Caen013906.1
Basic Information
- Insect
- Chrysomela aeneicollis
- Gene Symbol
- Trerf1
- Assembly
- GCA_027562985.1
- Location
- JARUHR010000009.1:18646444-18678710[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-08 5.7e-05 24.6 0.3 2 46 1151 1195 1150 1195 0.96
Sequence Information
- Coding Sequence
- ATGGATATCGAAACGATAGCATTTTTTGATAGTTCATTATCAACTACAACCGCAGATGACAAAAAACCTGGAAGTACATCGGAACTAGTAAAAGTGTCGACGAAGCGTTCGAGGCCTAAACCTACGTCACCAAATAGACAGGGCCCTCAACAGTGCCAGGTTTGTGCCAAAGTTTTCGGAAACGCCTCTGCCCTGGCCAAGCACAAGCTGACTCACAGTGACGAAAGAAAATATGTATGCAGCATGTGTGGAAAAGCTTTCAAGAGACAGGATCACCTAAACGGCCACATGCTGACCCACCGCAACAAGAAGCCCTACGAGTGCAAAGCAGACGGCTGCGGCAAGAGCTACTGCGACGCACGCTCGTTGCGCCGCCACACCGAGAACCACCACAGCGGCTCTGCAGCCTCCCCATCGGCCGCCGCCGCCCCCACCACCATGTCGCCGGCGCAGGGGGCAGCCTCGGGCGATGCCGCCTCCCCGCACGGCTCCAGCTGCATCCAGTATGCGCCGCCGCCCACCTCGACGGCGGCGACAACGACTAcgacggcggcggcggcggcgggcGGCAAGAGCCAGCTGCAGCAGCTGCTGTCGGCCGAGCCGGTCAAGAGCGGTAGCAGCGCTGGGAACAACGATGGCCTGACCAAACAACAGCTCGACCTGATCCACCAGATCATGGAACAGACGCAACGGCAATCGCAAGCGGTGGTGGCGGCAGCCAGCAAGACGTCCACATCTAAATCCTCTTCGAAATCGAGCAGCAACAGTAGTAGTAGCAAATCTTCCAGTAAATCACACCACCACAGTAAATCATCTTGGTTATCGTCGGTCAAGGAACCCAGCCCTCGAGAACGATCTTGTCTCGCAGATTCCAGCGAAAACATTTCGCAAAGACAACCGCTGGACCCCTCGCCGTTACACATGtCGGGGCAGCAGCAAGCCGCCAACAAACCATCCTCCAGTGGCGGCTCGTCGGGGGGCAGCGGGAACCCGAACCAGCAGCAGTCCAAAGTGTCCACttccaccaccaccaccacctcCACTGCCAATTCCACCACGGGCAAACCGGAACCGAAGCCCGTTGAGTGCAATTTGTGCCACAGGAAGTTCAAGAATATTCCGGCGTTGAACGGTCACATGCGGCTGCACGGGGGATACTTCAAAAAGGACTCGGACAACAAAAAAAACGAGAAGAAAGACCCCACCGGTCCCCCGCTCCAAACTGCCAGCTTCAGCGTGCGCGCCCTCATCGAGGAAAAGATAATCAACAAACGCAACACCAACACCCCCCAATCGACCTCGGCCACACAGCAAGAGGAGAAATCCGCCCCACCCCTCTACCCCATCACGGTGAATTCTTCGTCGTCGTCTTCATCCTCCGCCAACACCGACCTGGAGTCGAAGATATCTTCCTTCGTCGTACCGGCGCCTCCGCACAACTCCGAGAAGAGCAGAAGACATTCCGACGCGGACACCTTCAGGGGCTCCGGCAGCACGCAGCAGGAGGCCCAGGCGATAGCCGACTTGATCCTCAAGAGAGAAAAGGCGACGGCGAAGAGGACTAGCTCGGATCCAGGCAGGCAGAGTTCGCCTCTCATCCAGTTCCAATCTAGCGAATCGTTCACGCTGGCCAATGTGACCTACCAGTCGGAAGAGGCGGAGTTCATATCGTCCAGCCTCCAGGACGAAGTTTTCACACAAGTGCAGGACAGTATGCTTCTCCAAGGTGTGGACGGCAACCAGTTGGCTTCCATACAATTCCAAACGGAGTCCTTTCAAGGCCAGAACGAGCAGCAGCTGCAGGATTTCAAGCTGGATGACATCAGCCTCGAAGAACCAGGGGTACAACAATCGCCATCCTATCAGTCCAGTCATTCGGTGAACCAAGACCTGCAGGCAGTGTTGGACTCTCCATTACCGGAGAGTTTGGCAGAGTTCAGTACCTTCCATACCACCAACAACATGGATATGCCTTCTCCGGGATACCAAACGCACTCACCCTATGCTAGATCACCGCATACTATCACTGCACAGTCACCTCTGCAAAGTCCTCTGGTAAGGCATGATTCTCCTGGTTTCGCTTATCCTACTCCACCAGCCAGTCATGAAGGGCAGAGTCCAGGTTTCGGGCAGAGCACCATACTCCCTATGGTATCTCCCAATGGACAAGAGTTTGGCCAAATAGTCGAGAGAGGTGTCTACGAAGAACCCCCTCAAGCTTCATCTCCTTTGTCAGCGGCCTTTTTCACCTCGACAATGTCCAGTTCTGAAGCAGTGGAAGAGGCTTTGGAGGAAGTACTACCTGGAGAGCCAATTTACCCACTCACCAACAGTCCTTCGCCCCCGTCTCCTCTAGGTTTGACTCCGGTGCCATCACCCATTTCAAACATCGTCAGTACTTCGAACCCCTCCCCAATTCCATCTTCGACGTTCTCATCATCTTCAAATACCTCGACTTTTTCCATGTCGAACAGCTGGTGCAACGGAGTCATGTTGCCAAACTCTGACGACCCCTTGCTTTCCAGCAGCCCCAAGGATTTCATACCCAAGAAAAAGATTGAGATCAACGGGGTTCCGATGAGGCTTATCAGCAACAACAGCTTGATAGAGCTGAACAGCTCGAATTTCGCTGGGATCCTGGTGGATTCCAACGGAGAAATCAAGCTGATACAAACGGGAGGAAACAATTTTCAAGCAAAGAATTTTCTGCTCACCAACACACAGTTGGTTGGGCAAGAAAGTGGCGATGATAAAAACAAAGTACAAAAACTAGTCAAAACTGTACAATGCACGATACCAACGAAAAACGTTATCAACAGGCCTAAACATGTCAATGAAATTAAGAGAGAAGATAACAACGACATTTTCCTCAGTCCTACTTCGATACCAGCTAGTCCAGTGAAAATTTCCAGAAAGAGACCTAGAACAGAACCCTTACAACTACCAGTATTTCATCAATCCAAGTTGAGAGCAACTAGGAGTAAACCTCAAGGCTCTGCTCCATATACGCCTCAACCAATACTGAATCCACAGAGGCCTGGCACAGGGCTTTACGCGAATGTGAAGAGCAAAGGTGATGAAGGGGTAAATTGGGGTAGCGATCCCATTCCAGAAAGCGACTCAACGCCACATGTGAATGTAGGTTCGAAATTCCAATGCAAAATACCACATTTCACTTCTGTTCCAAGAATGAATAGTCCGGAACCGTGCTATGAAGACCTCCTATGGGACCCTGGTATAAATTGTTGCACGGATTCTGAAGtcgaCATGTACTTGGATTTTGCTTGCTGCGCAGCAGTTCCTGGGGGAGGAAGAAATAAAGAGTATGCCATGCACCTTCTTCACATGTGCGGAGGAAACATTCACGAGGCAATGTTGAAGCTGATGCAACCGTCTCCAAGTCTACCGAATGACCATCCTCTGCTCGCATATCAGTATTGCGAAAGTGACAAATGGTCGAGTTCGGAAACCGAACAGTTCCACAAATTGCTGCTCAAGTATGATAAGGATTTTTATTGTATTGCTCAAGAGATTCGGACAAAGACCATAAAGCAATGTGTGCAATTTTATTATGTTTGGAAAAAAGTGTGCGCTGACGAACATCGTCGGGTGAAACAGTTGAGAGAGCGGAGATATAGCCACTGGAAGGGTTTGGAATCAGAAATGGACGAAAAGGTTTTTGCTGATGCTAAATTGTTAGGGattGCGGATAGTGGGTCTCCCATTCCAGTACAGGAAACCAGAAGTTTCGTGTGTGAATTTCCAGATTGCTCGGCTagtttCAATTCCCGAGCAGCGCTCAACGGCCACATCAGGATACACGGTGGCACCGCGCGCAACTCCCCTACCCCCACACCCTCCTCCTCGTCGACGAGTGACAGGCGACAGCCGGCCGTCAACTCTGGCCAATGTCACCCCGACTCGACCGACGAGTACCCCTGTAAGATATGCGGGAAAGTGTTCACGAAAATCAAAAGTCGTAGCGCCCACATGAAATCGCACCGGCCACCTGACGCAGAACACAGACACGCAGAACCGGCGAAACGAAAAGATAAGGACCCTGCCCCGCCCCACCACAGCTACGAACTGTCAGTGCCCAGCCCTTTTGCCACTTAG
- Protein Sequence
- MDIETIAFFDSSLSTTTADDKKPGSTSELVKVSTKRSRPKPTSPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCSMCGKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSGSAASPSAAAAPTTMSPAQGAASGDAASPHGSSCIQYAPPPTSTAATTTTTAAAAAGGKSQLQQLLSAEPVKSGSSAGNNDGLTKQQLDLIHQIMEQTQRQSQAVVAAASKTSTSKSSSKSSSNSSSSKSSSKSHHHSKSSWLSSVKEPSPRERSCLADSSENISQRQPLDPSPLHMSGQQQAANKPSSSGGSSGGSGNPNQQQSKVSTSTTTTTSTANSTTGKPEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSDNKKNEKKDPTGPPLQTASFSVRALIEEKIINKRNTNTPQSTSATQQEEKSAPPLYPITVNSSSSSSSSANTDLESKISSFVVPAPPHNSEKSRRHSDADTFRGSGSTQQEAQAIADLILKREKATAKRTSSDPGRQSSPLIQFQSSESFTLANVTYQSEEAEFISSSLQDEVFTQVQDSMLLQGVDGNQLASIQFQTESFQGQNEQQLQDFKLDDISLEEPGVQQSPSYQSSHSVNQDLQAVLDSPLPESLAEFSTFHTTNNMDMPSPGYQTHSPYARSPHTITAQSPLQSPLVRHDSPGFAYPTPPASHEGQSPGFGQSTILPMVSPNGQEFGQIVERGVYEEPPQASSPLSAAFFTSTMSSSEAVEEALEEVLPGEPIYPLTNSPSPPSPLGLTPVPSPISNIVSTSNPSPIPSSTFSSSSNTSTFSMSNSWCNGVMLPNSDDPLLSSSPKDFIPKKKIEINGVPMRLISNNSLIELNSSNFAGILVDSNGEIKLIQTGGNNFQAKNFLLTNTQLVGQESGDDKNKVQKLVKTVQCTIPTKNVINRPKHVNEIKREDNNDIFLSPTSIPASPVKISRKRPRTEPLQLPVFHQSKLRATRSKPQGSAPYTPQPILNPQRPGTGLYANVKSKGDEGVNWGSDPIPESDSTPHVNVGSKFQCKIPHFTSVPRMNSPEPCYEDLLWDPGINCCTDSEVDMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHEAMLKLMQPSPSLPNDHPLLAYQYCESDKWSSSETEQFHKLLLKYDKDFYCIAQEIRTKTIKQCVQFYYVWKKVCADEHRRVKQLRERRYSHWKGLESEMDEKVFADAKLLGIADSGSPIPVQETRSFVCEFPDCSASFNSRAALNGHIRIHGGTARNSPTPTPSSSSTSDRRQPAVNSGQCHPDSTDEYPCKICGKVFTKIKSRSAHMKSHRPPDAEHRHAEPAKRKDKDPAPPHHSYELSVPSPFAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00331021;
- 90% Identity
- iTF_00331021;
- 80% Identity
- iTF_00331021;