Cinc018385.2
Basic Information
- Insect
- Chrysodeixis includens
- Gene Symbol
- SMARCC2
- Assembly
- GCA_941860345.1
- Location
- OW796113.1:4946479-4959687[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-15 4.8e-12 46.1 0.1 3 44 528 569 526 571 0.95
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACATGAAACCGGGCGGGTCCCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCCTCTCGCAAGGACCTGAACGTGCAGATGATGATGGAGATAGAGTCCTCGTTGCTCGGCGCGGAGGTCATCCGCTCGCCGTGCGTGTTCATACGACCCGATGTCGACAAGGCCACCGCTAACAAAGTCAAAGATATCGTGGTCAATCATCAGGGAGAGATTTGCGAGGACGAAGAGGAGGCGACACACATAATCTACCCGACGGTAGACCCGTTGGAGGAGGAGTACGCGCGGCCGGTGTTCCGACGCAGCAACCACGTGCTGGTGCACTGGTACTACCTGCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCCGTGGAGGTACCAGAGACGGTGAGCTGGGACTGCAACCGCTCGGAGCCGTGGCGCGTGTCGGCGTCGTGGGCGCTGGACCTGCCGCAGTACAACGAGTGGATGAACGAAGAGGACTATGAAGTCGACTCTAACGGCAAGAAGAAGATTCACAAGTTACGACTATCCGTGGACGACCTGATCCCCGGCGCGGAGCCGTCGAGCAAGTCTAAGAAGGGCAGCAAGAGGAAGAGATCGCCTTCGCCGCCGCCGCAGAAACACGGCAAGAGGAAGAGTCGAATCACAAAGCGGCGAGAGAATGATGTCGACGAGGAGGAAGACAACGCGTCTCGTGACAACACCGACGCCGCGCCCACGCCTGAGAACGAACGATCGGCTGACACGGCGTCAGGTCCATCAGCGGGGGTAACAGCATCAGGCGCGGGCGAGGCCAGTGCGGACGCGCCGCCCACGCCCGCGCCGCCGCTCGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACACAGGAGATGCTTACTAAGGAAGAGTTGGAAGACAACGTGACGGACCAGACGCATCACATCGTGGTGCCGTCCTACTCGGCCTGGTTCGACTACAACTCCATTCATACTATCGAGAAACGAGCACTGCCAGAGTTCTTCAATGGAAAGAACAAGTCCAAGACGCCCGAGATATATTTGGCTTATAGGAACTTCATGATCGACACATATCGTCTGAACCCGACTGAGTACCTAACCAGCACGGCGTGCCGCCGCAACCTCGCGGGCGACGTGTGTGCTATCATGCGCGTGCACGGCTTTCTCGAGCAGTGGGGACTCATCAACTACCAGCTAGAAACCGAATCCCGTCCGACGGCGATGGGTCCTCCCCCAACGTCTCACTTCCACGTGCTCTCCGACACGCCGTCGGGCTTGCAGCCGCTCGTCACCCGCCCCACACAACCCAGGCCTGCGGAGAATGTGCCGAAGGTGGAGCCCGGCCTGCCGAACGGTGCGGAGGCCGGCGCGGGCGCTGCGCCCCCCGTCTTACCCGTCAAACCAGAGCCTGCGCTCGACATCATCGCCTCGCCAGGACTCAAGCTTGACCAGTACCGGCTGGGCGGCGGCGCGCTGGGCGGGGCGGGCGCGCGCGGGCGCGAGTGGACGGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCCGCGCACGTCGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTATCTGCACGACCCGCACTCCGGTGGTGTATTAGGTCCACTAGCATACCAACCTATTCCGTTCAGCAAGACCGGCAACCCCGTCATGAGCACAGTGGCCTTCCTCGCGTCGGTGGTGGATCCGCGCATCGCGTCCAAAGCCACCAGGGCGGCCATGGAGGAGTTTGCGGCAATCAAGGACGAGGTTCCCGCAGCGATGATGGAGGCGCACGTGAAGGCGGCGGGCGCGCACGGGCCGGGCGCCGCGCTGGCCGCCACCGGCATCGCCGGCACCGCGCCCGACCTCTCGCCGCAAGGCGAGGGAAAGAAGGAGGGCTCATCAGATATCAAGGCTGAGCCTATGGAGGTGGAAGAGGGCGAGGCCAAGGTCAAGGACGAGCCGGCGGAGACGCCCGCGCCCACGGAACCTGAGAAGGAGCCTAAGGAGGAACCCTCGCCACAGCCAGCAGAGAAAACCGAAGCCCCAACGACAGTAGACGCGAAGCTGCAATCTGCGGCGGCGGCTGCGTTGGCTGCGGCCGCGGTGAAGGCCAAGCATCTCGCCGGCGTGGAGGAGCGCAAGATCAAGTCGCTGGTGGCTCTGCTGGTCGAGACACAGATGAAGAAGCTGGAGATCAAGCTGCGGCACTTCGAGGAACTAGAGGCTACCATGGAGAGGGAGCGAGAAGGTTTGGAGTACCAACGGCAGCAGTTGATCCAGGAGCGGCAACAGTTCCACCTAGAGCAGTTGAAGGCGGCCGAGTTCCGCGCCAGGCATCAGGCGCATCAGAGGTTACAAGCTGAAAGCGGCGGTGTAGGCGCAGGAGTAGCGAGTGCGGGTGTGGCGGGCGCGGCCCCGGGCGGCGCGCCCCCGCCCGCGCTGGCCGCCGCGCCCCCCGACCCCGCGCCCGACGCGCCCCCCGCACACGCTTAA
- Protein Sequence
- MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAEVIRSPCVFIRPDVDKATANKVKDIVVNHQGEICEDEEEATHIIYPTVDPLEEEYARPVFRRSNHVLVHWYYLPDSHDTWAQADLPVEVPETVSWDCNRSEPWRVSASWALDLPQYNEWMNEEDYEVDSNGKKKIHKLRLSVDDLIPGAEPSSKSKKGSKRKRSPSPPPQKHGKRKSRITKRRENDVDEEEDNASRDNTDAAPTPENERSADTASGPSAGVTASGAGEASADAPPTPAPPLDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLETESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAGAAPPVLPVKPEPALDIIASPGLKLDQYRLGGGALGGAGARGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDPHSGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPGAALAATGIAGTAPDLSPQGEGKKEGSSDIKAEPMEVEEGEAKVKDEPAETPAPTEPEKEPKEEPSPQPAEKTEAPTTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGGVGAGVASAGVAGAAPGGAPPPALAAAPPDPAPDAPPAHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00040769;
- 90% Identity
- iTF_01487657;
- 80% Identity
- -