Basic Information

Insect: Chrysodeixis includens
Gene Symbol: -
Assembly: GCA_941860345.1
Location: OW796116.1:8687049-8703121[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.047 3.6 8.5 0.2 1 23 107 129 107 129 0.96

2 11 5.9e-05 0.0045 17.7 0.1 1 23 145 167 145 167 0.98

3 11 0.0044 0.34 11.8 4.5 1 23 173 195 173 195 0.98

4 11 5.7e-06 0.00044 20.9 2.4 1 23 202 224 202 224 0.99

5 11 1.1e-06 8.5e-05 23.1 0.4 1 23 230 252 230 252 0.93

6 11 4.3e-07 3.3e-05 24.4 0.2 1 23 258 280 258 280 0.98

7 11 2.4e-06 0.00019 22.0 1.9 1 23 286 309 286 309 0.96

8 11 1.5e-05 0.0012 19.5 1.1 1 23 315 338 315 338 0.95

9 11 0.00026 0.02 15.6 4.0 2 23 345 366 344 366 0.97

10 11 5.3e-06 0.00041 21.0 1.0 1 23 372 394 372 394 0.97

11 11 0.014 1.1 10.2 0.1 1 23 400 424 400 424 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.047	3.6	8.5	0.2	1	23	107	129	107	129	0.96
2	11	5.9e-05	0.0045	17.7	0.1	1	23	145	167	145	167	0.98
3	11	0.0044	0.34	11.8	4.5	1	23	173	195	173	195	0.98
4	11	5.7e-06	0.00044	20.9	2.4	1	23	202	224	202	224	0.99
5	11	1.1e-06	8.5e-05	23.1	0.4	1	23	230	252	230	252	0.93
6	11	4.3e-07	3.3e-05	24.4	0.2	1	23	258	280	258	280	0.98
7	11	2.4e-06	0.00019	22.0	1.9	1	23	286	309	286	309	0.96
8	11	1.5e-05	0.0012	19.5	1.1	1	23	315	338	315	338	0.95
9	11	0.00026	0.02	15.6	4.0	2	23	345	366	344	366	0.97
10	11	5.3e-06	0.00041	21.0	1.0	1	23	372	394	372	394	0.97
11	11	0.014	1.1	10.2	0.1	1	23	400	424	400	424	0.93

Sequence Information

Coding Sequence: atgcgccgggattactATTCAAACGATGAATCCCAGATAGAGTTACAAGTGTCGGGAGATGAGGAAACTGCGAACGCCATCATTGCTGCGGCACAGGAACAAGGCGGTGCGTTCATCAAAGTAGAGTCGGGCGAGATGTTCCGCGTGCAGTCGGTGAGTAGCGCGGTGACGTCACGCCGGCCGCCGCTGCAGATCGTGCAGCGGCAAGGGGACAGCTTCCACTGCCTGCTGTGCGGGAACCACGACGCAAGTTCCCCAACAGTGGGCGACGCGGAAACCATGATGCGTCACTTGAAGTCCGTCCACGACGCACGCATCTACATCTGTCAGTTCTGTGGACAGATCATGAGGAAACGGACGGATTATACCGCACATATCGCGGAACACGCCCAAAAACTAAAGCCGTCGCAATCCCCGGCCAAAGCGGCCCCGTACCGTTGCGTAACGTGCGGCAAGGCTTACAGCAGCCGCACGCTACTGGCAGAGCATGCCAACGTGCACTCGGGGGCGCGGCCCTACGCCTGCCACCTCTGCAGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTCAAGACACACGCGGTACGTCCCCGCCCATACAAATGCACGCAATGCGGCAAGTCGTTCCTCACACAACAGAATCTGAACCAACACGAGAAAACTCACTCCGGGATCAAAGACTTTGTCTGTAATATATGCAACAAAGCATTCAGTACGCAACATAACTTGGAAGTACACGGTGTGGTCCATTCTGGGAACAAGGCGTTCTCGTGCACGGCGTGTGGAAAGGCCTTTGCAAGGAGAGCTGAGTTACGAGACCATATGAGGATACATACAGGCGAGCGTCCGTTCTCGTGCGAGATCTGCGGCGCGCGCTTCACGCAGCGCTCGAACCTGCACTCGCACCGCCGCGCCACGCACATGGACGACAAGCGCTACGCCTGCACGCAGTGCCCCAAGCGGTTCAAGCGCAGGCGACTACTAGAATACCACATAAAGGCATCACACACCGGCGAAAGGCCGCTGAAGTGCGAGTTCTGTCACTCGTCGTTCGTGTACCCCGAGCATTACAAGAAACACATACGCATACACAGCGGGGAAAGGCCTTATGTTTGTGAGATCTGCGGCAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACTCGGACAAGAAGCCCTACGAGTGCGTGGCCTGTGGCGCCGGCTACATGCGCAAGCAACTGCTCTACGCGCATATGAACACCAGTGGTCATTTAGCTGAGTCTATAGTAGTCAATCAACCAAGAGTTATAAAGGTATCAGAaaatAGTGTAACACAGCCTGAAGTTCAGTATGTGGAAGCGAAACCTACTAGCAAATTTGATGCGATATTTGAAGCAAGTGAACTGGAAAATAGTGTTAAATCTGTTGTTAAATCAGAAACTGAAACGGCTATAGAAGGAACAAAACTTTACATCACAGAAGATAAAAAGATTATTTTACAAGATGAGAAAACGACATTGAATCTAATACAAGACAGTGAGGATCCCACGTTATTGACAATACATAACATAGATCGTGCAGACGGCACGATTCTAGAAGCGGTTGATGCTGATCAGCTAGGAGACCAGACAGAGATCGTAGCCAACGACGAGAACGGCGGCATGGTGCGGCTCATACAGATCAAGCTCCCCGACGGGAACAACGGCTGGGTCGCGCTCAACCGATGA
Protein Sequence: MRRDYYSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFRVQSVSSAVTSRRPPLQIVQRQGDSFHCLLCGNHDASSPTVGDAETMMRHLKSVHDARIYICQFCGQIMRKRTDYTAHIAEHAQKLKPSQSPAKAAPYRCVTCGKAYSSRTLLAEHANVHSGARPYACHLCRKAFASKYTHQAHLKTHAVRPRPYKCTQCGKSFLTQQNLNQHEKTHSGIKDFVCNICNKAFSTQHNLEVHGVVHSGNKAFSCTACGKAFARRAELRDHMRIHTGERPFSCEICGARFTQRSNLHSHRRATHMDDKRYACTQCPKRFKRRRLLEYHIKASHTGERPLKCEFCHSSFVYPEHYKKHIRIHSGERPYVCEICGKSFNSRDNRNTHRFVHSDKKPYECVACGAGYMRKQLLYAHMNTSGHLAESIVVNQPRVIKVSENSVTQPEVQYVEAKPTSKFDAIFEASELENSVKSVVKSETETAIEGTKLYITEDKKIILQDEKTTLNLIQDSEDPTLLTIHNIDRADGTILEAVDADQLGDQTEIVANDENGGMVRLIQIKLPDGNNGWVALNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -