGAACTTAACTTTTATGTCGATGATTATTTAGATTCTTGTCCTACAGAACAAGAAGCACTAGAAAAGATTGAGAAGATGATTGAACTTCACAAAGATGGGGGTTTCAATATTGTTGGGTGGTCTTCTAATTCTCCATTAGTGGCTGAGAAATATGGCATCGGACTTTCTGAAAAAGGTTTCAATAAATCAACATCTGAAAGAATCCTAGGTATATGGTGGGATGTGAAAAATGACGAATTCGTATTCAAAATTAATTTCCACAAAGTCTCCACAAAAATAGCAAGTGGTGAAGCTATTCCTACAAAACGACAAGTACTCCAATTGGTGATGTCAATTTTCGATCCACTAGGATTTTTAACTTGTCTGACTATCAAAGGAAGAATCTTTCTTCAACAAATATGGCGTAGTGGTATTGGCTGGGATGATTCAATTCCATTTAAAATTCAAGACACCTGGATAATGTGGTTAAAATATCTTGAATTGATTCCTTCAGTTCACATAAGTCGTTGTTATTCTCCATCATTATCGTCTTCGTTAGAAAATGAAATCCATGTTTTTTGCGATGCCAGCGAAGAAGCTTTTGCAGCGATTGCCTATCTGAGAATTATTTTGACAAGTCATGTAGAAGTATCATTCATTTCTTCTAAAGCAAGAGTTGCCCCGCTGAAGCCGATTTCGATCCCTCGATTAGAACTTCAAGCTGCTGTATTGGGTAGTCGTTTACTGAAAACCATTTTGAGTGAGATAAATATTCCAATTAGTGGTTTGTATTTATGGAGTGATTCCCGAACTGTTTTATATTGGATTCAAGGGGACGGTAGGAGTTACCCACAATTTGTTGCTCATAGGGTTGGAGAAATTCAGGAGACAACAGCTTCGGCTCATTGGAGATATGTACCCACCAAATTGAACGTAGCAGATGAAGCAACTAGATTTATAAATACAAACAATGAAGTTATGAGCAATAGATGGCTCAATGGTCCAGATTTTTTACGGAATTCCAGTGATTGGCCGATTGAAATTGATCTGAATGATTTCAAATTGGACGAAGATAATGAAAAGAAATCTACTGAACAGTTTGTGGGAATCATTATCAATAAAATGGATCATGTACCAGATGTGACACGATTTTCAAAATGGAGAAAATTTATAAGGTGTTTGGCTTGGGTCATGAAGTTCTATAGACGTTTACTTGGAAAGGTTAGAAAAGGAGTAGAACAATTTTCTGAAGAATTAACAGTTGTAGAAATTAGCGAAGCCAAACGAATATGCATAAGAAAATGTCAAGAGGAGAGCTTTGGAAATGATATGAAGCAACTCAGAGAAAAGGGTCAGGTAGAAAAATGTAGTAGACTCTTGAAACTCTCACCATTTGTTGATGATGATGGCCTTTTGAAAATGCGAAGTAGAGTATGTAATGCTCTTTGTTTGAATGAGTCAGTCAAAACGCCTATTATATTGGACCCCAAAAACAAGATTTCCATGCTTTTAATTTCCTATTATCATGAAAAATGTCACCACCAAGGAAAAGAAATGATTTTGAATGAGCTTCGTCAGGAATACTGGATCATCAAGGGACGACAAGCTGTTAAGGATTCATTCAAGAGATGTCAGTATTGCAAAGTGAAGAATGCAAAACCAGGTACTCCTCGAATGGGCGACTTACCTGAAATACGACTAACTCCAGGAATGAAACCATTCACTTTCGTTGGTATCGATTATTTTGGTCCATTATTTGTCACAGTTGGACGGCATAGAGAAAAACGGTGGGGAGTATTATTTACTTGTATGACAATCCGTGCGATTCATTTGGAAATTGCATATTCTCTTACAACCGATAGTACTATCATGGCAATCAGAAGGATGATTTCTCGACGTGGACCCATCAGGCACCTTTATTCGGACAATGGTAGCAACTTCAAAGGAGCGAATGAAGAACTCAAGAAATTCTATAAAGAATTGCATAAGAACGTGATATTCAATGAGTTAACAGAGATGGAAATAGAGTGGCACTTTATTCCGCCAATGACTCCAAACATGGGTGGATGTTGGGAACGTCTCATCGGATCCGTGAAGAAAATTCTGCAGGTTACTCTTAATGAAGAAGCCCCGAAAGATGAAGTTCTTTATACCCTATTCATAGATGCTGAGAATATTGTTAACAGTAGACCTCTCACACATGTCTCAGAAGATCCTTGTGACCCTCAGTGTTTAACGCCGAACCATCTTCTAATTGGTTCACCATCCAAGAATCCTTTTCCGATACCATTCGGAGAACAAGATTTGCGGAAACAATGGAAGAAGTCTCAGAGGTTGTCAGAAATATTTTGGTTCAGGTGGATCAAAGAATACTTGCCAACTTTATCCCGACGAGCCAAGTGGAATCAAGATGGTAAATCAGTTGCTGTTGGAGATGTTGTTGTGGTAATTGATGGCAGTTTACCACGGAATTCTTGGCCACTTGGAAGAATAAAGGCAGTTTTTCCTGGAAAGGACGACATTGTTCGAGTGGTGGAAGTACAAACATCAACTGGATTGTACAAGCGACCGGCGTTACAAACAATCATGAATCCTTGCATATGTGAAAACTGTATAAATATGCTGGACAATCTATACAGTTTTGCTTCCCAATGCAAAAGTAGCACTAATATAATGAAGACGAACGGTGCCGTTAAAATCCTTAGTGTCGAAACTTCGACAGACGATACTAAAATCAAGGTCGAAAACCAGTTCGACAAAGAGTGCAAGATAGAAATGAACGAGAATCCTATAGACTATGTGGAATATGATGTTGAGAGATCTCTTCAACGCACCCCGAATTCGGATAGGtatataaaaaaagaagaagaagaagcagACAGTGATCTGTCTTCAGCAACCAACGAATCCAATTTCAGAATCATAACCCTCCAAGATAGGCTCGAGAACCAATGTCCATTAGAAGACTCAATGAAACCGATTCCATGCGACAGCTGCCTGAATTTATACAACAGCCACGTCGATTTGGCTTTACATTCGATCAATCACAGTGATAACAGCACGTACAGCTGTCACGTTTGCAAGAACTATGCGAATGCCGAGAAGAACCTCATGGTGATGCACATAAATGCTCACGAAGGAAAAGAGATCGTAGTTAATTGCGATTATGGTAGCGACGTGGACTCTTCCTTGATCAAAGAGCACTTGAGCATTAGCACGAGCCAAACGTTCGGTATAGAGCCAATGTTGATCGAACATTACAAACAAGAGCATGGTCACGAGTTTTCTACAGAGTCGTCTTTGAACCTGAATATTCCTATTCCTATGGAAGAGAAGCATTGTGGAAAGGGGTTCTCTCAGAAGTCGCATTTGAACGACCACTCTCACACAGGGGAGAAGCCTCACATTTGTTCGCATTGTGGAATAAGGTTTTCTCGAGTTTCGTCTTTGAATGTTCACCTACGTACTCATATGGGGAAGAAACCGTATATCTGTGCTCATTGTGGAAAGGGGTTTTCTCTGAAGACAAATTTGAACACTCACTCGCGTACTCACACGGGGGAAAAACCTTTTATTTGTTTGCATTGTGGGAAGGGTTTTTCTAGAAAGACCCATTTGAACATTCATTCGCGTACTCATACGGGAGAGAAGCCCCATATTTGTTCACACTGCGGAAAGGGGTTCTCCCTAAGGACGCATTTGACCACTCATTTGCGTACTCATACGGGGGAAAAGCCTCATATATGTTCGTATTGTGGGAAGGGGTTCTCTCAAAAGGCGCATTTGACCATCCATCTGCGTACTCATACGGGGGAGAAACCTCATATCTGTTCGCTTTGTGAAAAGGGGTTTTCTAGAAAGACACATTTGAACATTCATTCGCGTACTCATACAGGTGAGAAGCCGTATATTTGTTCGCATTGTGAAAAGGGGTTCTCTGTGAAGTCGCATATGAACGAACACTTGTACACTCATACGGGGAAAAAGCCTTATATTTGTTCGCATTGTGGAAAGGGGTTCTCTCTGAAGTCGCATTTCAATGACCATTTGCACACTCATACGGGAGAGAAGCCGTATATCTGTGATCATTGTGGAATGCAATTCTTTGGAAGGTCGAATCTAAACTACCACTTGCTCACTCACAAGAAAGAGAAACCCCATATTTGTTCTCAGTGTGGAAAGGGGTACTCTCAGAAGTCGCATTTAAACGACCACCTGCACATTCATACAGGGGAGAAACCCTTCGTTTGTTCGCATTGTGGAAAGGGATTCACTCGGAAGGAACACTTGAATTGTCACATGCGTACTCATACAGGGGAGAAGCCGTATATTTGTGCGCATTGTGGGAAAGGGTTTACTAAAAAGACGAATTTGGACTCTCACTTGAATACTCATACGGATGAAAAGCTTCATATTAGTTTCCATTGTGGTGAGGGATTCTCTCAAAAAGAAAATTTAATTACTCCTGTACTCATATGA
Protein Sequence: MSEHLRRSTRMNAGRTSYYDEFLTQLPGNRRSNERNVEKVQSESNLRISRENVRYVEDSRSERNHVLLRKEAGSTNQAGISYESVRNVEAQPIVECTTNISADRCSQKKSQKSKTSSKRVEFEKRRLALEAEVTRTELRMRQQELDNQMRIFELQTKLAENRIEEEEEASSRGSIEDIYETKKVDVQNWIDEYTVHHSAVSNLENERERSSMTHENDNLSKLCNVIADAIKSVSARSNNGVAQEKIDKSFPFFDGRADSWPLFISQFDRKKSMYKYSEDELTMQLQKCLKGEAMESVRSLLLHPKNNDKVIETLEMRFGRPEYIIGSLIDKIQSLSAVKEGDFNALIKFSCHVNNLVATLEKFEAENHLGNPILLEQLAAKIPNSLKLQWGHIIVQKKGPDYLSLLPGVLMRFRRSKWGFCGDITEMFHQIKIRKEDRCAQRFLWRNGNPNVKAVVYELQVMMFGASCSPCSAQYVKNLNAAQSKYPELSRDVELNFYVDDYLDSCPTEQEALEKIEKMIELHKDGGFNIVGWSSNSPLVAEKYGIGLSEKGFNKSTSERILGIWWDVKNDEFVFKINFHKVSTKIASGEAIPTKRQVLQLVMSIFDPLGFLTCLTIKGRIFLQQIWRSGIGWDDSIPFKIQDTWIMWLKYLELIPSVHISRCYSPSLSSSLENEIHVFCDASEEAFAAIAYLRIILTSHVEVSFISSKARVAPLKPISIPRLELQAAVLGSRLLKTILSEINIPISGLYLWSDSRTVLYWIQGDGRSYPQFVAHRVGEIQETTASAHWRYVPTKLNVADEATRFINTNNEVMSNRWLNGPDFLRNSSDWPIEIDLNDFKLDEDNEKKSTEQFVGIIINKMDHVPDVTRFSKWRKFIRCLAWVMKFYRRLLGKVRKGVEQFSEELTVVEISEAKRICIRKCQEESFGNDMKQLREKGQVEKCSRLLKLSPFVDDDGLLKMRSRVCNALCLNESVKTPIILDPKNKISMLLISYYHEKCHHQGKEMILNELRQEYWIIKGRQAVKDSFKRCQYCKVKNAKPGTPRMGDLPEIRLTPGMKPFTFVGIDYFGPLFVTVGRHREKRWGVLFTCMTIRAIHLEIAYSLTTDSTIMAIRRMISRRGPIRHLYSDNGSNFKGANEELKKFYKELHKNVIFNELTEMEIEWHFIPPMTPNMGGCWERLIGSVKKILQVTLNEEAPKDEVLYTLFIDAENIVNSRPLTHVSEDPCDPQCLTPNHLLIGSPSKNPFPIPFGEQDLRKQWKKSQRLSEIFWFRWIKEYLPTLSRRAKWNQDGKSVAVGDVVVVIDGSLPRNSWPLGRIKAVFPGKDDIVRVVEVQTSTGLYKRPALQTIMNPCICENCINMLDNLYSFASQCKSSTNIMKTNGAVKILSVETSTDDTKIKVENQFDKECKIEMNENPIDYVEYDVERSLQRTPNSDRYIKKEEEEADSDLSSATNESNFRIITLQDRLENQCPLEDSMKPIPCDSCLNLYNSHVDLALHSINHSDNSTYSCHVCKNYANAEKNLMVMHINAHEGKEIVVNCDYGSDVDSSLIKEHLSISTSQTFGIEPMLIEHYKQEHGHEFSTESSLNLNIPIPMEEKHCGKGFSQKSHLNDHSHTGEKPHICSHCGIRFSRVSSLNVHLRTHMGKKPYICAHCGKGFSLKTNLNTHSRTHTGEKPFICLHCGKGFSRKTHLNIHSRTHTGEKPHICSHCGKGFSLRTHLTTHLRTHTGEKPHICSYCGKGFSQKAHLTIHLRTHTGEKPHICSLCEKGFSRKTHLNIHSRTHTGEKPYICSHCEKGFSVKSHMNEHLYTHTGKKPYICSHCGKGFSLKSHFNDHLHTHTGEKPYICDHCGMQFFGRSNLNYHLLTHKKEKPHICSQCGKGYSQKSHLNDHLHIHTGEKPFVCSHCGKGFTRKEHLNCHMRTHTGEKPYICAHCGKGFTKKTNLDSHLNTHTDEKLHISFHCGEGFSQKENLITPVLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -