Chae040562.1
Basic Information
- Insect
- Chrysolina haemoptera
- Gene Symbol
- lov
- Assembly
- GCA_958298965.1
- Location
- OY282595.1:19467182-19468694[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-18 2.2e-15 57.8 0.0 1 44 37 80 37 81 0.96
Sequence Information
- Coding Sequence
- ATGACAGACCCCAGAACGACGCCAGAGTCTCAAATGTTCGTTAAAAAGAAGAtggGAAGACCAAAAGGTCAACACTCCGCCCCCCGAGGAGGTCCTCCTCGGTCTTGGACGAACGCCGAACTCACAGAAGCTCTCCAACATGTCTGGAATAAGAAGATGACTACAAGCCAAGCATCCAGAATATTTGGCATTCCATACAACTCTCTCCTCATGTACGTTCGAGGAAAATACGGTAAAAGTCTCAAATTGGAGCAGCTACGAAAAGACTGTATAGCGGGGCCTAATCACTCGATGGACCTACTCAACATGACGGGTggaaacaataataacaatacctGCAAAACCGAAAGAGAAGTCGAGCAAATCCAGCCGAATACGAGGCCACCAAGCACCGAAGATCAGACTCATCCCCAACCTCCCGTTTTTAATCCTTTCGCGCATAATTTCTATCCGGATTTTGGTACGGGGTTTCCCATACCCGTGAGCATGATTCATCTGTTACCGCAGAGCGAAAAAAGTAGAGAACACTACAGCCAACAGCAGTCTATGGAAGAAGACTGTAAGCAACGAACGAAAGAAATCGAGGACGAACAAGTTATATTCCGGCCTGGCTCGCTATCTATCGAAGATAGGCGAGAACTAGTACAACAGAATGGTCAGAATTGA
- Protein Sequence
- MTDPRTTPESQMFVKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIAGPNHSMDLLNMTGGNNNNNTCKTEREVEQIQPNTRPPSTEDQTHPQPPVFNPFAHNFYPDFGTGFPIPVSMIHLLPQSEKSREHYSQQQSMEEDCKQRTKEIEDEQVIFRPGSLSIEDRRELVQQNGQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01567746; iTF_01047024; iTF_01289683;
- 90% Identity
- -
- 80% Identity
- -