Basic Information

Insect: Chrysolina haemoptera
Gene Symbol: zfh1
Assembly: GCA_958298965.1
Location: OY282587.1:9169827-9183570[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0011 0.17 14.1 0.9 2 23 59 80 58 80 0.97

2 27 0.11 16 7.9 1.3 2 23 86 108 85 108 0.94

3 27 2.7e-05 0.0042 19.2 3.9 2 23 115 137 114 137 0.95

4 27 0.014 2.2 10.6 5.3 1 23 143 166 143 166 0.95

5 27 0.0012 0.18 14.0 0.7 2 23 172 193 171 193 0.97

6 27 0.0023 0.35 13.1 4.9 1 23 202 224 202 224 0.98

7 27 0.00032 0.049 15.8 1.4 1 23 231 253 231 253 0.97

8 27 1.2e-05 0.0018 20.3 1.4 1 23 259 281 259 281 0.98

9 27 5.1e-07 7.8e-05 24.6 0.2 1 23 287 309 287 309 0.98

10 27 0.0019 0.29 13.4 3.5 1 21 322 342 322 343 0.95

11 27 1.6 2.5e+02 4.1 0.1 2 23 352 373 351 373 0.91

12 27 0.0004 0.061 15.5 1.1 1 23 379 402 379 402 0.92

13 27 0.023 3.5 10.0 1.5 2 23 409 431 408 431 0.93

14 27 0.0023 0.35 13.1 1.8 1 23 436 458 436 458 0.95

15 27 9.2e-07 0.00014 23.8 4.2 1 23 467 489 467 489 0.99

16 27 4.8e-06 0.00074 21.5 0.2 1 23 496 518 496 518 0.98

17 27 0.00045 0.069 15.3 6.1 1 23 524 546 524 546 0.97

18 27 4e-07 6.2e-05 24.9 0.8 1 23 552 574 552 574 0.98

19 27 8.7e-05 0.013 17.6 4.9 1 23 601 623 601 623 0.98

20 27 0.19 29 7.1 0.2 1 23 638 661 638 662 0.94

21 27 0.0017 0.26 13.5 4.5 1 23 667 690 667 690 0.95

22 27 0.00034 0.053 15.7 0.3 2 23 696 718 696 718 0.90

23 27 0.0019 0.29 13.4 0.7 2 23 726 747 725 747 0.97

24 27 0.00042 0.064 15.4 0.5 1 23 754 777 754 777 0.97

25 27 1.9e-05 0.0029 19.7 0.6 1 23 783 805 783 805 0.98

26 27 2.4e-06 0.00037 22.5 0.2 1 23 810 833 810 833 0.98

27 27 0.0074 1.1 11.5 1.8 1 20 839 858 839 860 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0011	0.17	14.1	0.9	2	23	59	80	58	80	0.97
2	27	0.11	16	7.9	1.3	2	23	86	108	85	108	0.94
3	27	2.7e-05	0.0042	19.2	3.9	2	23	115	137	114	137	0.95
4	27	0.014	2.2	10.6	5.3	1	23	143	166	143	166	0.95
5	27	0.0012	0.18	14.0	0.7	2	23	172	193	171	193	0.97
6	27	0.0023	0.35	13.1	4.9	1	23	202	224	202	224	0.98
7	27	0.00032	0.049	15.8	1.4	1	23	231	253	231	253	0.97
8	27	1.2e-05	0.0018	20.3	1.4	1	23	259	281	259	281	0.98
9	27	5.1e-07	7.8e-05	24.6	0.2	1	23	287	309	287	309	0.98
10	27	0.0019	0.29	13.4	3.5	1	21	322	342	322	343	0.95
11	27	1.6	2.5e+02	4.1	0.1	2	23	352	373	351	373	0.91
12	27	0.0004	0.061	15.5	1.1	1	23	379	402	379	402	0.92
13	27	0.023	3.5	10.0	1.5	2	23	409	431	408	431	0.93
14	27	0.0023	0.35	13.1	1.8	1	23	436	458	436	458	0.95
15	27	9.2e-07	0.00014	23.8	4.2	1	23	467	489	467	489	0.99
16	27	4.8e-06	0.00074	21.5	0.2	1	23	496	518	496	518	0.98
17	27	0.00045	0.069	15.3	6.1	1	23	524	546	524	546	0.97
18	27	4e-07	6.2e-05	24.9	0.8	1	23	552	574	552	574	0.98
19	27	8.7e-05	0.013	17.6	4.9	1	23	601	623	601	623	0.98
20	27	0.19	29	7.1	0.2	1	23	638	661	638	662	0.94
21	27	0.0017	0.26	13.5	4.5	1	23	667	690	667	690	0.95
22	27	0.00034	0.053	15.7	0.3	2	23	696	718	696	718	0.90
23	27	0.0019	0.29	13.4	0.7	2	23	726	747	725	747	0.97
24	27	0.00042	0.064	15.4	0.5	1	23	754	777	754	777	0.97
25	27	1.9e-05	0.0029	19.7	0.6	1	23	783	805	783	805	0.98
26	27	2.4e-06	0.00037	22.5	0.2	1	23	810	833	810	833	0.98
27	27	0.0074	1.1	11.5	1.8	1	20	839	858	839	860	0.95

Sequence Information

Coding Sequence: ATGTCCCAGCTGATTCAAGATCACTGCaacgagagaaaaaaaaaagtggtggGCGGAGTGTCGCATTTTTCTGCAGTTTGTCATATGTTTGGAATAACATTTGCTAGTTGGTACGAGGAGCATTGCGAAGAATGTTCTTGTAGAGAAATCTGgcccGCTACCGATCAACTCATCGAATGTAAAGTGTGTCAGAAAAAGTTCGACAGTTTGGGAAAACTAGGAAGACACTCGAAAACCCACAAAGAAAAATCACTCACGTGCGACTTGTGTCATAAAAAGTTCAAGTGGCCAATGAGCTTGGACTTGCACGTAAAAAGAGACCACCTGAAAGATTTCTCGTGTCAGTGTCAGAtttgcgataaaaaattcattcacaATGCCCAATTAAAAAGCCATATGGACAAGGTGCACCTGCagatatacaaattcagttGCCACAAGTGTGCTAAAGGCTTCAGGTACCAGTTCGAATATGATAAACATATGAAATTCCAACATGAAGGGCTGAGGTTGCGATGTGCGCAGTGCAAGAAGGAGTTTAAAGACGAGCCTTATTTTCGAGAGCATTTGAAAATCCACGATCCAAGTTACGAAAAAACCTCTTACTCTTGTCCTTACTGTGGCAACATCTACCACCACTACAATTCCTACACCAGACACATGAAAATCCACACCGGGGAGCAAAGAGAGCACATTTGCGATATCTGCGGGAAAATTCTGTGCTCCGGTCCTAGCTTGAAGATGCACATGAGAACCCACACGGGGGAAAAACCCCACAAATGTGCAATTTGCGGAAAGGGATTTGCTAACGCTGCGACTTTGCACATTCACAAGCGGACGCATACCAAAGAGAAACCTTACGTTTGTAACGTTTGTCAGAAAGCTTTCAGTCAGAAACCCGCGTTGAACGTTCACATGAAGTCGCATACAGAAATATGTTTCAGGGAAGCCCAGAACGAAGTTTTCACATGTCCCACTTGTCCAAAAGTATACGTCTTCAAAAATCAGTTGCGCAATCATAGATGCCATACGCAAAAATTGAAAAGGCTGGTAACGTGTGACATTTGCAACATAACGGTCATTGCGCAAAATCTCCGAGCCCACGTGGAAAGAAAGCACTTGAACGAATACGCGTTCAGCTGCACACTGTGCGACAGAAAGTTCAGTCACGCCATTTATCTAAAAGTCCACGTGGATAATATTCACTTCAACAGATACAAGATTCACTGCGAGCTCTGCAATAGAGGTTTCAACTTCCCGAATGAGTTGGATAAGCATCGAAAATTCGAACACGAAGGTGCTAGACACTTCTGCGAAAAATGCCCGAAGATATTCAAAGACCGCGGACGTTTTAAGGTTCACGTGGCTTCCCACGATCCGGACTACGTGGAACCCATCTATGAATGTCCAGAATGCGACCAGAGCTTCAAACAGAAGCATTCGTACAACAAGCATTTGAGGAAACACGGCGGCGAGAAGTTTGAGTATGTTTGCGATACCTGTGGTAGAGTCACCACCACTCAGACAAGCTTGAGGGAGCACATGCTCATTCACACAGGGGAAAAACCGCATAAATGCGAGGTTTGTGGTAAGAGcttcaacaaaaaatgtttgctgatgacacaCTTCAGACTGCACACCAATGAGAAGCCGTATGAGTGTACCATTTGCCAGAAAACTTTCACTCAGAAGCCAGCATTGAATGTGCACATGAAATATCATACAGGAAAAAATTTGCACGAGTGTAAAGTTTGCAGAAAGAAGCAAGACGTCAAACGTGAAAGCGATGACGACAAATCGTACCGCTGCGAAAACTGTGGCAAGGAATGCTCCAGCtggcaccaattgaaaactcACTTCCGGGGCCACGAGACCTCCACCAAGCGCCAAATCGCCATAGAACTCGAAGAATTCCGATGCGAGTTCTGCGCCAAGCTGCTCGGAGATAAAGGCACGCTCGCAAGGCACATTGCCGAAGCCCACCACCGAGAGACGAGATTCAACTGTTACAACTGCGACCAGAAATTCTACCACAAGTATATGCTAGTGCGGCATATCAAGGAGAAGCACGCGGGTAGGCCTCCTACGTGTGACATCTGCGGACTGGAGTTTTCCACGTACGCAACATTGCGCAGACACGTCACCGACAAACACAACGTTGACTACCGCGATTTGTATTGTTACGAATGCAAGAAGGCCTTCGTCGGAGGCATCAGCTACAGGAAGCACATGAGGAAGCACACCGACGACGGCGCCAAGTTCGTATGTACGGTTTGCGGCAAAATTCTGTCCTCGATGTCCAGCATGAGAGATCACATGACGCGACGCCACAGCGAGGAAACGCCGTACGAGTGCGATCAGTGCGAGAAGGCGTTTACCACCCCCTTGTCTTTGAAAAGTCATAAACTAACTCATGTCGGCCCGTCTTTCAAATGTGAGCTCTGCGACAAGCAGTTCATCCAGCCGGCTTCGTTGAGAATCCACATAAAAAGAGTGCATGTTAAAGTGCGACCCCATCAGTGCGATATTTGTATGAAGTTTTTCGCGACAAGGACGGAGTTGAACAAACATCACGTGAGGTGTAAAGGGCCAAAGCGAGAGAAAGAATCAAAGCCTGATAATATTATCGCTGTTGGTCCCAACACTGTGGTTACGAGTGGTGAATCAAATCAGTAA
Protein Sequence: MSQLIQDHCNERKKKVVGGVSHFSAVCHMFGITFASWYEEHCEECSCREIWPATDQLIECKVCQKKFDSLGKLGRHSKTHKEKSLTCDLCHKKFKWPMSLDLHVKRDHLKDFSCQCQICDKKFIHNAQLKSHMDKVHLQIYKFSCHKCAKGFRYQFEYDKHMKFQHEGLRLRCAQCKKEFKDEPYFREHLKIHDPSYEKTSYSCPYCGNIYHHYNSYTRHMKIHTGEQREHICDICGKILCSGPSLKMHMRTHTGEKPHKCAICGKGFANAATLHIHKRTHTKEKPYVCNVCQKAFSQKPALNVHMKSHTEICFREAQNEVFTCPTCPKVYVFKNQLRNHRCHTQKLKRLVTCDICNITVIAQNLRAHVERKHLNEYAFSCTLCDRKFSHAIYLKVHVDNIHFNRYKIHCELCNRGFNFPNELDKHRKFEHEGARHFCEKCPKIFKDRGRFKVHVASHDPDYVEPIYECPECDQSFKQKHSYNKHLRKHGGEKFEYVCDTCGRVTTTQTSLREHMLIHTGEKPHKCEVCGKSFNKKCLLMTHFRLHTNEKPYECTICQKTFTQKPALNVHMKYHTGKNLHECKVCRKKQDVKRESDDDKSYRCENCGKECSSWHQLKTHFRGHETSTKRQIAIELEEFRCEFCAKLLGDKGTLARHIAEAHHRETRFNCYNCDQKFYHKYMLVRHIKEKHAGRPPTCDICGLEFSTYATLRRHVTDKHNVDYRDLYCYECKKAFVGGISYRKHMRKHTDDGAKFVCTVCGKILSSMSSMRDHMTRRHSEETPYECDQCEKAFTTPLSLKSHKLTHVGPSFKCELCDKQFIQPASLRIHIKRVHVKVRPHQCDICMKFFATRTELNKHHVRCKGPKREKESKPDNIIAVGPNTVVTSGESNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -