Basic Information

Insect: Chrysolina haemoptera
Gene Symbol: NRG1
Assembly: GCA_958298965.1
Location: OY282587.1:36638987-36649452[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6 1.1e+04 -1.8 0.1 11 22 18 29 16 30 0.80

2 13 0.061 1.1e+02 4.6 0.1 12 38 139 166 131 170 0.86

3 13 0.06 1.1e+02 4.6 2.9 6 41 216 248 215 250 0.82

4 13 0.0017 3.1 9.6 0.7 19 36 257 271 252 277 0.79

5 13 0.11 2.1e+02 3.8 2.5 14 38 280 301 273 306 0.76

6 13 0.029 54 5.6 1.5 14 27 331 344 325 351 0.82

7 13 0.025 46 5.9 4.0 6 40 351 382 348 385 0.87

8 13 0.14 2.6e+02 3.5 1.2 17 29 390 402 379 413 0.73

9 13 0.00035 0.67 11.8 1.4 4 28 406 429 403 438 0.85

10 13 0.0033 6.2 8.7 1.5 10 27 440 459 432 470 0.80

11 13 0.2 3.7e+02 3.0 2.7 11 31 472 492 462 498 0.82

12 13 1.8e-05 0.033 15.9 2.1 13 44 502 530 493 530 0.84

13 13 1.8e-05 0.034 15.9 5.5 16 44 534 559 531 559 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6	1.1e+04	-1.8	0.1	11	22	18	29	16	30	0.80
2	13	0.061	1.1e+02	4.6	0.1	12	38	139	166	131	170	0.86
3	13	0.06	1.1e+02	4.6	2.9	6	41	216	248	215	250	0.82
4	13	0.0017	3.1	9.6	0.7	19	36	257	271	252	277	0.79
5	13	0.11	2.1e+02	3.8	2.5	14	38	280	301	273	306	0.76
6	13	0.029	54	5.6	1.5	14	27	331	344	325	351	0.82
7	13	0.025	46	5.9	4.0	6	40	351	382	348	385	0.87
8	13	0.14	2.6e+02	3.5	1.2	17	29	390	402	379	413	0.73
9	13	0.00035	0.67	11.8	1.4	4	28	406	429	403	438	0.85
10	13	0.0033	6.2	8.7	1.5	10	27	440	459	432	470	0.80
11	13	0.2	3.7e+02	3.0	2.7	11	31	472	492	462	498	0.82
12	13	1.8e-05	0.033	15.9	2.1	13	44	502	530	493	530	0.84
13	13	1.8e-05	0.034	15.9	5.5	16	44	534	559	531	559	0.88

Sequence Information

Coding Sequence: ATGAAAATAGAAATTAATGTAAATCCTATGTTACTTTCTAATAACAGTGTATCTATCAAAAATTTTGGAGCTATTTGCCGAGTCTGTTTACTCTCCAATAATTTGTTACCATTAATTTCTTGGgaagttgaaaatatatttgaaaaaataacgaaCATTAAGTTTAGAATGAACGAGGAACTTCCTGGAAATATTTGTGAAGGCTGCAGTAGGCAACTCAATGCAGTCGATCGATTCATAGAGAAATGTAAAAGTAATCATCACCTTCTTATGCTCAAGTTAGAACAACAATACCAAAGTGACGAAATTCCGGATTCATTCTGCTTTgataatgaagatttttcagTTGAAACTGAAAATAAGGTGATGATAAAGAACCTTGAAAATCTTCCAGACAAACAAGAACTGGAAAAGAAAAcgaacaaaatttttgaatgtgcAAAATGTGAAGCAAGTTTTAGACAAAAGTTGTCATTggtgaatcatttgaaaaaacatgctgaaaatgaaaaatattttaagacTGGTATAAAAAACTTTAACAGACCTTCGTTAAAGCATAAACATGCTATATATAATGTCAAAAAGTACAAATCTGATGGCAGAAAAGCTACCAGAAAATctgtttcaaaaacaaatatagAACATGTACTTCAGGCGAAAACAATCAAATCAAAGTACCACTGTTCCCAGTGCAATAGAGATTTAACTTCTCGGTCAGCTCTCTCCAGTCACATGAAAACTCACACTGGTGAAAGGCCATACTCTTGTTTGTATTGCGGTAAAACATTTTCCTACACAAGCAGCCTTACCGTACACACAAGATTACATACAGgGGAAACTCCGTATGTATGCTCAATATGCAATAAAGGTTATAGAAGTTCTACtagtttgaaaaaacacaaagaAGTCAAGCACTATGAGATCGAAGACAGCATAGAAGGCAGTAGTGGGGTTgacaaaaaagaaaatgaaaagaattTAAAAGTATCCAACAAACAAGAGTGCAATATTTGCCATAAATTACTGAATAAATATGGATTTGGTACCCATATGAGAATACATACTGTTAAGAAGAAACAATTCATGTGTGAATTTTGTaacaaacaatttcaaaaaaattcacacTTGGAAAGGCATATTAGAATACACACTGGTGAACGGCCTTACAAATGTGAATTGTGCAATAAGACCTTTGTACAAGATGGAGACTTGAAAAGACACATTTCGATTCATTCTggcgaaaaaaaatttcaatgtcaACATTGTGGCAAACAGTATTTCACAAAGGGAGCCTTAGCTACTCATATATCTATTCATGAAGTCGCAAGAAAAACATCAAACATCACTTGCAATATGTGCGAGAAAACTCTTGATCAATGTAGTCACAACAAGACTGTCAGCAGTTCTCATAAGGAATGTAATAGgaaatactTATGTacaatttgtggaaaatcgTTCACAGCTAGTGGAAGTCTCAAGGTACACACCAGAATACACACCGGTGAAACACCATTCACATGTACATTCTGTAACAAAGGTTACAACAACTCAAGTGCTTTGAGAAGACATGTCATCAGAAATCACAGTGAGGAAAAAACACATATCTGCATGATTTGCCACAAAAGTTTTCATGACTCTTCGAATTTAAAACGTCATGTCAGGAGAGTGCATTCTGTtgttgaaatgaaactaaattaTGCTGTATCTCAAGAACCTGATAAATGA
Protein Sequence: MKIEINVNPMLLSNNSVSIKNFGAICRVCLLSNNLLPLISWEVENIFEKITNIKFRMNEELPGNICEGCSRQLNAVDRFIEKCKSNHHLLMLKLEQQYQSDEIPDSFCFDNEDFSVETENKVMIKNLENLPDKQELEKKTNKIFECAKCEASFRQKLSLVNHLKKHAENEKYFKTGIKNFNRPSLKHKHAIYNVKKYKSDGRKATRKSVSKTNIEHVLQAKTIKSKYHCSQCNRDLTSRSALSSHMKTHTGERPYSCLYCGKTFSYTSSLTVHTRLHTGETPYVCSICNKGYRSSTSLKKHKEVKHYEIEDSIEGSSGVDKKENEKNLKVSNKQECNICHKLLNKYGFGTHMRIHTVKKKQFMCEFCNKQFQKNSHLERHIRIHTGERPYKCELCNKTFVQDGDLKRHISIHSGEKKFQCQHCGKQYFTKGALATHISIHEVARKTSNITCNMCEKTLDQCSHNKTVSSSHKECNRKYLCTICGKSFTASGSLKVHTRIHTGETPFTCTFCNKGYNNSSALRRHVIRNHSEEKTHICMICHKSFHDSSNLKRHVRRVHSVVEMKLNYAVSQEPDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00329901;
90% Identity: iTF_00329901;
80% Identity: iTF_00329901;