Basic Information

Insect: Chrysomela aeneicollis
Gene Symbol: -
Assembly: GCA_027562985.1
Location: JARUHR010000002.1:26451026-26492595[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.7e-05 0.0057 18.5 0.7 1 23 161 183 161 183 0.95

2 15 0.0017 0.25 13.3 1.2 3 23 191 211 190 211 0.99

3 15 0.00018 0.027 16.4 0.6 1 23 315 337 315 337 0.98

4 15 0.0067 1 11.4 0.2 1 23 344 367 344 367 0.95

5 15 2.5e-07 3.8e-05 25.4 3.1 1 23 391 413 391 413 0.98

6 15 0.009 1.4 11.0 0.0 1 23 426 448 426 448 0.95

7 15 0.51 77 5.5 0.0 1 23 454 477 454 477 0.94

8 15 0.071 11 8.2 1.9 2 19 485 502 485 503 0.96

9 15 0.00032 0.048 15.6 3.6 1 23 512 534 512 534 0.97

10 15 0.0025 0.38 12.8 0.3 2 23 540 561 539 561 0.97

11 15 1.2e-05 0.0018 20.1 0.4 1 23 570 592 570 592 0.98

12 15 0.0052 0.79 11.8 0.2 3 23 600 620 598 620 0.97

13 15 0.00017 0.025 16.5 0.3 1 23 626 648 626 649 0.95

14 15 0.098 15 7.7 1.8 1 23 663 685 663 685 0.96

15 15 0.0016 0.24 13.4 0.0 1 20 1076 1095 1076 1098 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.7e-05	0.0057	18.5	0.7	1	23	161	183	161	183	0.95
2	15	0.0017	0.25	13.3	1.2	3	23	191	211	190	211	0.99
3	15	0.00018	0.027	16.4	0.6	1	23	315	337	315	337	0.98
4	15	0.0067	1	11.4	0.2	1	23	344	367	344	367	0.95
5	15	2.5e-07	3.8e-05	25.4	3.1	1	23	391	413	391	413	0.98
6	15	0.009	1.4	11.0	0.0	1	23	426	448	426	448	0.95
7	15	0.51	77	5.5	0.0	1	23	454	477	454	477	0.94
8	15	0.071	11	8.2	1.9	2	19	485	502	485	503	0.96
9	15	0.00032	0.048	15.6	3.6	1	23	512	534	512	534	0.97
10	15	0.0025	0.38	12.8	0.3	2	23	540	561	539	561	0.97
11	15	1.2e-05	0.0018	20.1	0.4	1	23	570	592	570	592	0.98
12	15	0.0052	0.79	11.8	0.2	3	23	600	620	598	620	0.97
13	15	0.00017	0.025	16.5	0.3	1	23	626	648	626	649	0.95
14	15	0.098	15	7.7	1.8	1	23	663	685	663	685	0.96
15	15	0.0016	0.24	13.4	0.0	1	20	1076	1095	1076	1098	0.94

Sequence Information

Coding Sequence: ATGGATGAGTCTTTTGGGTTAGCATGGGAGGATTCCAATACTGTTGTTCAGACAGAAGAGGTCATCTGCGGCATTGAGAATGAAATCCTCCCAGCAGAGTCAGTGGAATTCACAGGGGTACCCGAAGAAGTTGCAGAAGAGGTGGTGGAAGCAACAGAAGAGGTTGTACAGGATGATGCCCCCATTATGTATCTAACTGACGAAAATATGTTGGTGGTAAATGAACAGACAGAGCAGTTCAATCAAGAGCATCTCATGGATTGCCAAGTAACTGAAGAAGTCATCACTGAACAATGGGGAGAGGGCTGTCCAGAAGAAATAGACGCCCCATCGACCGCCCTCAAAATAACCGCTCCCCCCCTCACCTCTCCTCTATCCCCAGTGGTGGGGTCAGAGGAGGCCGTGGACGGCACTGAGACGGGCGGCGACTGCGACGTACCGCTGCCCACCGATCAGGATGAGTACACGGCCGCCCGCCCCTACCCGTGCGACTTCTGCAGCCGGCGGTTTCGCAAGAAGGCCAACCTGATGAACCACATGGTGGCCCACCAGACGGACAGGCCGCACGGGTGCAACTTGTGCGGCGTGCGGTATATCCGGAAGTGCGATCTGATGAACCATCTCAAGATCCATGCTTATATCCCGGAAGCAGATGGTCTGGAAGACGAAGAACTGCACACTATAGAAGAATTCGCCCAGCACGACAAGAAGAAGAAAGCCAAGCAAGTGGTGAAGCGGAGGAAGAAGAAGATCAAAGAGGAATTCGATCAATTTGAAGTGGAAGCAGAAGCCTCCGGCTCCCGAGGCTACAACTACGAGGAACACGAGGGGAAAATCATGGACCCGATAGGAAACAGCAAAGACGACTTCGACTACGAGGGGCAGCCGGAACAGTCCGGGGAACTGGAACACCGCTTCCCCATCACGGACCCCAAGAAGCCGTTCGTCTGCCAACACTGCGGCGTCGGTTTCGCCAGGGAGAAGGCGCTCTCGTCGCACACCAGGTTGCACTCGGAAGGTGACAGCCCCTTCGAATGTCAAAAGTGCGGGGAAATGTTCTGGGACCCGGGGCAGATGAGGGGGCACATGAAAGACAAGCACGGCGACCTGGATGACTTCGATGACGATGAAGATGAGGATTACTCGGAGGAGGACAGCAAATATGGGACCTTCTATTGCACCATTTGTGGGTTGTCCTTCCATAGGCAGGACAACCTTCGCCGGCACCAGCGCGTCCACATCAAAGAGGAGTACGTGAACGAGCACGAGTTCGGCCACGTGTGCAACGTTTGCGGGGAGTCGTTCCAGGAGGCGCTCGACCTGCTGGCCCATGCCGAGGTGCACGCCAGGTCGGTCGACTTCAGGTGCATGATTTGTGGCGATAGCGCCGCCGACGAGAGCGCTCTGGCGGTGCACGTCCAGGCCAAACACGGTAAAAATCTGCCCCCTAACACATGCATGTTGTGCGGACGTTCTTGCAAAGATCGCCGTACTTTGCTGAAACACTCCTGGGAACATTCTAAGGAGAAGGTGTTCGCGTGCAGCAAGTGCGCCAAGACGTTCCACAACAAGGCACGCCTGAAGCGGCACATGCTGTCGCACCGCAGCAAGGCGGTGCAGTGCGACGTGTGCGGCGAAGAGTTTCCCGATGGCCGGTCGCTCATGAACCATCGGCACAGTCACAGCAGCGTGTCGGGTGGCAGGCAGTTCCCGTGCCGCGAGTGCGGCAAAACGTTCGGTTCGCGCAGCTCGCAGCAGATACACATTCGGATACACACCGGCGAGCGACCGTACGGCTGCCGGTTCTGCTGGAAGGCGTTCGCGGACGGCGGGACCCTCCGCAAGCACGAGCGCATCCACACCGGTGAGAAGCCGTACGCGTGCGCCGTGTGCCCCAGGGCGTTCAACCAGCGCGTCGTGCTCAGGGAGCACATCCGGTCGCACCATTCCGGCCCGGATCCCAAATACACCAACAGCATGACCCCTTATTGCTGTTCCGTGTGCTCGGACATGTTTGCCACCTCTCAGGACCTGATCCTTCACCTGATCCACCACTGCGACATGAACACGGCCATGAAGAGGCAGCCGCAGATCGGCCCCAGGAAGTACAAGCGCAGGAGGAAGCTGAAACCGCACGAGCTGGAGATGATATCGAACAGGGCGGAAGAAGAAGATAATGGACACACAGAGGATATGGCCGATAATTTCACTGATTCGGAGGAGGAGAGGGAGCGGAGGAAGAGGTACAATAAGAGGCAGCAGAAGAAGGCTTCTATCTCAGCCTCACCCAAAGAGTCGCTCTCTGAATCCTATACTGAGTTGTACAATAGTTGTTCTTCAGCCATTGAGAGCATCACCTCGCTGGTGAACTCGAAGGCGGCCAGCAAGGCGGCCAAGCAGCCGCTGCCGCCGACCCCGAAGCGGGCCCGACCGGAGCAGCCGCCCCCCTCGCCGCCCCCGCCGTCCCCATCGCCGCCGCCCCAACCGGCGGCCGCCGCCGCCCCCAGCCGCCCCAAGATGATCCACACGCAGAAGACGCGCGTCGCCGTCGAGACGCGCGAGGACGGTCGAGTGCGTCACAAGACCAAGACGACGGTGACGAGGACGCAGCCGGCGGAGATCCGCTCGGCCACCGGCGAACGCATCCGGCCTCGGACGAAAAACGTCAACTACCGCGTCCTGCAGCCCGACAAGCCGCCCTTGGCCACCTTCCCCGAGAGGGACCCCTTCGAGTCGGTCGACGCAGTGGACGCCTTCCTCAAGCAGGAGCACGTCATCGTCGAGCCCGAGGAAACCGCTGACCACGTCGCGGACCCGCACAGCAACGGGCTGATCTACATGGACCAGTTCGAGCACTCGTCCGAAGTGGCGTGTGAGCAGACAGTCGAGACCGTGCCGCAGCCTGTCGTGGAGTTCAGAAGGACGAGGTCGAGAAGCGCCAGCGGAGGCGCTGCCGGCAGCGCCACCATCGGCAGTTTGAAGCCGGGCCGGCATGTCATCGGACCGGGGAGCAAGGTGCGGCTAGTCAAGGAGGGCATGATCGTGTCGAAGGTGCGCTCGATCAAGTCCGAATCGGAGTCGGACCCGCCCGAAGCGGTCGACCCTGCCACGCCCACTTCCCCCCACCACCATCTCCGCCAATCGCCGATCAAGCGCGAGCCGAGCGCGCTGCACGAGTTGGCTGAGATATCGATGCAGCACGCGACCGCGCACGCGCACAACCTCTTCAAGTGCGAGATGTGCAGCGAGGTGTTTGCCGACAGGGCGCAGCTGTTGGTGCACGTGCCCGTGCACATTTGA
Protein Sequence: MDESFGLAWEDSNTVVQTEEVICGIENEILPAESVEFTGVPEEVAEEVVEATEEVVQDDAPIMYLTDENMLVVNEQTEQFNQEHLMDCQVTEEVITEQWGEGCPEEIDAPSTALKITAPPLTSPLSPVVGSEEAVDGTETGGDCDVPLPTDQDEYTAARPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYIRKCDLMNHLKIHAYIPEADGLEDEELHTIEEFAQHDKKKKAKQVVKRRKKKIKEEFDQFEVEAEASGSRGYNYEEHEGKIMDPIGNSKDDFDYEGQPEQSGELEHRFPITDPKKPFVCQHCGVGFAREKALSSHTRLHSEGDSPFECQKCGEMFWDPGQMRGHMKDKHGDLDDFDDDEDEDYSEEDSKYGTFYCTICGLSFHRQDNLRRHQRVHIKEEYVNEHEFGHVCNVCGESFQEALDLLAHAEVHARSVDFRCMICGDSAADESALAVHVQAKHGKNLPPNTCMLCGRSCKDRRTLLKHSWEHSKEKVFACSKCAKTFHNKARLKRHMLSHRSKAVQCDVCGEEFPDGRSLMNHRHSHSSVSGGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYTNSMTPYCCSVCSDMFATSQDLILHLIHHCDMNTAMKRQPQIGPRKYKRRRKLKPHELEMISNRAEEEDNGHTEDMADNFTDSEEERERRKRYNKRQQKKASISASPKESLSESYTELYNSCSSAIESITSLVNSKAASKAAKQPLPPTPKRARPEQPPPSPPPPSPSPPPQPAAAAAPSRPKMIHTQKTRVAVETREDGRVRHKTKTTVTRTQPAEIRSATGERIRPRTKNVNYRVLQPDKPPLATFPERDPFESVDAVDAFLKQEHVIVEPEETADHVADPHSNGLIYMDQFEHSSEVACEQTVETVPQPVVEFRRTRSRSASGGAAGSATIGSLKPGRHVIGPGSKVRLVKEGMIVSKVRSIKSESESDPPEAVDPATPTSPHHHLRQSPIKREPSALHELAEISMQHATAHAHNLFKCEMCSEVFADRAQLLVHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00740228;
90% Identity: -
80% Identity: -