Came001624.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chrysolina americana
Gene Symbol
ct
Assembly
GCA_958502065.1
Location
OY293410.1:25802474-25825045[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.4e-28 1.3e-23 84.7 0.0 2 72 304 375 303 380 0.95
2 3 3.2e-32 5.7e-28 98.7 0.0 3 77 714 789 712 791 0.96
3 3 2.3e-30 4.3e-26 92.7 0.0 3 75 924 997 922 1001 0.95

Sequence Information

Coding Sequence
ATGTCTCATCAAGATCGAATTAATCAACTATTGGAAGAAGTTCAGAGGCTTCAAGGATGTCTTACTAAACTGCAAGAATCATCCATGTCGCAAATCAACCGCTTAGAAGATCAAATAGAGCAAAAGAGGCAACACATACAAAGACTCGAAAGCAAATTAGAATTACAAAAAGACTACGAAGAAATAAAGAGGGAAATCAGtattttacgATCAGACTTGACGAATAATCCGGATGGAAGAAGTATCGAAATACTCTTAGAAAAATCAAAGAGTTTAACGTTGGATAATAGAGATACATCACCTTCGAGGGACAGAGAAgGGGTGGATCAACTTCAGTCGCAAACCCCTAACCTCTCAGACACCTCTCCAAACAATCTCCCTCCGCCCTTTCAAAACGTAGATGCATTCGGTAGTGTACTTGGCGAAGAACTAGTTTCTTCGTGGAGAAGAACTATTGAACACAATCGAATACCTCCAAAATCACCCTCTGCTTCTCTAGATGGGCCCCTCAAAAGTTCCACGCCGATAAACGCAGATTCGACGGCAGAAAAGAGCACGGCATCGACGCCTCAACCGTCTGATCAACTATGCCATCAGTCACCAGGTGAGAACTTGATGAACGGCAATCCGAAGAGTCCGCAGGAAGACAACAACAACCACCACGTCAGTAACAACAACATTCCGCTAAGCGCTATATGCGCAGTCAACAACTTCCTGAGGAACGACGACAGCTTGAAGAGCCCCTACAGATTCGAGGACCATCATCGATCACCTTTCAAGTTCGCCGAAGATTTGGGAATGGCTCCTGGCTCCATGGTGGGGAGATTGGGCGAGAGTCTGATACCGAAGGGTGATCCTATGGAAGCCAAACTCCAGGAGATGCTGAGGTACAACATGGACAAGTACGCATCGCAAAACTTAGATACTCTCCATATTGCGAGGAGGGTGAGAGAGCTGTTGTCTATCCACAATATTGGCCAAAGATTGTTCGCAAAGTACGTTTTGGGGCTGTCTCAGGGAACCGTTTCTGAACTACTATCGAAGCCGAAACCTTGGGATAAGTTGACGGAGAAAGGAAGGGACAGTTACCGGAAGATGCACGCCTGGGCTTGTGACGATAATGCCATCCTACTATTGAAGTCATTGATACCAAAGAAAGAccatttttcatcaacaggcaaATCAGAATCTGGCATGCCACCCTTCGGGAGACCAGAAAACGACCTAACAGACGACAGGCTGGTGCATATCTTGAACGAGGCGAATCACTTTCAACAAATCAAACACCAGCAACCTGAAGATAGCCACAGTAATGAAGACTCTAAATCTCCACACGGATGTAGCAGTCCATTTTCTCGAGACTCTTCTTTGAATAGGAGACTGAAAAAGTACGAAAATGACGATATATcccaagaaaaagttgtacggATTTATCAAGAAGAACTTGCCAAGCTTATGGGTAGAAGGATCGAAGACATGAGGAGCCGGGAAGGAAACTTTCCTGGTATTTTTCTCCCTCAACTATTTAGCGGGAATCCCATGGATCGCACCCAGGACGATATACGCATAGCCCTTGATGCATATCATCGTGAACTAGCAAAGCTCAATCAAGGACAGGGTCCCACACAAATGCCAATCAGCCTTCTTGCCATCCAACAACAAGCGTTAgcccatcatcatcatcagcagcagcagcaacagcagcaacatcaacaacaacagcaACACCATCACCACCTTCATCACAATCACAGCACTAACGGCGGCGTTCAAGACTTGTCAATTCCAAAAGACAAGCTGAAAATGATGAATGGAGTGATGGACGAAAAAGAAAAAGACGATGATGCAATGTCTCGTCATTCGGGATCTGCATTCAGTTTAGTGCGACCTAAAATAGAACCCGGGACACAACCGAATACTGGTTCCACCGCCTCAAGCCCTTTAGGTAACTCTATATTACCTCCAATGACCCCTACAGATGATTTCTCCGGTTCAGCGGCAGCATCACCCTTGCAAAGAATGGCAAGCATCACAAACTCCCTCATATCACAACCGCCAAGTCAACCTCATCACACTCCTAACAACCGACCTCTGAAAGCAGTATTACCTCCAATCACACAACAACAATTCGATCTCTATAATAATCTCAACACGGAAGATATCGTTAAGAAAGTCAAAGAACAACTAAGCCAGTattcaataagccaaagactTTTCGGAGAAAGCGTCTTGGGTTTGTCTCAAGGTTCAGTTAGCGATCTCCTAGCTAGGCCAAAGCCTTGGCATATGTTGACACAGAAAGGACGAGAACCATTCATACGAATGAAAATGTTCTTGGAAGATGATAACGCTGTTCACAAGTTGGTAGCCAGCCAGTACAAAATTGCACCGGAGAAACTCATGAGGACTGGGGGATATGGTGGAGctTGTACTTCCATAGGTAAACCAATGCCTCCTACACCCAAAATGCTGTCAGAAGCAGCAGGTCTTCTTAACAAAATGCAAGAATCTCAAAACATCTTACCTCCTTCACTTCAACTGGGACCACCTCCAATGTCGAATCCTCAGCCGCCTCCACCTCCAATGCTACTAACTCCTCCTGGAATACCTCCACATCATGCCATCAATCTCCAGAATCAAGATTTAATGAAGAAAGCCAACCACAGTCCTCATGGCATCTCACATTCACCCATGGGCCAACATCATGCTTCACTGAGAAGTCTTCACCAGCATATTTCCCCAAGCGTTTATGAAATGGCGGCGCTAACTCAggatttggacacccaaattATTACCACCAAAATCAAAGAGGCATTACTAGCTAACAACATTGGACAGAAGatatttggcGAAGCTGTTCTTGGGCTGTCCCAAGGTTCGGTTAGTGAACTCTTATCAAAACCAAAACCATGGCATATGCTCAGCATCAAGGGCAGGGAGCCCTTCATAAGAATGCAATTATGGTTAAACGACGCCCACAATATCGATAGATTGCAAGCTCTCAAGAACGAGAGGAGGGAAGCGAATAAGAGGCGAAGATCTTCCGGGGCGGGTGCACATGACAATAGTAGTGATACTTCTTCAAACGATACTTCAGAGTTTTACCACTCAAATTCACCTGGTCCTGGCCCTCCATCAGCCAAAAAACAGCGCGTGTTGTTCAGCGAAGAACAAAAGGAAGCTTTAAGGCTCGCATTTGCTCTAGACCCCTACCCCAATGTTGCTACAATTGAGTTTCTTGCGAGTGAGCTAGGACTTTCTTCTAGGACAATCACAAATTGGTTTCACAATCACAGAATGAGACTAAAGCAACAAGTACCACATGGTTTGTCCCCAGATGTTCCTCCCAGAGATCAAACCGGGGGTCAACAACCCTTTGACCCAGTACAATTTAGATTACTTTTAAACCAAAGACTACTCGAATTGTCGAAAGAAAGAATGGGCTTGAGCGGTGTTCCTCTACATTATCCACCTTACCTAGCTACGAATACCAACTTAGCCGCTCTCATAAGTCGAGGACTCTTGCCGACAGGTGACATGGACTTGGCAGCACTTAATCATGTTGTTAAAGAGCAAATGAGTGGATTGGACTTATCCATGCCTTCTCTGAAACATGAACCTGGTGATTATGATGACGATGATGATGTAGAAAGCAATGCGGGTTCAGAAGACTCAAATATTTCAGGAGGTAGTTTGCAAGGGGAACTGAAAGAGGAACCCAAAGAATTACCTACGAATCAAGGAAGATCGTCACGGCGAAAGCCTGCAGCGCCCCAATGGGTAAATCCCAACTGGGAagaagaaaaggaaaaatcaGCCACCGGTGACGAAGTTATCATTAATGGCGTCTGCGTCATGCAGACTGGTGATGACTATGGTCGTAGAAATGCCGAACAAACGGTTCGAGTCGAACCCCAAGCAGTGTTGGATCGATTTGAAGATGATCAAAGTGACACTTCTTCGATAAGCAACGAAAATGAGCAACATGAAAGAAGCGAAGACAAGTGTGATGATGAACATGAAGAACAAAATGAAGAAGGTGAAGCAAAAAATGAAGATAGTGAAAGTAAAGTGGGTAAACATGAAAATGAAGATGAGAGGTGGGAGTACTAA
Protein Sequence
MSHQDRINQLLEEVQRLQGCLTKLQESSMSQINRLEDQIEQKRQHIQRLESKLELQKDYEEIKREISILRSDLTNNPDGRSIEILLEKSKSLTLDNRDTSPSRDREGVDQLQSQTPNLSDTSPNNLPPPFQNVDAFGSVLGEELVSSWRRTIEHNRIPPKSPSASLDGPLKSSTPINADSTAEKSTASTPQPSDQLCHQSPGENLMNGNPKSPQEDNNNHHVSNNNIPLSAICAVNNFLRNDDSLKSPYRFEDHHRSPFKFAEDLGMAPGSMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAILLLKSLIPKKDHFSSTGKSESGMPPFGRPENDLTDDRLVHILNEANHFQQIKHQQPEDSHSNEDSKSPHGCSSPFSRDSSLNRRLKKYENDDISQEKVVRIYQEELAKLMGRRIEDMRSREGNFPGIFLPQLFSGNPMDRTQDDIRIALDAYHRELAKLNQGQGPTQMPISLLAIQQQALAHHHHQQQQQQQQHQQQQQHHHHLHHNHSTNGGVQDLSIPKDKLKMMNGVMDEKEKDDDAMSRHSGSAFSLVRPKIEPGTQPNTGSTASSPLGNSILPPMTPTDDFSGSAAASPLQRMASITNSLISQPPSQPHHTPNNRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACTSIGKPMPPTPKMLSEAAGLLNKMQESQNILPPSLQLGPPPMSNPQPPPPPMLLTPPGIPPHHAINLQNQDLMKKANHSPHGISHSPMGQHHASLRSLHQHISPSVYEMAALTQDLDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGLSPDVPPRDQTGGQQPFDPVQFRLLLNQRLLELSKERMGLSGVPLHYPPYLATNTNLAALISRGLLPTGDMDLAALNHVVKEQMSGLDLSMPSLKHEPGDYDDDDDVESNAGSEDSNISGGSLQGELKEEPKELPTNQGRSSRRKPAAPQWVNPNWEEEKEKSATGDEVIINGVCVMQTGDDYGRRNAEQTVRVEPQAVLDRFEDDQSDTSSISNENEQHERSEDKCDDEHEEQNEEGEAKNEDSESKVGKHENEDERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01368896;
90% Identity
iTF_00327747; iTF_00755343; iTF_00755238;
80% Identity
iTF_00327747;