Caen001753.1
Basic Information
- Insect
- Chrysomela aeneicollis
- Gene Symbol
- ARID5B
- Assembly
- GCA_027562985.1
- Location
- JARUHR010000001.1:25336897-25350941[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-25 3.6e-21 76.8 0.0 2 89 241 326 240 326 0.94 2 2 5 5.2e+04 -4.0 0.0 60 83 808 829 796 830 0.57
Sequence Information
- Coding Sequence
- atgtcactgtcagaaataaaatctgTTTTGTTCTTTTTCCAGGATGAAATTCTCGCCATTTCTGAGAAAGTTGTCATCCGCGTGGAAGACCTCGTCACGTGGATAACCACGGAGGCGGAATGGACGTGGGGCAGGCTGGCCAAGTCCGTGGAGGACGTCGGACCAGGGGGGCACGAGGAGGGGGGCGGCGTGCCCCCCAAGAGTGCGGCGGGGATGTGCTTCAGTTTGACGGACAACGGTTTGGATTTCAGCGATGTGGAGAGTGAGAGGAAAAATTGCGAACCGCCAACAGAACCTTCACCGCCGCGCGTCATTATCCTCAGCTACCCCAAGTACTGCCGCTACCGCGCCGCCATGCGCCGCCTCGACGCCGCCGACGCCAGCCTGCTGCAGCGCCGCGACGTCCTCGCCTTGGGCGCCTTCTACGTCGCCCAGCCGTGCACCAGGGTGCTCTTCTGCCGCGACACGTTCGACTACCCCGAGCTGGAGGGGCACGACATGCTGTGCAACCATCTGGCGCCCAAGCTGAAGGGCAGGCCGAGGGGCAGGCGGAGAAAGAGGGGGGCGTCGCCCCAAGGGTCGGAGGGGAACGAGTCGGAGGCGTCGGTGGGGGGAGGTGGTGGGAGTGGGGGGAATGCGAGGGCCGACAACAAAAACGGACTTCATGGTGACTCAGGTGTCACTCCGCGACGCAGCACGCGTTGCCTCGAAAACAACGAGAACAAGGAGTTTGTGAGGAAACTGGGATCCTTCATGAAGTCGAATCGCACCCCTATTGGCAGGATTCCCTCGCTGGGGTACAAGGAATTGAACCTCCACGAGTTCTTTTCGAGGGTGCAGAGGCTTGGGGGCTATGACTCGGTGACAGGCAATCGCCTGTGGAAGTCTATATTCGAGGAGATGAGTGGACACCAGAACAGTACCAGTGCAGCTACCATCATCAGGCGACATTATGAAAGGTTTCTTTTGCCGTATGAGCGCCACGTCAGAGGAGAAGAATACAAACCCATACCCGGATCGGCCAGGAGGAGATTGAAGAGCAAGAGGGGCAGCAACAGCAGCCTGAGCGACGCAGACTCCAGCAGCTGCGACAGTCCCCCAATGCCGTCCACCTCGACAACCATGCCATCCCCCACAGTTTCACCCTCGGAGAACAAGGATAATTCGAGGGTGGAAGGAAAACCGTCCTCCCTGAGAAGCGTCCGCGTGAAGCCGGAAAGGCAGAAAGGAAAACAGAGCCGAGACGAGAGAGACGTGGTCCataacaacaacaacaacgGCGAGAGTAACAGCTTCCAGCCGACGGTGAAAACCGAGACGAAAACGGAAAAGCTGATCATCAAAACGGAGAGCATGACCGTGGAGACCGAAGTGTCGACCGTGATAACCCAGAGCAGTCCCGTCAAAGTTGAATACTCCACCGCGAAATGCGAAACCACCTCCCCACCAGCGGACTCCAACCCCGACAAGACTAGTGAGAATGTGACGATATCTGTGAAAATCGAAGCGAACCTCGTGAAGACCGAGAGCTGTCCCGTCAACTCCGTGGTGAAAATCGAGAACCTGTCCAACACCGTCAAAATCGAACCGCCCGAAATCAAAACCGAACGCGAAGAAATCAAACGTGAACCAGAACAAACCGAGCCGACAAGTACAACGACGCCCCCCGTCGCTCCTAGATCTCCCGCGGTTGACGTCAGCCTACCCGTCGAAGGCAAGGAAAACATACCGCTCCTGAAAGCCAGAGACCTGGAACCCCCATCCAAGCCAAGCCCAGAAGTCGAAATCCACTTCAAACCCAAACTGCCGGAGGCAGACCAAGAGATGGACCCCTGCCGAATAAAGAGGCGCAAGCTCGACATACTGAAAGAGGGCGGGCTAGAGGTCACCCCGGTGAGGTCAAGCTCGTACAAAGACCTCAGGCCGTCCGTCATCCAGATATCGACGCCCCCCGCTCAGAGGTTCGAGGGGATGCCCCCTCCGGCGCCAGTGAGCACCGCACCCCACAAACGCTCGCCCATCAACAAGAGCGCGCCTGGCACCCCGATAAAAACACCCACCCCGCCCTTCCTAGCCGACTCCACCCCGCCCAGGGTGTTGCAGTCGCGCTCCATCTACTCCTACTCCGAGAAAGTCGTGTACGGCAACCCCAAGGACATCTTCGCCCCAGCCGCCCCCAGGTTCGCCCACAGGCAGCCAGGTGGCGACCCGGTGGACTTATCCGTCAACAGTCCCCAGAAGCCCGCCCCCGAAGCGATGGGCGCGCCCCCCAGCACGCCGCACAACCGCGACACGGTCACCAAGAACCTCTACAGGGCTTCGGGGGCTCAGCTAGTGGGCGGGCGCCGATTGGCGCCCAACCTGGAGATCACGTTGGTGGGCCCCCAGAGGACGCAGTCGCGGAAACGCGAGGCCGTCGCTAGGATgccgccaccgccgccgccgCAGGCGTCGTTCTCTCCCTATCTCGCTCAGTTGTATGAGCAGGTGAGCAAGGGCCTGCCGCCGTACTTGCCCTTCGTGGATCCCACGATGTACTACACGGCGGCCATGCAGAGCATGTACTCGGGCGGTGGGGGCGGGCAGCAGCCGCCCATGGTGCCGATCGCGACACCCGAGCAGTTGAAGCTGTATGCTGAATTGATGGCGCATGGGAGGCTGCCCTTTCCCTTTTCCCTGCAGACTGATGGCAATTCGAAGAAGCAGTGA
- Protein Sequence
- MSLSEIKSVLFFFQDEILAISEKVVIRVEDLVTWITTEAEWTWGRLAKSVEDVGPGGHEEGGGVPPKSAAGMCFSLTDNGLDFSDVESERKNCEPPTEPSPPRVIILSYPKYCRYRAAMRRLDAADASLLQRRDVLALGAFYVAQPCTRVLFCRDTFDYPELEGHDMLCNHLAPKLKGRPRGRRRKRGASPQGSEGNESEASVGGGGGSGGNARADNKNGLHGDSGVTPRRSTRCLENNENKEFVRKLGSFMKSNRTPIGRIPSLGYKELNLHEFFSRVQRLGGYDSVTGNRLWKSIFEEMSGHQNSTSAATIIRRHYERFLLPYERHVRGEEYKPIPGSARRRLKSKRGSNSSLSDADSSSCDSPPMPSTSTTMPSPTVSPSENKDNSRVEGKPSSLRSVRVKPERQKGKQSRDERDVVHNNNNNGESNSFQPTVKTETKTEKLIIKTESMTVETEVSTVITQSSPVKVEYSTAKCETTSPPADSNPDKTSENVTISVKIEANLVKTESCPVNSVVKIENLSNTVKIEPPEIKTEREEIKREPEQTEPTSTTTPPVAPRSPAVDVSLPVEGKENIPLLKARDLEPPSKPSPEVEIHFKPKLPEADQEMDPCRIKRRKLDILKEGGLEVTPVRSSSYKDLRPSVIQISTPPAQRFEGMPPPAPVSTAPHKRSPINKSAPGTPIKTPTPPFLADSTPPRVLQSRSIYSYSEKVVYGNPKDIFAPAAPRFAHRQPGGDPVDLSVNSPQKPAPEAMGAPPSTPHNRDTVTKNLYRASGAQLVGGRRLAPNLEITLVGPQRTQSRKREAVARMPPPPPPQASFSPYLAQLYEQVSKGLPPYLPFVDPTMYYTAAMQSMYSGGGGGQQPPMVPIATPEQLKLYAELMAHGRLPFPFSLQTDGNSKKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -