Chae010343.1
Basic Information
- Insect
- Chrysolina haemoptera
- Gene Symbol
- Zbtb41
- Assembly
- GCA_958298965.1
- Location
- OY282585.1:54704320-54711930[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.1e-05 0.0017 20.4 4.1 3 23 190 210 188 210 0.98 2 21 0.0013 0.21 13.8 0.7 1 23 219 242 219 242 0.90 3 21 1.2e-05 0.0018 20.3 2.6 1 23 254 276 254 276 0.99 4 21 0.0014 0.21 13.8 0.8 1 23 282 304 282 304 0.97 5 21 0.00031 0.048 15.8 3.1 1 23 309 332 309 332 0.93 6 21 0.019 3 10.2 0.8 1 23 356 378 356 378 0.93 7 21 1e-05 0.0016 20.5 0.2 2 23 383 404 382 404 0.97 8 21 0.62 95 5.5 4.0 1 23 410 432 410 432 0.90 9 21 3.4e-05 0.0052 18.9 0.9 1 23 439 461 439 461 0.95 10 21 0.0022 0.33 13.2 2.2 1 23 466 488 466 488 0.98 11 21 2.9e-05 0.0044 19.1 4.3 1 23 493 515 493 515 0.98 12 21 0.58 88 5.6 5.4 1 20 556 575 556 578 0.92 13 21 0.00051 0.079 15.2 1.5 1 23 584 604 584 604 0.98 14 21 6.3e-05 0.0097 18.0 3.1 1 23 610 632 610 632 0.98 15 21 0.0098 1.5 11.1 1.0 1 23 638 660 638 660 0.96 16 21 4.2e-06 0.00065 21.7 1.1 1 23 666 688 666 688 0.99 17 21 6.9e-05 0.011 17.9 0.6 1 22 694 715 694 715 0.96 18 21 8.4e-05 0.013 17.6 3.2 1 23 722 744 722 744 0.97 19 21 0.00023 0.036 16.2 4.9 3 23 749 769 748 769 0.97 20 21 2.8e-05 0.0043 19.1 0.7 1 23 775 797 775 797 0.93 21 21 0.00016 0.024 16.8 1.2 1 23 803 826 803 826 0.97
Sequence Information
- Coding Sequence
- ATGGAAGTTGAATATGAACAATTGGATACTCAATTCAAATGTGAGAAATATGATATCGAACCAGTGGATGAATCTGATCTATTATGTTTCATAAGCAATGTTGAATACTTGCCATCAAATAGCTTCGTAGAAACACTAATAATAGAAATAGTTGAAGATGAGGATGAACTCATTAGAGACAGTATTAGTCCCAAATCTGAAGAAAACACGCCACCAGAATGTGAACTAACAGTACCAGCCAATATAAAAGAAGAACTTTTTGAGAATGTTGAGACAGAGTACTTCACTTTCAAGAACGAGCAAGAATTTAAACAAGAAGTTGATGAAATTACAGATTTCACTGAAGAACAAGTTGAAAATGAATCCTTGAAAGATTACGATGTTGGAAAATTGAATAATGTAGACAGTGAAAGTATGAGGAAAGGATCAAATGAATATGTTAATGGAAATGATCCTGACTATTATCCAATAACAGATTCAAGCAGTGGCTCCGAAACAGACAAAGATTTTGCTTCGAACAGTTTTGAAGAAGAAACGAGACACTCTCCTGTCAAAAAGCATTTTTGGTGTCCAgtctgtaaaaaatctttttcaaGGCGATACCATCTGAATAGGCATTTCACCACTCACTCAGCGAGAAGCACAAAGCAACAGTTTAGTTGCAAGATGTGTGGCAAACGTTTCACCTGGATGCGAAATCTAAAGAATCATGTTGAAGATGTTCACCCCAAAGAAAGAATCAAGGTTATAGATGAGGAGTACCAGTGCTACCATTGTGGAATGGTTTATTCAAAAAAGCAGCTTTTGGTGAAGCATATGAAGGTTCACAGAAAAAAGAAACCTTTTGAATGCACTGTATGTCAGGGAACATTTGAAACAGAGCATACTTTGAAGTGGCACCAGGTGGTTCACTCAAGAGACCATTACCGATGCCCTGTTTGTGAGCAGAGCTTTTCGAAGCTCCACAATTTGATGAGCCACAGGTTTCAGTTCCACCGTCAAGGAGCAAGTGAGGATAACATGGAGAGAACGATTTGTCCTGATGATGAATCTGACGAAGGTCCTTTCTTATGCGATATTTGCGGAGAGTCCTTCTCGTTGATGAAGTTTATCAGAAGGCATAAACTTTCACACGAGAAACCATTGCAGTGTGAAGTTTGCGGGAATCGATTCACTAGTCAAGCTGGTCTGCTACGTCATTTGCGTTCTCACTTGGACAAGGCCAAGTTCCACTGCGATATTTGCGGCAAGAGGTTTTTGCTAAAGAGTATATTCTTGCGTCACAAGAAGAAGCACGCACAAGAGCCAGGGTCGTTTCTCTGTGACACTTGTGGAAAATTGTTTGTGACAAAAGACTTGTATTTCCAACATATGCGAATCCACCGAAAGAAAGCTTTCGAATGTCACATTTGTGGCCAATACTTCTCTCTGGTCGAGTTTTACAACGATCACATGAAACGTCATGTGAAACGGCTTTTCAAATGCACCTTGTGTCCTTTGGATTTCACACGCCATGATCACCTGAAGAGCCACATGCAGATACACGAGCAGGAAACCAACTTGAGTCTCTTGAAGGAAGGTCAAATAGAATCGACTCGAACTTTGGGAAGCAGAAGAAAGTCCCTCTCTCGTTTGGAGCCGATGAAAGTCAAAGAAAAAGTCCCGCACCGCTGTAAAATCTGCGCGAAAACCTTTCCATTCAAGAGCGTCCTATTCTATCATGAGAAATGCCATTCGAGAGTCCAATCCTTCAAATGCCCAGTTTGCTCGAAAACACTGAAGACGAACCTGGAGAGACACATGAAAACTCACTCGGAAGAAAAACCTTTCGAGTGCTCGGTCTGCAAGAAACGTTTTCGCATAAGAGACCAGATGTACAAACACATGAAAACCCACGCCGTGGAGCCGCCTTTCACCTGCTCGAAGTGTTCCAGGGGTTTTTTCTCAAGCTTCGCGCTTGCGCTGCACAGGGGATCCCACTCTGACGGCGAACCGTACCAGTGTAAGGTCTGCGACAGGAAGTTTTATCAAATGTCACTGCTGGAAGCGCATCTGAGGCAGCACACCGGAGACAAGCCCTTCCAGTGCGAGATATGCGAGAAGAGGTTCATCATCAAAGgttctTTGCAAAAGCACCAGAAGAAAAACCTCGAGAAGCAGTCGTTTCCTTGCCCCAATTGTAAAAGGCAGTTCTGTTTCAAGAGAGACCTTACGGCTCACATGAAAGACCACAATGGTAACTGCTGCTCTTTTTGCGGAAAAAAATTCCATGATCAATACGGCTTGAAAATACATATAAGGTCGCATACCGGGGACACTCCGTTCGAGTGCTCTGTATGCAAGAGGCGGTTCACCACTCAAGGTACTCTCAACAGACACGCAGTCTTGCATACAGAAGATAAGCCGTTTGAGTGCCGAATTTGCATGAAAAGTTTTCGGCGCAACGGGCATTTAATAGGGCATATGGAGAGAATCCACGGGGTAGGAAGAGTTTTCAAGAAAACTGGTCAAGATGTTACGGCGACGCCGGTCAAGAAAAGAGTTATCATCAAAGTGATTTCTGCTAAGAAAATGAAGACAGCTTAG
- Protein Sequence
- MEVEYEQLDTQFKCEKYDIEPVDESDLLCFISNVEYLPSNSFVETLIIEIVEDEDELIRDSISPKSEENTPPECELTVPANIKEELFENVETEYFTFKNEQEFKQEVDEITDFTEEQVENESLKDYDVGKLNNVDSESMRKGSNEYVNGNDPDYYPITDSSSGSETDKDFASNSFEEETRHSPVKKHFWCPVCKKSFSRRYHLNRHFTTHSARSTKQQFSCKMCGKRFTWMRNLKNHVEDVHPKERIKVIDEEYQCYHCGMVYSKKQLLVKHMKVHRKKKPFECTVCQGTFETEHTLKWHQVVHSRDHYRCPVCEQSFSKLHNLMSHRFQFHRQGASEDNMERTICPDDESDEGPFLCDICGESFSLMKFIRRHKLSHEKPLQCEVCGNRFTSQAGLLRHLRSHLDKAKFHCDICGKRFLLKSIFLRHKKKHAQEPGSFLCDTCGKLFVTKDLYFQHMRIHRKKAFECHICGQYFSLVEFYNDHMKRHVKRLFKCTLCPLDFTRHDHLKSHMQIHEQETNLSLLKEGQIESTRTLGSRRKSLSRLEPMKVKEKVPHRCKICAKTFPFKSVLFYHEKCHSRVQSFKCPVCSKTLKTNLERHMKTHSEEKPFECSVCKKRFRIRDQMYKHMKTHAVEPPFTCSKCSRGFFSSFALALHRGSHSDGEPYQCKVCDRKFYQMSLLEAHLRQHTGDKPFQCEICEKRFIIKGSLQKHQKKNLEKQSFPCPNCKRQFCFKRDLTAHMKDHNGNCCSFCGKKFHDQYGLKIHIRSHTGDTPFECSVCKRRFTTQGTLNRHAVLHTEDKPFECRICMKSFRRNGHLIGHMERIHGVGRVFKKTGQDVTATPVKKRVIIKVISAKKMKTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -