Basic Information

Insect: Chrysolina americana
Gene Symbol: ZNF236
Assembly: GCA_958502065.1
Location: OY293413.1:12531740-12555000[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 1.3 2.2e+02 4.5 0.6 3 23 125 145 123 145 0.91

2 24 0.038 6.5 9.3 0.3 1 23 151 174 151 174 0.95

3 24 2.6 4.5e+02 3.6 0.1 3 23 182 204 181 204 0.87

4 24 0.029 5 9.7 1.3 1 23 210 232 210 232 0.97

5 24 0.023 4 10.0 5.3 1 23 242 264 242 264 0.97

6 24 1.9e-05 0.0034 19.7 2.7 1 23 288 310 288 310 0.98

7 24 5.4e-06 0.00093 21.4 1.7 1 23 316 338 316 338 0.99

8 24 5.6e-06 0.00096 21.4 0.3 1 23 344 367 344 367 0.98

9 24 0.15 26 7.4 2.2 1 23 377 400 377 400 0.93

10 24 1.7e-05 0.0029 19.9 3.6 1 23 496 518 496 518 0.98

11 24 0.0032 0.56 12.7 4.8 1 23 524 546 524 546 0.99

12 24 0.0056 0.97 11.9 0.3 1 23 550 572 550 572 0.98

13 24 6.5e-05 0.011 18.0 4.1 1 23 650 672 650 672 0.97

14 24 0.0076 1.3 11.5 3.1 1 23 678 700 678 700 0.98

15 24 1.5e-05 0.0026 20.1 0.4 3 23 708 728 706 728 0.97

16 24 2.4 4.1e+02 3.7 5.4 1 23 734 757 734 757 0.76

17 24 2.7 4.7e+02 3.5 0.1 3 12 965 974 963 976 0.88

18 24 0.0055 0.95 12.0 0.3 1 23 1024 1046 1024 1046 0.98

19 24 4.8e-05 0.0083 18.4 5.8 1 23 1053 1075 1053 1075 0.98

20 24 2.1e-06 0.00036 22.7 1.5 3 23 1083 1103 1081 1103 0.98

21 24 0.00016 0.028 16.8 2.6 1 23 1110 1132 1110 1132 0.98

22 24 0.13 22 7.7 4.1 1 20 1138 1157 1138 1161 0.89

23 24 0.0034 0.58 12.6 1.1 2 23 1323 1345 1322 1345 0.95

24 24 0.084 15 8.2 9.0 1 23 1351 1373 1351 1373 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	1.3	2.2e+02	4.5	0.6	3	23	125	145	123	145	0.91
2	24	0.038	6.5	9.3	0.3	1	23	151	174	151	174	0.95
3	24	2.6	4.5e+02	3.6	0.1	3	23	182	204	181	204	0.87
4	24	0.029	5	9.7	1.3	1	23	210	232	210	232	0.97
5	24	0.023	4	10.0	5.3	1	23	242	264	242	264	0.97
6	24	1.9e-05	0.0034	19.7	2.7	1	23	288	310	288	310	0.98
7	24	5.4e-06	0.00093	21.4	1.7	1	23	316	338	316	338	0.99
8	24	5.6e-06	0.00096	21.4	0.3	1	23	344	367	344	367	0.98
9	24	0.15	26	7.4	2.2	1	23	377	400	377	400	0.93
10	24	1.7e-05	0.0029	19.9	3.6	1	23	496	518	496	518	0.98
11	24	0.0032	0.56	12.7	4.8	1	23	524	546	524	546	0.99
12	24	0.0056	0.97	11.9	0.3	1	23	550	572	550	572	0.98
13	24	6.5e-05	0.011	18.0	4.1	1	23	650	672	650	672	0.97
14	24	0.0076	1.3	11.5	3.1	1	23	678	700	678	700	0.98
15	24	1.5e-05	0.0026	20.1	0.4	3	23	708	728	706	728	0.97
16	24	2.4	4.1e+02	3.7	5.4	1	23	734	757	734	757	0.76
17	24	2.7	4.7e+02	3.5	0.1	3	12	965	974	963	976	0.88
18	24	0.0055	0.95	12.0	0.3	1	23	1024	1046	1024	1046	0.98
19	24	4.8e-05	0.0083	18.4	5.8	1	23	1053	1075	1053	1075	0.98
20	24	2.1e-06	0.00036	22.7	1.5	3	23	1083	1103	1081	1103	0.98
21	24	0.00016	0.028	16.8	2.6	1	23	1110	1132	1110	1132	0.98
22	24	0.13	22	7.7	4.1	1	20	1138	1157	1138	1161	0.89
23	24	0.0034	0.58	12.6	1.1	2	23	1323	1345	1322	1345	0.95
24	24	0.084	15	8.2	9.0	1	23	1351	1373	1351	1373	0.97

Sequence Information

Coding Sequence: ATGTTGAACAATAGTCACAGAAACGTTTACAATGTAATGGATGATCTTCCCAGTCATATGGCTGTAAACTCGAAAGACAATACAAATTTTGGTCATATGGTGTTACCCAATGTTTTTGATGGCAAGGGATCAAATGAAGTCATGAAACAGGCAACTAGAACTATTGAGGTGGAAGATGAATCAGGACATCAAACTGTAAATGAACTAGAAGATATATTCACTTCAAGCAGTGAAGGATCTGAAACATATAGTGAAAATACTATAGTAGTGAACTTGCATCAGGGGCAGTTTCCTTCCACACATTTAGATGTAAACAAATTTGTCGAACCTCTTGCAGAAAAAACTGATCAAAGAAATCTTGTCAAACACATATGTATAAAGTGCGATGGTAAATTCGTTTCTTTGAACAAATACCAAGACCACTTGAGGTGgcacaaatgccagaaaaaattcaaatgtacCAAATGTCTCGCTGGATACAATGTAGAAAACAACTTGAAAATTCATATGATATTGAACCACCCAAGTGAAGATAATCGAAGTTGTCCTATTTGTAATGTTACATTGACATATCAAAGAGCAGCAGGTATGAAGTCACATTTGATGATACATCAAGTAGAGGAATTGCATTCTTGTGAAAAATGCCTAGCAGAATTTGAAAAAGAGgaTGATTATGTGAAGCACATGAAGTCACACAAATCAGGAGAGAGGGCCATTCAACCTTTCACATGTTCTCATTGCCAAGTTCACTTTGAAAATCGCAAAGACTACAGGTCCCACATCTCAGAACACCAAAGAGCAAGAAGAATTTTTGCCAAACCTAAAAGAACCCGTAAATATTGCCTTCCGGATGCAAAGCGTTTTCATTGCAAGATTTGTGACAAGAGTTTCATCAAGTTTTCTCTTCTGGAAAGACACGAAAGAATACATAGTGGAGAAAAGCCTTACCAGtgTGATCAGTGTGACCAAAGTTTTGCACAAAAAGGAACTTTACAAACTCATTATAAAAAGCACACTGGAAGTAGACCATTTGTTTGTACCATGTGCCCTGCGAAATTTGCCCAGAAAGGTAATTTGAAAGTTCATATAAGAAAAACCCATACATTTCCTGATAAAAGTGACAAAATGTACAAATGCCCTCACTGCACATGCATCTTCAAAAAAATCGCACCTCTGAATGGTCATGTGACAAAGGTTCATTTGAATAAATCAGGAGCtccagaaaatgtgttgttggATGTGATGAAAAATCTGAAGGAATTAGATAAACAGACGAACCAAAAAATAGTTCCAATAACGACAGAGCATGGTAATAAACCAGAAAACgtttctaaaaatgaaaaaatcgtaaGTGTATTGAAAGATGAATTCCAAAACAGGGGTTATGTGCAAGAGAAGTCTTTTGTTACCTTAACAGAATCGATTTATGATGGGTCAGTGAAGAAACATGTTGTCCAACATAAAAAAGTTGGGGATGTTCATTGGTATTGTTGTGAGTATTGCCCTAAACAATGTAAGAAACCTTCCGATTTGATAAGACACATCAGGGTGCATACCAAGGAAAAGCCTTTTAAGTGTAAACAGTGTATGAAGACATTTACATTGAAATCCACCCTACTTTCCCATAAAAAAACTCACAATACAAGTTTTAAATGCAATACATGTGATGCGGGATTTGGCTCAACCAGAGTGTTGAATAATCATATTCGggATCACGAATTCAAGAAACTCACAAAATGGGTATGTACTCTTTGTAAATGCATATTCGACGATTTTGAAAAGGCTCTTACACATAAAAAGGAGAATGGACAATCCCATGCTATCCAGTCTGTTTTAAACAGTGTCATCAAACAACCTCTGTACCACACAGTATATGGGAACCTGGTATTCAAACCACCGAGACCACGTATTCCAAATACTGGAACGGAATCACCTTCAAAAAGGCCTTTCCATTGTACCACCTGTGACGCAAGGTTCACCAGAAAAGTTAACCTCACTAGACATCTTCAATATCACGCTAACGATAGGAAATATAAATGTTATTTATGTCCTAAgACTTATATAACAGCTTGTCGATTGAAAGAACATTTGAATTAtcacaataatataaaaaaatacggcTGCAAGGTATGTAGCAAACGGTTCGTAACTCCGACACTTCTCAAGCGGCACATGATTATCCATAATACTAGCAAGCCATATATGTGCCCATACTGTTCAAAACACTACAAAACTATTCTGTTGTGTCGACACCACATCCAGCTGATTCACAAGAAAGATGCGTTACCGAAGTTTGTTGGTAAGGATCTGGTTGAATTTATAACTTCTGGAAACCATGCTTCTGAAGCACCAGAAACTGAATCAACTGATGGTGTCCTGGTGCCCTGTGATGAAGAAACCCCCATCACCGAGCCTATGACGTCTGATGCTCTTCTAATTCAGAAAGAGTTAGCAACCCAATCCACATCATGTGATGTCATCAAACCTGACTACTTGATAACACATGACGGTGGTGATTATCAGACCCTTTATGTAACTATGGAAGATTTGGAACTGCTGAAAAATTCCAACTTAGTTTTGGATTCATCGGTCAACTCTCACATGGAGTTATTGGTATGTACTTCAACAGCAAAGAATTCAGACAACTCACCTTCAGAACATATCTTAGATGGTTCAAATGTGGTACTCATTAATTCTAACACGGAACCTAATTTGGTCGATACCAATGTGTTACAATTGGATGGAGAAAACTTGTTGACGTATGACATGCACGCATTAAATGATCTGAACGTTCCAGTGGATGATTCTGAACAAATTTTTGGCAATAACGCAGTCTTACGTACTTCTTCACGTTTCagtgaaactgaaaatattttcgatgaAAACATAATCTGCATGAATTGCAATAAGGTGTTTTCCAATTTCGCTATCTTCCCAAAACACAGATGTGAAAAGAAAATTGCAAATGTTGATGGTACTACTAGTAGACCTGGAGATGTATTGAATGAAGAAGGCGCAAGCAAACATGTTCGTTCCAGACATCTAAAGAAGCATCCTAACAAAGGTGGTTACGAATGCGTCATTTGTGAATTGTTTTTCAGTGGAAAAACTGCATATCTGCAACACATGTCTTCGCACACGCCTTATGATAACTCACATACTTGtaaattttgcaacaaaatattcaaaaaagccTCGGATTTGGAAAGACACCATCGTGTACACACTGGAGAGAAACCATTTGGTTGTAACATCTGTAATAAAAGCTTTTCGTTGAAATCTACTCTGTTATCTCATATGAGAACCCACAACCCTAACAGCAAAGAATACAATTGTCATATCTGCAATTCATTCTATTCTTCGAGATCCAGCCTTCGAGTTCACATGTCAGTACATACTGgaCAAAAACCATTTTCTTGTCATTTCTGTAAGATGAAATTCAGAACATCAGCGAACAGGAAGTCTCATGAAGTTTTGAAACACACGAAGAAGAAAAAAGGCACAggagaactgaaaaataaaataacggaTGTTCTGGAGTCAGTTGCATCAGAAATGGCGGTAATAAATTGTCCCTGCAATCCGGAATCGGAGACATGTCATTCACAAGAAAGTACTCCTGTTCAGAATGATGATATAGCACCCGAACATGACCCGCAATTAGAAGAACCATCACAAATAATCAGCCTTGATGTAGTACCAGAGGATATGTTAACAACCATCTCTGAAGGCCAAATTACAATAGACCCTTCTCTACTACTTCATCAAATTCAAATGTCAGATATTGTTTTGACAACAGATGCAGCTCAACTCAATTCTTATATGTTCAATGAAGTCAGCTTAATAGATTTAGAGGGTTCCAGCAATAATCTCCAGATTATATCTTTACCACAAGCAACTGATGAAAATGGTGTCACTATCAGCATTAGCGAGGtggaggaaaaacaagagaGAAAAAACAGCATTCAATGCGACATATGTAAAAAGTTTTATGCCTCGAATAACGTTCTCAGAAGGCATAAGAAAAACTTGCATGGTGAAAAACCGAACTATTCCTGTTCGCAGTGTCACAAAAATTTTAGATCAAAGGTTACTTTCCTCAGGCATTGTAAAACACACCCAGAGCTCAATTTGTTATTGAATCAGGATGGTACAAATGAAGTCATAGAAGAAAGTCTGAACACTGATATGGAGAGGTAA
Protein Sequence: MLNNSHRNVYNVMDDLPSHMAVNSKDNTNFGHMVLPNVFDGKGSNEVMKQATRTIEVEDESGHQTVNELEDIFTSSSEGSETYSENTIVVNLHQGQFPSTHLDVNKFVEPLAEKTDQRNLVKHICIKCDGKFVSLNKYQDHLRWHKCQKKFKCTKCLAGYNVENNLKIHMILNHPSEDNRSCPICNVTLTYQRAAGMKSHLMIHQVEELHSCEKCLAEFEKEDDYVKHMKSHKSGERAIQPFTCSHCQVHFENRKDYRSHISEHQRARRIFAKPKRTRKYCLPDAKRFHCKICDKSFIKFSLLERHERIHSGEKPYQCDQCDQSFAQKGTLQTHYKKHTGSRPFVCTMCPAKFAQKGNLKVHIRKTHTFPDKSDKMYKCPHCTCIFKKIAPLNGHVTKVHLNKSGAPENVLLDVMKNLKELDKQTNQKIVPITTEHGNKPENVSKNEKIVSVLKDEFQNRGYVQEKSFVTLTESIYDGSVKKHVVQHKKVGDVHWYCCEYCPKQCKKPSDLIRHIRVHTKEKPFKCKQCMKTFTLKSTLLSHKKTHNTSFKCNTCDAGFGSTRVLNNHIRDHEFKKLTKWVCTLCKCIFDDFEKALTHKKENGQSHAIQSVLNSVIKQPLYHTVYGNLVFKPPRPRIPNTGTESPSKRPFHCTTCDARFTRKVNLTRHLQYHANDRKYKCYLCPKTYITACRLKEHLNYHNNIKKYGCKVCSKRFVTPTLLKRHMIIHNTSKPYMCPYCSKHYKTILLCRHHIQLIHKKDALPKFVGKDLVEFITSGNHASEAPETESTDGVLVPCDEETPITEPMTSDALLIQKELATQSTSCDVIKPDYLITHDGGDYQTLYVTMEDLELLKNSNLVLDSSVNSHMELLVCTSTAKNSDNSPSEHILDGSNVVLINSNTEPNLVDTNVLQLDGENLLTYDMHALNDLNVPVDDSEQIFGNNAVLRTSSRFSETENIFDENIICMNCNKVFSNFAIFPKHRCEKKIANVDGTTSRPGDVLNEEGASKHVRSRHLKKHPNKGGYECVICELFFSGKTAYLQHMSSHTPYDNSHTCKFCNKIFKKASDLERHHRVHTGEKPFGCNICNKSFSLKSTLLSHMRTHNPNSKEYNCHICNSFYSSRSSLRVHMSVHTGQKPFSCHFCKMKFRTSANRKSHEVLKHTKKKKGTGELKNKITDVLESVASEMAVINCPCNPESETCHSQESTPVQNDDIAPEHDPQLEEPSQIISLDVVPEDMLTTISEGQITIDPSLLLHQIQMSDIVLTTDAAQLNSYMFNEVSLIDLEGSSNNLQIISLPQATDENGVTISISEVEEKQERKNSIQCDICKKFYASNNVLRRHKKNLHGEKPNYSCSQCHKNFRSKVTFLRHCKTHPELNLLLNQDGTNEVIEESLNTDMER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00329877;
90% Identity: -
80% Identity: -