Basic Information

Transcription Factor Domain

TF Family: COE
Domain: COE domain
PFAM: AnimalTFDB
TF Group: Helix-turn-helix
Description: This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0087 32 2.9 0.0 142 164 5 27 2 36 0.88

2 5 0.0037 14 4.2 0.0 139 164 74 99 60 108 0.84

3 5 0.0037 14 4.1 0.0 139 164 146 171 132 179 0.84

4 5 0.0037 14 4.2 0.0 139 164 218 243 204 252 0.84

5 5 0.016 60 2.0 0.0 145 164 274 293 269 303 0.88

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0087	32	2.9	142	164	5	27	2	36	0.88
2	5	0.0037	14	4.2	139	164	74	99	60	108	0.84
3	5	0.0037	14	4.1	139	164	146	171	132	179	0.84
4	5	0.0037	14	4.2	139	164	218	243	204	252	0.84
5	5	0.016	60	2.0	145	164	274	293	269	303	0.88

Coding Sequence: ATGCCTGGCACTGGTGAGGTCCCGGCCATGGCGCGCCTGCACCTGACCCGCGAGAGGCTCGTGTCGCGCGCCTGCGACGAGGACGTGCTGCTGTCGCAGGTCGCCGAGGTGCAGGAGAACACGCAGCTCGACAACAGGCGTGAGTACCTACATGCCTGGCACTGGTCGCCGAGGTGCAGGAGAACACGCAGCTCGACAACAGGCGTGAGTACCTACATGCCTGGCACTGGTGAGGTCCCGGCCATGGCGCGCCTGCACCTGACCCGCGAGAGGCTCGTGTCGCGCGCCTGCGACGAGGACGTGCTGCTGTCGCAGGTCGCCGAGGTGCAGGAGAACACGCAGCTCGACAACAGGCGTGAGTACCTACATGCCTGGCACTGGTCGCCGAGGTGCAGGAGAACACGCAGCTCGACAACAGGCGTGAGTACCTACATGCCTGGCACTGGTGAGGTCCCGGCCATGGCGCGCCTGCACCTGACCCGCGAGAGGCTCGTGTCGCGCGCCTGCGACGAGGACGTGCTGCTGTCGCAGGTCGCCGAGGTGCAGGAGAACACGCAGTTCGACAACAGGCGTGAGTACCTACATGCCTGGCACTGGTCGCCGAGGTGCAGGAGAACACGCAGCTCGACAACAGGCGTGAGTACCTACATGCCTGGCACTGGTGAGGTCCCGGCCATGGCGCGCCTGCACCTGACCCGCGAGAGGCTCGTGTCGCGCGCCTGCGACGAGGACGTGCTGCTGTCGCAGGTCGCCGAGGTGCAGGAGAACACGCAGCTCGACAACAGGCGTGAGTACCTACATGCCTGGTACTGCGGAGGTCCGGCCATGGCGCGCCTGCACCTGACCCGCGAGAGGCTCGTGTCGCGCGCCTGCGACGAGGGACGTGCTGCTGTCGCAGGTCGCCGAGGTGCAGGAGAACACGCAGCTCGACAACAGGCGTGA
Protein Sequence: MPGTGEVPAMARLHLTRERLVSRACDEDVLLSQVAEVQENTQLDNRREYLHAWHWSPRCRRTRSSTTGVSTYMPGTGEVPAMARLHLTRERLVSRACDEDVLLSQVAEVQENTQLDNRREYLHAWHWSPRCRRTRSSTTGVSTYMPGTGEVPAMARLHLTRERLVSRACDEDVLLSQVAEVQENTQFDNRREYLHAWHWSPRCRRTRSSTTGVSTYMPGTGEVPAMARLHLTRERLVSRACDEDVLLSQVAEVQENTQLDNRREYLHAWYCGGPAMARLHLTRERLVSRACDEGRAAVAGRRGAGEHAARQQA

Sequence clustering based on sequence similarity using MMseqs2