Came039790.1
Basic Information
- Insect
- Chrysolina americana
- Gene Symbol
- Rnaseh1
- Assembly
- GCA_958502065.1
- Location
- OY293416.1:532493-565781[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.061 1.6e+02 4.4 0.1 22 43 258 281 253 284 0.91 2 5 5.4e-11 1.5e-07 33.4 0.0 1 34 290 325 290 337 0.93 3 5 3.1e-08 8.4e-05 24.6 0.1 1 46 343 392 343 392 0.96 4 5 1.1e-06 0.0028 19.7 0.0 2 45 400 443 399 444 0.95 5 5 1.3e-10 3.4e-07 32.2 0.3 1 43 450 492 450 495 0.96
Sequence Information
- Coding Sequence
- ATGGACGACGAGGCGGATTTGAATAAAATGATTGAAGTTCTCAGGAATAGTAAGAAGGAAGAGACGGACCAATTCGAGTATGAAGGATTTATAAATTACGATGATAGTGATGTAGAAGAGTGTTTTGATGAAGACAATGCAGAAGACCTGGAAGAGATTGTAGCTCGTGATGATATTAACACTATAGACCTAAGCAATTTATACAAATACAACCCAATATCCTCTCTCAAACCTGAagagaaacaaattattgagTCCTGCACGGATccggatttaaaaaaaattctcctcTTAAACCGACAGAAGAACATGCAGCTCATCCAGTTGTATAAAAAAGTCAAGGATACGCTAATCGAGTGCAAGCAAAATATCGTAGAAAAGAACGAAATCATCAAACATTGTGCAGAAACAAATAAAGGTGCAAAGTATTCCGCTGGAATTTGGCGCTTGGGGGCCCCGTATTTCAAAGACAGGCAGCTCTACGGTTGCCCCTCCAACGAAGACACTTTGAAGAAGAGAAGAAATCGAGAACTGTCTATCTACGAGATAAGTCCTAGTGTAAAGTGGGCCAATCACGAGTGCGAAATGCTGACGAGAGCGATAAAAGTGAACTATAATATAAATCAGCAGAATGAGGTTAGACGGGCGATCAAAGAAGTTACTTCTAGAGGTGGAGAGAAGGAGGAACTGGCCGAGCTGACCGCAAGGCTCGATGAGCTTGATACTAACGACAACTGCGAAGTTCCAGCTTTGAAGTCGGACACGAACATCGATTGGTCTCGTGTGGCCGAGGTGTTTACCAAAGACAAACATTCAGCGTTCGAATGTCGGTCCGTGTGGCACATACATCTGCATCCAGCCTTCAACAAAGGCCCTTGGAGTAGTGAGGAAGATGAGAAGCTGCAAAAGCTCGTGTTGAGATACAACTATCAGCAGTGGGATAAAATAGCCGAAGAGCTAGGCTCGAACAGGTCGTGTTTCGCTGCTTGCAATCACTACTTCAGCAAGTTGCACTCTAAATTCAGACGGGGGGAGTTCGATTTCGCCGAAGACAGGAAACTGCTGGAAGTGATCAACAAGCATCGCATGGGGTCGTTTATACCGTGGGTGAAGGTGGTGAAACATTTCAAGAATAGAACGAGGGCTCAGCTGCATCACAGGTATACCTACTATCTCAGTCAGCATCACAAGAAGTTGGGTAAATTCTCAGACGCAGAAGACGTGCTGATAATGATATGCGTCGACAAGTTCGGCAGGAACTTCAGAAAGTGCACAGAGTACCTTCCGAAGCGGTCTTTGATCCAAATCAAGGCCAGGTACAGCTCGAATCTGACGAACTTCGTGAAGAAGGGCACGTGGTCGGTGGAAGAGGACAACATGATCATGAACCACGTGGAAAAGAAAGGCGCGTCGAATTGGACGGAGCTGTCCCAGAAAATGACAAGATCCAGGGGACAGCTGAGGCAGCGCTACAAAGTGGTGAAAGCCTTCCTCGAGCTAAACCCCAACGCCTCCATGGAGGAGGTGAGGAGGCGAAAGCACAGCTGGAGCGCGGAGCAGCAGGAGtttatgattttgagTGCTGTACAAATTGAAATCCTGTTGAACAGATTGTCTGAAGCTGAGAGACGATCTAAATTGCTCAAATTAGAAGTAAGAAGTATTCGACAGGAAATATCATCATTGCAGAATGGAATTGGAAGTGGACAGAATCAACAGAATTTCATCAATTTAACTAAAGAAAATGGAGTAAAGACAAGaagatCACTCATTCTGATTGATCCACTTCCGAGCACCTCTGCATCTGATACTGATGGTCCTGTTCATGTAGAATCTTCAAGCGTTACTTACATTGGAAGTTCTACTTCAGATGAACCAGGTGCTAGTAAAAAAATCAAAGCATCATTCAGCAAAGAAGGCGATCATGTAATTGTTTACACTGATGGAGCatgtgaaaataatggaaaagctAATGCCAAAGCTGGTATAGGAGTGTGGTTTGGGGATAACCATCCTTTaaatatttcaagGCCAGTTGAAGGGAAAGCAACCAATAATACAGCGGAGATTCAAGCCTGTATTCAAGCACTTCATGAATTGAGGCACCAAGGTGTACCAAAGGTGAAGTTAATAACTGATTCTCAATTTACCATAAATTGTATGACAAAGTGGATAAAAAACTGGAAACGGAACAACTGGAAGACTGCCTCTGGTGGTCCTGTCAAAAATAAAGAAGATCTGCAGAAGTTACACGAAATGATTCAAGTATTTTCAGATGTTCAATGGtgTCACGTAGCAGGACACGTAGGCATAAAAGGAAACGAGGAGGCTGACAAACTGGCAAAGGAGGGAGCACGGCTGTACCGACCCAGTTGA
- Protein Sequence
- MDDEADLNKMIEVLRNSKKEETDQFEYEGFINYDDSDVEECFDEDNAEDLEEIVARDDINTIDLSNLYKYNPISSLKPEEKQIIESCTDPDLKKILLLNRQKNMQLIQLYKKVKDTLIECKQNIVEKNEIIKHCAETNKGAKYSAGIWRLGAPYFKDRQLYGCPSNEDTLKKRRNRELSIYEISPSVKWANHECEMLTRAIKVNYNINQQNEVRRAIKEVTSRGGEKEELAELTARLDELDTNDNCEVPALKSDTNIDWSRVAEVFTKDKHSAFECRSVWHIHLHPAFNKGPWSSEEDEKLQKLVLRYNYQQWDKIAEELGSNRSCFAACNHYFSKLHSKFRRGEFDFAEDRKLLEVINKHRMGSFIPWVKVVKHFKNRTRAQLHHRYTYYLSQHHKKLGKFSDAEDVLIMICVDKFGRNFRKCTEYLPKRSLIQIKARYSSNLTNFVKKGTWSVEEDNMIMNHVEKKGASNWTELSQKMTRSRGQLRQRYKVVKAFLELNPNASMEEVRRRKHSWSAEQQEFMILSAVQIEILLNRLSEAERRSKLLKLEVRSIRQEISSLQNGIGSGQNQQNFINLTKENGVKTRRSLILIDPLPSTSASDTDGPVHVESSSVTYIGSSTSDEPGASKKIKASFSKEGDHVIVYTDGACENNGKANAKAGIGVWFGDNHPLNISRPVEGKATNNTAEIQACIQALHELRHQGVPKVKLITDSQFTINCMTKWIKNWKRNNWKTASGGPVKNKEDLQKLHEMIQVFSDVQWCHVAGHVGIKGNEEADKLAKEGARLYRPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -