Caen017485.1
Basic Information
- Insect
- Chrysomela aeneicollis
- Gene Symbol
- JARID2
- Assembly
- GCA_027562985.1
- Location
- JARUHR010000013.1:2013934-2041088[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.46 4.8e+03 -0.5 0.1 25 79 327 376 309 383 0.75 2 2 9.4e-22 9.7e-18 65.8 0.0 6 89 1959 2040 1955 2040 0.93
Sequence Information
- Coding Sequence
- atgaaaaggaaaaggaaaaatgCTTGTCCATCACCATTATTGGATGATAGCCCCAAGAGAACCAAAGTGCATGCACAACGTAAGTTTGCACAAGGTTCAAATGTTAATAGCCCAGTTATTACACCGATTCGTGAGCTGGAGTCTGATTCCCCCAGAAATGATGTGCTACCAGAGCCAGTTGAACTACTTCCCATAAAAAGGCCAAACACTGAGGATTTTTTAACTTTTCTGTGCTTCAGGGGTACACCTATTCTTCCTCCTAGCTTGAATTTTTTCAACACTGCCTCTATAGTTGACACCAACGGTCAAGTTCATGAAATTAAGAGTGAATCTTCACAAAAGAATGGACCCATAGACATCACCAAGTGTGGAACCTCTACAGATAAACCTTTCATTGCATTTGGGGTTAGAAAGAGAGCTGATCCAATAGTTATAAGTCGCCAGATGGATAGAAAAAGGAGGCATGCTCTTGCAATACAAGCTCTTAGGAGAAAATACCAAGAACAAAAAATGGCCAAAATCAGGGCTCTCACTATTAGCAAACTATCTGAGAAAGTTACCAATAGAACCCTGGTGAAAACAAACACTGTTTCCAAGACAGAAACGGTGactaaaaaaacaaattcatcACAAAAAACCAAAGTTGTTGCCACCAAGCATGTTAAGGTCACTACACAAACTCTAAAAACTACTATGAGGCCCAAGATGGGCCAGAAAATGTGCCTGCGTAGCTTCAGGGGTCACATTGTGCAAAAAGAGCTTCCATTCATAAAACGTGTTGGGGCAGTTAAGAATGTTGTGAGGAAAAATGCAAACCAGAAGAGTGAGGCAAAAAAAATTGAGGAAGAAATTTCAGAGAAGGGTGAACCTATACAACAACAATCAGGTCCAAAAAAAATTAAGGAATCAACAGTAGGCACCAGCTCACGTGTGACAAGATCTGGTCAAGTAGACAACAAATCAGAAGTTAGAAGAAAACAGATTAAAAAACGCATACTCAGACTAACAACAGTAAAGAAAACTGTGGTGTCCCAAAGAAAGAGCAGATCAATCAAAGCCAAAAAAAGGCTGAGAACAGTGCAGAAACTGTCTGTCCCTGAAAATAATGCTGCTAAAGCTGTAAAGAAAGACTTTGATGAAGTAGTGAATGCCAAGAAATTACTTGTGGGTGCTAAGAAATATGCCAAACAAGCTGAGAAGAAAGACACTCTCCAGGTTAATAAAAAATCTGACCACAATCTATCGAATAATACAGATGATGCTAAAGACACATTTGATATCAAAAAGGACTTCAAAAAAGTGACAGGTTATAAGAAAGAATcaaaagaaattattgaaaaggaCAAAAAGCAAGTGAACAAAAGAGTGGACATCAATAAGGAAATCAGTAGATCTAGTGATATCAAGAGGAATCCCAAAAATATGGTTGAAACCAAGAAAAGCATCAGGATATCCAATATTATTCAGAGAAAAGAGATAAAAAATGCCAACAATACTAGTCAAAGAACCAGTGAAGAATACAAAAGAAACAGAAGAGTACAAAAAGAAGTAAATAAAAATGAGGAAGAGAAATCAGCAGGAAATAAAAATGAACAAAAACTACAGAAGAAATCATTGATTGTGAAAAAAACAAGGAGCCAATCAGAGGAACAGGCTAAAGATTTGAATGAAGAGGTGGATGCAGATAGCAAATATATGAGGAAAGAAAAGCTAAAAAGTATTGCAATGGAAGAAGGAGCTGAAATGAAGAGAACATCTAAAGTAGTAGTTCTTGGAAAGctgaacaaaaatgaaaatactgaagaaaATTGTTTCGTAGCTAAAAGCTGTTCAACACCTGAAACATCTGAAAAATTAGAAAACATTGCTGAAACTATTCAAGATTCAGGATCAAATCAATACCTTGAGAATAAATCCAACTCAAAGAAAAAATCATCTCTGGACAGGAAACATATCAAAGACAAAATGTTGGAAGTTGACAATATCAAGCCAGTTtccaatgaaataaaaaatctgcaAGCAATTGGTGAAGAAATTAATAGTTCTGaatcaaaaatgaaatatcCCAAGTCAGTAGAAACTCAGGGATATAAATTGAAGGAAAAAACAATAATGGAGGACAATAATATTGATGAAACAGAGATTGATCTGAAGACAGTTGGCAAAGACAAAATCTGGCCAGTGAACATTTCAAATTCCAAAGAAACATACTCTGAGAGTGAATCTGAAGTCAAGAATAAATCAGTTCCAGAAGAGGAGAAAATGTTTGCATACTTCAATAGTGTGAAGGTAGTAGATGTTGAAAAATTACAGCAGCCAGTTTccagaaaaataatgaattttaaAGAAGTTGTTGAGGCAATTCTAGAGGCAAAGGATTCAGATGAATCTGATAATGAAACCAAAATATTGAATATGACACAAACAAGTGCAGGTCCTACAAGCTCAAAGATTTACTGGAATAATCCTACTATTGATATGGTGGAAGTTGCTCAAGAAATACCAACAGAATATGTAGATGTGGATAAGAAACCTCCAACTGATATCAAAAGAGATAGCAAAAAGATCAATATTGAAAGAGTAGAAGACCCATATATACATGAAATTATTGAAGAATTGGAAAGTCCTGATGttgattcaaaaatatttccaagACATATCAAAATATGGGATACAAAGGAGATTGCTTCTGGAAATGATGTTCAGAAGAAGACAGAAGTAGACAAAGATAAAAAAGAAAaggtaattgaaaaatttaGCAAAGATGAAAAACGGCAGTCCTCTGAAAGTCAGAAAAGCAAGAAAGTCACTAGTGGTAAAGAAAAAAGCATAACTGAGGTTAAGAACCTAGCTAAAGTGatgaacaagaaaaaaaatagaTCTAAGTCATTGAGAAAAGAATCTACAGAGGAAATAGAAGAGTTGAACAATATTACTGATAAAATGAGAAAGTTGGATACTAAAACCACAGAGCCCTCTATAGAGGATGATAaaatttcagaagaaaaatcatcagttgaaaatgaatacaaaaataataaatctgaTGAGTTTTTATCATCAAAAGATATAGCAGAAACCAAAAATCCTGAAATGCATTCATTGCATGATCAGACATCAAAGAAAATCAATTTTGTAATGCTAGTTTCAAATGATAAAATGAAATCTGAGACAACTGTCATGGATGAAACAGTTAGGAAttctgaaaatactgaaaaggATGAAAATATGCTCATTAATACTGAAAAGGAGCATAATCAAAAACTCAAAAAAATAGCTGAAGCCACTAAAGCAGAAATTCTTGTTAGAGGAAAACCAGAAAAACAAGTAGAAATTGATAAAAACGCTATTCTGAATACTAAGAACGTTCGAAAATCACAGGAACTTCTTATGAAAtctactgaaacaaaaaacacgGAAAAACCTGTTGAAAAATACAAacaatcagatcaaaatattgaatattctgaaCAATATGAGCAAGGGAAACAAGTTACTGGAACTGAAGTCAGTACTGAAAATGAAACAGAAATTCAAAATACTAAAAGGCAAAATGTAAAAAGATCTGTATCAGATAAAACAGTCGAAGACCTTGACAGAATTGAAGACCCTCATCAAATGCTTGAGATACAAAAAACAGAAAAAGGATTCACTGAAAAAATGCATAAGGATCCAGACGGGCCGAAAAAACTAATTCCGACCAAGTCAAAGAAAGAAGTTGCTAAAAGAGACGAATTCGCTTCCAAAAATGAAAAACCAGCTGATATAGATCACTCTATGCCGAAGACAAGCCAGAGACCTAGCAGAAAGACTAAAGAAGCTGCTGCCATCTACATGGAGATTCTTAGTCACAAATTAGTTCGCGAAAGCCGGATTGACGATGACAACATTTCCATTGATAGTTTTCCCGAGCTGCCAAACGTCAAAAAAACTGAACAACGAGAAAACGAATTAAAAAAAGCTCAAGCCAAAACCTCTAGAGATGACAAAACTGAGGAGAAAACAGGAAACACAATGGTCGACGTTCAAGAATCCTCACATGATGAAATTATGGATGTTGAAGACATACCTGATGATATAAAACTAAACGATCTTAAACACAGGTTGCAAAGTGCTGGGACGAGTCTAAAGAAACCAGTCATTCCAAGAAGGAAATCGACTACCAAGACCAGGATTCAAGACCAAGAGTTTTCAGATTCTGACGACATCGACATCAAAACGCTGATATCTAGAATGTCGGAAGAAAAAGTCGACGAGAACGATAAAGAATCCATACAGAAAGAGGAAAAAGTGCTGCCAAAGAGGCAGTCTAGAAACATTCCACAAACTTACAGGACCGAAGACAGCTATGGATCGGATGAATCTTTCCACATTGAGGTCAAAGTTCCAAGGCAGAAAAAGTTGACTAGAAGTAAAACTGCCAGTAAACTGACCAAAAGTATTACCGCTGATGCCGAGCAAGAAAAAAGTAATGCCAGTGTAAAACCTGCCAGCTCCAGAGCCAAGTCAAGCTCGACCACTTCAGACGAATCCACAACATCTGACGTGAACCTCCAAGTCTTGGCTAACAAAGCAAAGAGCAAGAAGTTCTCGAAAACGAAATCTGTCAAAAAAGTCGATCAAGATTTCAGTGATTCGGACGAGGAACCCCTATCGAAATTGACCGTCAAAAGTGTAGAGGGCAGTCAGAAGTCCGTGGTGCCAACGGAAAAGAGCAAAGACGAACCTCCCAAGGCTCCAGTGATTGGGAAAACCTCCCCCAAGCCCCCAGACGTGGAGGCCATCAAACCAGAGACCAAACCCAAGAGGGAGTGTGCGAGGATACCGCAAAACTACCTGCCGATGTTCTCCAGTTCGGACGAGGAAGACATCTTCCACGGCTTCGACAAGAAAACCGAAAAAACCAAACCCCCATCGGTGTTGGACCCCACCCCGCCGCTCCTGGACCTGCTGAACAAAGACCTCAGCAGGCGCTTTGGAAAAGAAAAGGTCAACATGTCCAACGAGCAGATCGAGCAGTGGCTGAAGGATTCCGCGCTGGCAGGCAGCAGCATCAGAAAAGAGAACGACAACATGCTCAAGTTCGGCGAAAAAATCCCTAACGTGGAGAAGCCACCCTCCAAGCCCGACCTGGTGAAATCCGCTCCAGCCAAACCTCCCCTGGACCGGAAGCTGATCTTCCGCAAGCACAAGAAGGAAGCGGCGCCCAACGTGAGCGCTTTCTCGCCCGAGAACGAGAGCAGCGTGTACGCCTTCGGGGAGGACAACGAAGAGGTGATCAGCACGCCCTTCCGGAGGCCCTCCAGGAGGCCCTCGAGCACCGCCACGTCCAGGTCCGAGGACGAATCTTCCGGGCACTTCCGGAAGCCCAGCTCGAGGGCGGCCAGGGAGGAGCCGGAGGCGAGCGTGGAGGCCGAGGACAGCCCTTTCTACGTGCCCCAGAAGCCGTCCAAGGCTGTCAGGACGCCGTTGAAGGCGCCCAAGGGCGGGGAGAGGTTGCCCGAGCCGGAAGACTTCAGGTACAAAATCCCCAGCTCGCCGAGCGCCAGCTCCTCCTCGAGCAACAAGCACCGGCAGCCGCCCAAGCCGCGATTCGGCGCCCTATCCCCCCTTCACTCGGCCGACTTTCCCGCCGACGGCGCCGCCGCCGCCGTCGTCGAGGCGCCCGTCTTCCATCCCTCCGAGCAGGAGTTCCAGGACCCCCTCGAGTACATCGAGCGCATTCGGCCCAAGGCGGAACCGTTCGGCGTTTGTCGGATAGTTCCGCCGGCCGCGTTCAAGCCCGAATGCAAGGTCGCCGATGACATGAGATTTACTGCGTACGATCAGCGCGTGCACAAGATGTTGTTGAGGTGGGGGCCCAACTTCAAGGAGCTGATGGCTATCAGGAAGTATTTGGCCACGCAGAACATCAGTCTGGTGCATCCGCCGTGGATCGGAGGCATGGAAATCGACCTGCCGAAGCTCTACCAAACCGTTCAGACCCTTGGAGGCCTCAAAGAAgtaatcgaaaagaaaaaatggccGCGAGTATCGGAGCTGatgaaaataccgaaatccgCGCAAGACCGCGTCACCAAACTCGATGACATCTACTGCAAATATTTACTGCCCTACGACACCTTATCCATGGccgAGCGGGAAAAACTGTTTGACGAGGTGGAGACCGACTGGGCCAAGCGCGAGTCGAAAAAGAATGCGGCAAACGCCGACAACGACTCAGACCTCGAGGACGACGTCGACGAGTGCATCACCAAGGGCCGCAACATGGCGCTGAACGCCTTCTACAGGATAGCCCGCAACACCATGAGCATGTACTTCAAGACAAGCGAACCGTCCGCCCAAGAGGTCGAACAGGAGTATTGGAAGTACGTTATGGAGAGGCAGAATCACATTTGCGTCAATTCCGGGTCGATAGACTCCGGGAGTTGCGGTTACGGCTTCGCTGTAGCCAAAAACAGCCCTTTCGCCAGGCACCCCTGGAATCTCAAGGTTCTCACCAATAACAGTGGGTCCATCCTGAGGTCGATCGCTCCTCTCATGGCCGTAACAGTGCCCACCCTGCACGTGGGCATGGTGTTCAGCGCGTGCTGCTGGTACCGCGATCCGCACGGCCTGCCCTGGATCGAATACCTCCACACGGGCGGCAGCAAGGTGTGGTACGCCGCCCCCACCACCGCGGGCGACCGCCTGCGCGCCGCCCTCTCCGACTTGGCGCCCGGCCGTTGCCGTGACGACCCCCACCTGTGGCTGCCCTCGGACGCGGTGATGGCGCCGCCCGCCCAGCTGGTAGCCCGCGGCGCTTCGCTGGCCCGCGCCGAGCAGCGCCCCGGCCAGTTCGTCGTCGTCTTCGGCGGCGCCTTCTCCTCCGCCCTCAGCACCGGCTACACCGTTTCGGAGAGTGTGTTCTTCGCGCCCCCCGGGTGGCTGCCCTCTGCTGGTAAGCTCTTCGGGGATCTGAGGGCCGCCCGCGAGCCGTCAATGTTCTCGCTGGACAGGCTGGTGATTGCGGTGGCGCTGGACGCGCGGAGTGGCGTCGCGGCGCTCAGGCAGGCGGCGGCGCCGTTGGGGGAGTTGTGCGAGAGGGAGGCGAGGAGGAGGGCAAGGCTGGCCGAACTAGGGCGGGTGGCGAGGGAGCGGTTGCCGCTGCCCGAGGCGGGGAGGGGCAGGAAGAGGCGGCGGCAAGGCGATGAGGGGGATTACGAGTGCGATGTGTGCAGGACGAGTCTGTTTGTGTCGATGATATTCGATACGGTGGAGGGCATAAACTACTGCCTGGACCACGGCATAGAGATGCTGGAGGCGAAAAAGTCCCAACTGTCCAACTGCAAGTTCATGTTTACCTACGACGACGATGAGCTGGCAGCCCTTCCGGACAGATTGAAGGCGGCCATGGAGAACAAAGGGCAGAAAAAGGTGCCCAACAAGTACGCGGGCATGCCCACGCTGCTCACCAAGTGA
- Protein Sequence
- MKRKRKNACPSPLLDDSPKRTKVHAQRKFAQGSNVNSPVITPIRELESDSPRNDVLPEPVELLPIKRPNTEDFLTFLCFRGTPILPPSLNFFNTASIVDTNGQVHEIKSESSQKNGPIDITKCGTSTDKPFIAFGVRKRADPIVISRQMDRKRRHALAIQALRRKYQEQKMAKIRALTISKLSEKVTNRTLVKTNTVSKTETVTKKTNSSQKTKVVATKHVKVTTQTLKTTMRPKMGQKMCLRSFRGHIVQKELPFIKRVGAVKNVVRKNANQKSEAKKIEEEISEKGEPIQQQSGPKKIKESTVGTSSRVTRSGQVDNKSEVRRKQIKKRILRLTTVKKTVVSQRKSRSIKAKKRLRTVQKLSVPENNAAKAVKKDFDEVVNAKKLLVGAKKYAKQAEKKDTLQVNKKSDHNLSNNTDDAKDTFDIKKDFKKVTGYKKESKEIIEKDKKQVNKRVDINKEISRSSDIKRNPKNMVETKKSIRISNIIQRKEIKNANNTSQRTSEEYKRNRRVQKEVNKNEEEKSAGNKNEQKLQKKSLIVKKTRSQSEEQAKDLNEEVDADSKYMRKEKLKSIAMEEGAEMKRTSKVVVLGKLNKNENTEENCFVAKSCSTPETSEKLENIAETIQDSGSNQYLENKSNSKKKSSLDRKHIKDKMLEVDNIKPVSNEIKNLQAIGEEINSSESKMKYPKSVETQGYKLKEKTIMEDNNIDETEIDLKTVGKDKIWPVNISNSKETYSESESEVKNKSVPEEEKMFAYFNSVKVVDVEKLQQPVSRKIMNFKEVVEAILEAKDSDESDNETKILNMTQTSAGPTSSKIYWNNPTIDMVEVAQEIPTEYVDVDKKPPTDIKRDSKKINIERVEDPYIHEIIEELESPDVDSKIFPRHIKIWDTKEIASGNDVQKKTEVDKDKKEKVIEKFSKDEKRQSSESQKSKKVTSGKEKSITEVKNLAKVMNKKKNRSKSLRKESTEEIEELNNITDKMRKLDTKTTEPSIEDDKISEEKSSVENEYKNNKSDEFLSSKDIAETKNPEMHSLHDQTSKKINFVMLVSNDKMKSETTVMDETVRNSENTEKDENMLINTEKEHNQKLKKIAEATKAEILVRGKPEKQVEIDKNAILNTKNVRKSQELLMKSTETKNTEKPVEKYKQSDQNIEYSEQYEQGKQVTGTEVSTENETEIQNTKRQNVKRSVSDKTVEDLDRIEDPHQMLEIQKTEKGFTEKMHKDPDGPKKLIPTKSKKEVAKRDEFASKNEKPADIDHSMPKTSQRPSRKTKEAAAIYMEILSHKLVRESRIDDDNISIDSFPELPNVKKTEQRENELKKAQAKTSRDDKTEEKTGNTMVDVQESSHDEIMDVEDIPDDIKLNDLKHRLQSAGTSLKKPVIPRRKSTTKTRIQDQEFSDSDDIDIKTLISRMSEEKVDENDKESIQKEEKVLPKRQSRNIPQTYRTEDSYGSDESFHIEVKVPRQKKLTRSKTASKLTKSITADAEQEKSNASVKPASSRAKSSSTTSDESTTSDVNLQVLANKAKSKKFSKTKSVKKVDQDFSDSDEEPLSKLTVKSVEGSQKSVVPTEKSKDEPPKAPVIGKTSPKPPDVEAIKPETKPKRECARIPQNYLPMFSSSDEEDIFHGFDKKTEKTKPPSVLDPTPPLLDLLNKDLSRRFGKEKVNMSNEQIEQWLKDSALAGSSIRKENDNMLKFGEKIPNVEKPPSKPDLVKSAPAKPPLDRKLIFRKHKKEAAPNVSAFSPENESSVYAFGEDNEEVISTPFRRPSRRPSSTATSRSEDESSGHFRKPSSRAAREEPEASVEAEDSPFYVPQKPSKAVRTPLKAPKGGERLPEPEDFRYKIPSSPSASSSSSNKHRQPPKPRFGALSPLHSADFPADGAAAAVVEAPVFHPSEQEFQDPLEYIERIRPKAEPFGVCRIVPPAAFKPECKVADDMRFTAYDQRVHKMLLRWGPNFKELMAIRKYLATQNISLVHPPWIGGMEIDLPKLYQTVQTLGGLKEVIEKKKWPRVSELMKIPKSAQDRVTKLDDIYCKYLLPYDTLSMAEREKLFDEVETDWAKRESKKNAANADNDSDLEDDVDECITKGRNMALNAFYRIARNTMSMYFKTSEPSAQEVEQEYWKYVMERQNHICVNSGSIDSGSCGYGFAVAKNSPFARHPWNLKVLTNNSGSILRSIAPLMAVTVPTLHVGMVFSACCWYRDPHGLPWIEYLHTGGSKVWYAAPTTAGDRLRAALSDLAPGRCRDDPHLWLPSDAVMAPPAQLVARGASLARAEQRPGQFVVVFGGAFSSALSTGYTVSESVFFAPPGWLPSAGKLFGDLRAAREPSMFSLDRLVIAVALDARSGVAALRQAAAPLGELCEREARRRARLAELGRVARERLPLPEAGRGRKRRRQGDEGDYECDVCRTSLFVSMIFDTVEGINYCLDHGIEMLEAKKSQLSNCKFMFTYDDDELAALPDRLKAAMENKGQKKVPNKYAGMPTLLTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -