Caen018208.1
Basic Information
- Insect
- Chrysomela aeneicollis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_027562985.1
- Location
- JARUHR010000013.1:13780725-13826506[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-16 5e-14 53.2 0.0 1 42 308 350 308 353 0.94 2 2 1e-17 5e-15 56.4 0.0 1 43 677 720 677 722 0.95
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAAATGGAAACTGTACCAAGAATCCATGTCGAGGAGTTATCTGCAACCGCTGAACAACAATATAAAGAGAACAAACTTACAGGAGAACGATCTGGACCACAAAGAGACCAAACAGAATCAACAGTATCAAGAGGTGCACCCGATTGCGGAGGCGAAGCTGGGCAGAGAAGAGGAGGCGAACGAAGGAAGAGGGGACACGGCGGAAGAGCACCAGAAGGAAAACGAAAAAAGTCGCGCGTCACCGGAAGAGAGACTGAAAGACTGGCAGCCGGAGACGAAGTGCCACTTTTGCGTCGACGGCAAGCTGGATACTCTCGACAGTGAACACACGAATCACGGGGTTTCGagtcCCCGGCTTTCGGACTCGGACACTTCGGATAGTCAGAGCGACAGCGAAGTGCCCTCATCCCTAACAACTACCTCGAGGGGGTTGCTTAATAACAACCACCATCATCACAGATCAACAAGCGTGCCACACCCCACAACCCCATCATCCCCGTCGGTCATGACCACCATCGAGACCACCATGTCAATGGCCGCCCTGACAGCGGCGGCAGCGCTGTCGGGCAGCGGGGCGGGTGCCTCTCACGCCCACGCCCCCCACCGCCCCCCCTTCTACGACCCCGGCGTGCTGACGCACAACTGGTACATCGCCAACGTGGCGAGGTCGTTCCAGAacgcggcggcggcggcgcagGCGGCGGTGGCGCAGCCGCCCCCGGATGGCTCCAAGGCCGCGGGCGGCGCCGAGCAGCCGCTCGACCTCAGCAAGGGCGGCCATCACGGCAACGGGGCGGCCGCGGAGCTCGGGGCGGCCATTGGGGGCGGCGTGAGGCCGGCCGTGATGGACACCAAGCACATATTCAGGGCGAAGCCGCGCGTCTCAGCCGTAGCCGGCCGGCGCACCTACACCGAGGACGAGCTGCAGGCGGCGCTGCGCGACATCCAATCGGGCAAGCTCGGCACCCGTCGGGCGGCCGTCATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAGGTGTACAAGCTGGCGCTGGAGCGCGACCGCGAGGCGCACCTAGGTGGCGCTGGCGGCGGCAGCGTCGCGGTGGCGCCGCTCACGCTCGACGAGGAGGAGGAGCGCGAGCTTTCCGGCGCCGAAGAGGAGAGGGAGGTGGAGCGGGCGCTCAGGGCGCCGTTGCTGTCGATGGCGGATATCTTCAGGTTCGCCGGCGGGGAGCAGGCACCACCCGAAGCCCTCAAGATGCTCCTCCAGAAGAATAAAGAGGGCCAAGACGGCTGGACGGGAATGGAAACCAACGAGGTTGGTCCGTACATCCAGAATTTGATCTTAGCCTCGCAGAACATGATGACCAGCCAGAAACTTCCAGAGGCGGCGGTCATCAACCACATGATTCCTGAGCTCATGAAACGGATGATGGCAGAGGAACAACTCCTGAAGTTACAGAACAGCAATGGAGATTCCGATAGGTTGACCAGGCCCAGTCCCAGCAACTCAGTCATAATGAAAGTTGAAAGGCCGAAATCGGAGTCAGACATGGAGACAGATGAATCGCCGTCGAATGTGATACTGAAAATTCCGTCCTTCAAACCGATGTCGAGTAAGAATGGATGTGACAGTTTTAAGCCCCTTGGAGAATCAACAGGCAGCATGATCTCCCCGCCAGTCACGTCGGACTCCTCATCGCCGCCCATCTTGCCGCCCTCGAAGCCGCCCGGCGCCCTGCTCGTCAAAGACGTCAAGGACGTGATCGCGCAGAGCATCAGCCAGAAGTTCCAGCAGGGCGAGGGGCAGCCGCGCCGGCCGCCCATGTTGGAGGTGGGCGAGTTCCCGCGGGGCGGCTTCACGCCGCCCCTCGCGGCTTCCGCCGGCATGTCGGTGATCAAGGCGCAGCACGAGCTGAGCAGGCACTACCAGCCCGCGCGGTCGCAGCAGGGCGTGGGCGGGGGCTCGGGCGGCGGGGCCAGCACCGGGGGGAAAGGCACCCGCCCGAAGCGCGGCAAATACCGCAACTACGACCGCGACAGCCTGGTGGAAGCTGTGAGGGCGGTCCAGAGGGGCGAGATGTCCGTCCACCGAGCGGGCTCCTACTACGGCGTGCCGCACTCCACCCTGGAGTACAAGGTGAAGGAGCGGCACCTGATGCGGCCGCGCAAGAGGGACCCCAAGCCCAACCCGGTGGACGAGAAGATCGCGAGTTTGAAGCAGAACGACCTGAGGATCGCCGGCGACAAGATGAAGACGATGATGAAGGCGCCGCCGCAGAAGTTTCCGCCGACTTCGCCGAATGGCATGAAGCTGCCCATGTTCGAGCCGGGCATGGGTCCGATGGGCTACAACGCGCCGCCCTTCCCCTTCTGGCACCACGGCTTCCCGCCCATGCCGCTAGAGTTCGCGGCGGCGGCAGCGGCGGCGGCCGGTCGTACGCCGACAACGCCGCCATTCGCGCCGCCCGCCGCCGACTTCTTCGCCTCGCAGATGATGCAGAAGCTGCAGGAGGAGTCGGCGAGGGCGATGGCGGGACAGGGCCAGGCTGGAGGGAAGTGCGCTCCCCCGGGTGGCGCCCCCGCGCTGGCCAAGAACGCCCGCCAGATGGCGGAGTCGCTGCTGGAGGGTCCGGGCGCGTCGAACGGCTCCTTCCTCGACGGCATCATCCGGTCGAGCCTCGAATCGGGCGTGCCTAACACCGAGGGCAAGCCGCCGGGTCCCGGCGAGGGCCTGCAGAATAACGCTGCGGCGCCCGAGAACATGTCCAACAAGGCGCTGCTCGACCAGCTGTGCAGGAACAGCCGGCTGACGCCGCTCTCGAAGCCCACGGCCGAGGGGAACAGCAGCGGGGACGAGTCCTACCGGAAGGGGTCCAGTCCGCTCAACTTCTCGACAAGTGGCAACTCCCAACATGATGACAACAACGACGACGATTCGTCATCCAGATATGACAAAGACGACTCCGAGGTCCACACCATCGAACTCTCGAACGACTCGAATGCATCATCGGTCGAGAGGAAGGCGATCGACGAGGAGATCGTCCCAAAGCCGAGAATCTATCTCAAACAGGACCTCGTGAAACCGGAGAATCTGAAGCCGGAGATGCTGGTGCGCTTCCAGAACATTGTTCCGGATCACAACGGGCTGAATGACAGCAGCGCATCGGATAATGACGGCAATCAAGACTGA
- Protein Sequence
- MGRRKWKLYQESMSRSYLQPLNNNIKRTNLQENDLDHKETKQNQQYQEVHPIAEAKLGREEEANEGRGDTAEEHQKENEKSRASPEERLKDWQPETKCHFCVDGKLDTLDSEHTNHGVSSPRLSDSDTSDSQSDSEVPSSLTTTSRGLLNNNHHHHRSTSVPHPTTPSSPSVMTTIETTMSMAALTAAAALSGSGAGASHAHAPHRPPFYDPGVLTHNWYIANVARSFQNAAAAAQAAVAQPPPDGSKAAGGAEQPLDLSKGGHHGNGAAAELGAAIGGGVRPAVMDTKHIFRAKPRVSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERDREAHLGGAGGGSVAVAPLTLDEEEERELSGAEEEREVERALRAPLLSMADIFRFAGGEQAPPEALKMLLQKNKEGQDGWTGMETNEVGPYIQNLILASQNMMTSQKLPEAAVINHMIPELMKRMMAEEQLLKLQNSNGDSDRLTRPSPSNSVIMKVERPKSESDMETDESPSNVILKIPSFKPMSSKNGCDSFKPLGESTGSMISPPVTSDSSSPPILPPSKPPGALLVKDVKDVIAQSISQKFQQGEGQPRRPPMLEVGEFPRGGFTPPLAASAGMSVIKAQHELSRHYQPARSQQGVGGGSGGGASTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRIAGDKMKTMMKAPPQKFPPTSPNGMKLPMFEPGMGPMGYNAPPFPFWHHGFPPMPLEFAAAAAAAAGRTPTTPPFAPPAADFFASQMMQKLQEESARAMAGQGQAGGKCAPPGGAPALAKNARQMAESLLEGPGASNGSFLDGIIRSSLESGVPNTEGKPPGPGEGLQNNAAAPENMSNKALLDQLCRNSRLTPLSKPTAEGNSSGDESYRKGSSPLNFSTSGNSQHDDNNDDDSSSRYDKDDSEVHTIELSNDSNASSVERKAIDEEIVPKPRIYLKQDLVKPENLKPEMLVRFQNIVPDHNGLNDSSASDNDGNQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -