Caen006598.1
Basic Information
- Insect
- Chrysomela aeneicollis
- Gene Symbol
- -
- Assembly
- GCA_027562985.1
- Location
- JARUHR010000004.1:24733933-24735489[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.5 2.2e+03 0.3 0.2 35 43 55 63 41 64 0.77 2 13 8.7e-05 0.38 12.3 7.0 12 41 61 87 55 89 0.87 3 13 0.0017 7.3 8.2 1.3 18 40 95 118 88 121 0.86 4 13 0.0081 35 6.0 3.4 14 40 119 142 116 152 0.72 5 13 0.41 1.8e+03 0.6 0.1 18 43 212 234 204 235 0.82 6 13 0.0026 11 7.6 4.9 14 38 234 260 220 263 0.74 7 13 0.00025 1.1 10.8 2.6 6 38 255 288 252 292 0.81 8 13 0.055 2.4e+02 3.3 1.9 18 39 323 341 302 346 0.76 9 13 0.001 4.3 8.9 1.2 12 32 345 365 337 372 0.80 10 13 2 8.7e+03 -1.7 0.3 14 28 375 389 367 395 0.74 11 13 0.0013 5.7 8.5 0.8 4 41 394 427 391 429 0.86 12 13 0.053 2.3e+02 3.4 0.4 18 32 435 448 430 456 0.79 13 13 0.0016 7 8.2 3.4 17 41 462 483 451 488 0.77
Sequence Information
- Coding Sequence
- ATGAAACCAAACAGCTGTCACGTACAATGCGATTCTTATGGCGATTTGAGCGATGAGCACAGAACAGAAACCCTTACCAGAAACGAAACGAAGAAGTCGTGTGCTGGGATCAAAAGGCATCCTTGTGCAGTTTGTGGCCAGACATTCGATACAGAGCCCATAATGATGGAACATATTAAACGCGTGCATGGTCGGAATATTTGCAGGCATTGCGGGAAGAAGTTTTCTTTGTTTAATAATTTGAACCGCCACCTTCGCACTCATATGAGAGAGATTCCTTATACTTGTGCGCATTGTGAAAAAGGTTTTTATCGCAAGGATGCTTTGACCAGCCATTTGCTCAGCCATGCAAGAAAGAAGCGTTACAGTTGCCCGCATTGTGAAAGCAAGTTTTCTCGTAAGAAGTCTTTGCAAAAACACATGCGAGATCATGCGGTAGTAGAATGTGCTCATCGGAATCGATATGTAAAGATAAGACAAAACAGTGATCCGTCCTCGAAAACCGAAGAATCCGCCCCTCAAAATACGCTAGAAGATTCAATTAAACCAAACAGCTGTCACGTTCAATGCAATTCTGATGGTGACGTGAATGAAGAGCACAGCGCAGAAACGCTTACCAGCAACGAAACGCATTATTGTGCAATTTGCGACCAGGCGTTTGATGCAGTGCCAACAATGATGGAACATATTGAAAACGTGCATGGTCGGAATATTTGTTCGCATTGCGGGAAGAAGTTTTCTACGAAGCAGAGTTTGAACCGCCATCACACTCGTACTCATATGAGAGAGACTCCCTATATTTGTGCGCATTGTGGGAAGGAGTTCTATCGCAAGGATGCTTTGAGCAGTCATTTGCTCACCCATGCAACTAAAAAGCTGTTCAGCTGTCCGCAATGTGAAAGAGAGTTTTTTAGTAAGGCGTCTTTGCAAAGACACGTTCGCGATCATGCGGTAGTGGAGCCGTTCATTTGTGGTCATTGTGGCAACAAGTTCCTTCACAAGAGAACCCTGATTACACATATTCTTATCCATAGGAGGAATAATAGTTATATTTGTTCATTTTGTGGCAAAGCGTTTTCTCAGAAGGGCAATTTGGAAAATCACCAACGTACACATGCGGTAGACAAGGCGTACAAATGTGCTCAGTGTGGGAATGGATTCTTCAGTAAAGGAAGTTTGAAAAGACATTTTCTAGTCCATGCGGAAGAGAAGCCTCACATTTGTTCAGTTTGTGGAAAGGGGTTCACTGAGAAGTCGAGTTTGAAAACTCACTTGCGTTCTCATTCAGGAGAAAAACCACATGTTTGTGAGCAGTGTGGTAAGAGATTCTCTGCCAAGTCGACTCTGAACATCCATATCTTCACCCACACGGGAGAGAAGCCTCATATTTGTTCAATTTGTGGAAAGAGGTTCTCTCGGAAGGTGAATTTGAACATGCACTTGCGTAGGCATACGAGGAAGAAGTCACATGTTTTTAAGCAAATGGGGAAAAAAATTCCCCCATGTGTGTCATCTGAACAATCACCTACGCATCCATACGAGCGAGAAGCCTCATAA
- Protein Sequence
- MKPNSCHVQCDSYGDLSDEHRTETLTRNETKKSCAGIKRHPCAVCGQTFDTEPIMMEHIKRVHGRNICRHCGKKFSLFNNLNRHLRTHMREIPYTCAHCEKGFYRKDALTSHLLSHARKKRYSCPHCESKFSRKKSLQKHMRDHAVVECAHRNRYVKIRQNSDPSSKTEESAPQNTLEDSIKPNSCHVQCNSDGDVNEEHSAETLTSNETHYCAICDQAFDAVPTMMEHIENVHGRNICSHCGKKFSTKQSLNRHHTRTHMRETPYICAHCGKEFYRKDALSSHLLTHATKKLFSCPQCEREFFSKASLQRHVRDHAVVEPFICGHCGNKFLHKRTLITHILIHRRNNSYICSFCGKAFSQKGNLENHQRTHAVDKAYKCAQCGNGFFSKGSLKRHFLVHAEEKPHICSVCGKGFTEKSSLKTHLRSHSGEKPHVCEQCGKRFSAKSTLNIHIFTHTGEKPHICSICGKRFSRKVNLNMHLRRHTRKKSHVFKQMGKKIPPCVSSEQSPTHPYEREAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00330903;
- 90% Identity
- iTF_00330903;
- 80% Identity
- iTF_00330903;