Cinc000308.1
Basic Information
- Insect
- Chrysodeixis includens
- Gene Symbol
- jarid2b
- Assembly
- GCA_941860345.1
- Location
- OW796090.1:140424-157563[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9 8.8e+03 -2.5 0.1 46 77 334 369 289 372 0.56 2 2 7e-20 1e-16 61.4 0.1 6 88 1743 1822 1739 1823 0.92
Sequence Information
- Coding Sequence
- ATGGGGCTAGAGGGGCCGGCCCTATGTGCATTGTATGTACATAATAGGGAGACGGGGGACCGAGGGGTGAGCCCCACCCTGCCTACCCACGCTACCCCTGCCCCCCGCACCTCATGCGCCGGCTATAAAGCGTGGCCCCGCACCGCGGCAGCTCAGTTTCTCCTCCGCCGCGATACCGAATGGTCGTTAGCAAATGGCCTGGCCTCTCCTGGCCAACCCCGTTCGCGTCGCTTGCGAGCCCAGCGGAAGTTTCCCCAGAACGCCGCCCCTCCGCCAAGCGCTGCGCCTGCGCCGCCTGCTCCACCTGCGAACGGCGACCGCCGAGACAACAACCCCGAGGAGCGCGGAAACTACATCATCCAACACCAAGTGGGACCCAGCGAGTTCGTCGATTATATATCCCACCAAGCATTAGATTCACACCATCACCAAGATTTTCAGCCACGTGTTCTCTTAAGAAGGCTACGAGTTCCCTCAAGCACAAATGCAAATACAAGTACAACTACACGAACTAGGACAAGGAGAGCGGAGCTTGCTAGAAACCGAGAGCTTGCCAGAAGTAGAGTAACAGACAAAAATAAAGAACAAGATGACAAGTGCGCAGAAACTAGCAAGAATAAAGAAACAAAAAGCACGGAAACTGCCACAAACAAGGATGCCAGTAAAAATAAGGATGGCCATAAAAGTAAAGCAGTTACTTTTAGCAAAGACATTGCTAAGAACACGAGTAATGCCAAGAGCAACCATGCTAATAAAGAGACGGCTAAAAGCAAAGAATTAGTCTCTGATAAAGAAGTTAAAAAGAAAGATGCAGCAAAAAATAAGTCAAGTGACAAAAAACAAGAGAATGTTAAAAATAAGAAAAGTAATTTACATCAAGAGAAATCAAATACAGACAATCCACCGTTATCACAGAAACACAAGCCGACCAAACCAGTGCATGTTATGTCGCTGCGGTCAAGGCGACAAAGCAAGCATGAGTTCAAAAAGAAAAAAGCGACGAAACGTGTTACTACTAGACTTGCGACCGCCAAACGTAACATTGCCAGAGCCCTAGAGGTGTCCACCAAATCCGAAAAGAAGATGCAAGATGCATCTAAATCTACAAGGCGTCACACTCCCAAACCGTCTTCAGAATTCTCTCTCGACGATAACAGACCTTTGACTTACTTCAAGAACAGCACGCCGAAACGCGCGCCGACTGCCACCGTGCCTCGCGTCTCATTAGTGCCTCTTTCTGCTGCTACAACAGAACCAGTACCTGGCCCCAGCGGAATAAATAAGAAGAAAACTAATGCGCGAAATCAAAAAACTAAAGATAATTTAGATTCATCATTAGCCAATATTACGACAGAACCATTGCCTAGTGTGGTAACAGATACTGTATCAGATAGTAATGTGGCTAGGCCTTTCTACAGTGAACCTAATATTTATCGTTGGATGAACAGCTCTTTAGACGATGAACAAAGTGCAACAACGAGTAAAAGCAATTTAGCTCCTTGGGTTTCCGCGGAAACACAATGCCCTGCGCTGCAGTGGCGTACCATCAAGGACCTAAATAACGCCGAAAAACCTGAGCTAGAGGCCCGTTGCTGCAAGTGTGAAGCCTGTAACCGAATAACGAAACTTATGAGGATCTCCGAAAACCTAAAATCTCATATGTTTCTTGTATCGGGCGAAGGTGATAACACTCCTGAAGCAAATAAACATGATGATAATATATCGAGTGTATCAACAGACACTACCATTTATTTAGAGACTATACCGAAAACGCCATCGTCTGTTATGAAGATACAAGCACATAAAATTCATGGGAAGAAACTGCTATCATCTTGTGTGATATCAAGGACGCAAGCAAGGCAGACGACAGACATATCGTTATTAGAGCTTGAGATGCTGCTTGACCAACTAAATGAAACTTTATCCGCAAGTTCACAAGCTGGTGAAAGCGCCGGGGGAGTGGTCATGGAATCCTCGTATGAAACAGATAGTTCAACTAGCGATCCTCTCCTACAACCCCGCCCCACTTTTAATACAAAACGCCTACGCCGCCAGTCAGTGTGCCCGGATCAGGCCACGGAAGGGCGACTGACACGACAAAGGCGCAACTCAAAGGGCGCGCAACTTGCCTTGGAAAATAAAGCGAAACGACTACGGCACATCTCAGAAAAGGCTAGTGAAGAACATATGACAAGACGTCGACGAGAGTCAGTGTGGGTTGAACAAACGAAAGAGGACAGGCCGAAGAGACAACGTCGTTTGTCACAGCGATCTGAACCGGCTTTACAAGATAAACCGAGACGCCAAAGGCGCGCCACAGTCTGTGCAGAAAAGACCACTGAGGAGCAACCGGAAGTACAACGACTTTCCTCGGAGTGCGCTGAAGTGGCCACGGAGGGGCGGCCAACGAGACAACGGCGCAGCTCACAGGGCGCACAACCAGCCTTGCAAATAAAAACTAGACGACAACGGCGCTTTTCTGAAAAAGTCACTGAAGAGCATGTGAAAAGACCTCGACAAGAGCCAGTTCCAGTTGAACAAGAGCCAGTTCCAGTTGAACAAGAGCCAGTTCCAGTTGAACAAATAACAGAAAACCGGCCGAAAAGACAACGTCGACTGTCACAACGCGCTGAACTGGCCTTACAAGATAACCCGAAACGCAAACGGCGAGTCTCGGTCTGCGCTGAAAAACTGAAGCCGAAGAGTGCTGATTCAGTAGACCTAGCCTTGCAAGACAAATCGAGACTAGCCGCGGAAAAGCCGAAAAGACGACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGGAGGAGCACCCGAAAAGACAACGACGCGATTCTGTATGCGCAGCCCTAGCCTTGCAAGATAACCCAAGACTAGCCACGCCTGAACAACCGACACGACAGGAGCCTGACTCAGGGAGTCCTGCACTTAATCTTCAACAACAACGGTTACGACGAAGACGCGCCTCAATATGGGCCGCACTGATCGATCCGGACGCAGCGACAGAACAAGATCGTGACTCAGTGAGCCCTGCTCAAGAGCAACCGAGGCAACAAAGACGTGACTCTACGGGCGCTGAATTGGAGGAACCGACACTTCGGGATCGCGACTCATTGAGCCCTGTGCTGGACGTTCCAGAACAAACGACACGACGAAGACGCCAGTCGGTGTGCTCGGTATTAGGACTCCAGGAGCAACCGGCACTACAATCGCTCGACACCGTTTACTCCGAACTGACTCGTCAGGAACGGCCTACGGAACCTTTACCCAACACCGATTTCGATGATCTGGCCCTCCAGGAACAGCCTACAGAACCTTTGCTCGACACCGACTTCGATGATCTGGCCCTTCAGGAACCGCCATCAGAACAACCGCTGGACACCATACACGGTAACCTGACTCAGCAGGCCCATCATCAACAGTCAACACAAAATACGCTTGACTACGTGCAGGCTTTACTGGTCCATCATCAACAGTCGACACAACAGTCGACACAACAAACAACCAGCCACGAGAGCCCTCGACTGACTAGTGAGGATCAAGATGACAGTCAGACGGCTATGTTGCTTGAATCATTTCGAAGCCGCGGAATGTTATGTGATGATGAGCCTAGTGTATCTGCTAAGAGTGTTCCAACAACGGCAAAGGCAGCACAAACTAGTTTTAAAAATATATCGTCCCAGCAACAAAGAGAGCAAACATTACATAATCAACGAACACGAGCACTTAGTGTTTGTCGACCCAGGGAAGATGTAGAGAGCCCTAGCTCGTCGCGGTCTAGCTTCGAATTAGTTTATGACGCCTCACCTGTGGTTACACCTGCCTTAATGAATCCTGCCGAGTCTACACCTGACGAGACTACCGCCGCAGACGTTACCCCTGCCGAGACTACCTCTGCCGAGACTACCTCTGCCGGGACTACCCCTGCTGAGACCGCTCCTGCCGAGACTACATCTGCCGAGGATGAAGCCCGCATGATGGCAGAAGTCGATGCACAAGCAAAAGCTCTGGAAACAGAGCGTGACGCCAAAGGTGACGACTCCCAAGACCAAGATATGGGTCACTCGTCATCGAGTGACCCTAAGCCGAGCTGCTTTCCCAGCAGTGCTGACAGCGCACGAATCTTAGAAGCCCCCGTATTTCGACCCACTAAAGATGAATTTGATGAGCCAATAAAGTATTTCGATAAGGTACTTTTTATTGCCATCAAGTATGGCATATGCAAAGTACTACCACCAGACGGGTGGCAACCGAAATGTAAGATCAATGAAGAGATTCGCTTCGACGTCAGTAATCAGTATATATCCCGGCTGTACAGTCGCTGGGGTCCAGCATCGAGAGAGTTGAGCGCTCTCAAACTGTGCCTGCAGCTACAAAACGTGAATGTTACACGCCCACCGTTGGTTGACGGAGTTGAAGTTAACCTCCCAAAGTTGTACCATCTTGTGCAACGGTACGGCGGTCTCGAAAATGTGATAAACAAGAAGCGTTGGGGCAAAGTCGCTGAAGAAATGAGGTTCAATAAGGGACCAGTGATAGAAAGGAAACTCGATCAGATATACGTTAAATATCTACTGCCCTACGCGACGCTTGATCATCACGAAAGGCAAGAAATAATGAAGAAAGTAGAAGTGGCTTGGTCTCGCAAGAACCAGAAATTACACGATAGAGCTTTGAACCCGTTGCACCGTCAGAAGCAAATGCTCGGCGAGTGCGACTCTTCGGACGGTGAGACGGAGGATGAACGCACTGCTGACGCCCTCGCCGACGCCGAAGACTGCGTCGTGTCTGGGCAGTGCATGAACTTCGCCAAGTTTAAGAAGGTTGCTACGAACGCTTACGAGACCTACATTGGCGTGGAAAAACCCGGCGCTCCGTCACCGTCTGCCTCATCAGTGGAAGACCAGTATTGGCGTATAGTGGTCCAGGGCACTGAACATCTGTGCGTGAACTCAGCGGCCATTGACACGGGCGAGGAAGGACACGGCTTTACCAAAAACAAAAATGAAGCCTATGGACGGCATCCTTGGAATCTTAAAAACTTCAGCTCAAACCCCCATAATCTGCTGCGGTATTTGGGCCCAAGGCTGGGCGTCACAGTTCCGACGCTTCACTTGGGCATGATATTCTCGACTAGTTGCTGGCATAAAGACCCACACATGTTACCCTGGACCGAGTACTTGCATTCAGGGAAAAGCAGAATTTGGTACGGAATACCGGACGGTCAGTCCGACAACTTCCGGAAAGCTGTTGAGACGCTCGCACCGACGTCTTGCCAGAACAAATCGCTCTGGTTACCATCTGACATAGCGATGATCCCGCCCAACCTGCTGCGCGATCATAACGTGTCGCTGGCTCGCACCGTGCAGGAGCCCGGAGAGTTCGTCATAGTCTTCCCGAAGGCCTACTCGTGCTCTATTAGCACTGGGTACGCCGAATCGGAAAGTGTCTACTTCGCGTCCCGCTCGTGGGTTCAAAACCTCTCGCAAGTCCTAAAGGAGACCCGCGAGAGCTGTGAGCCCACGATGTTCTCAATAGAAGAACTCCTCGTCCGGATCTGTGCGGACCCAGAAACTGACATTGAATTACTCAAACTTGTCAAAAAGGATTTAGAAAGCGTTATCACTGAAGAACTCTACTATCGTGACCAACTTTATCATAGGGGATTGGAGTATATAAAAGAGTTTGGTCCTGTACCATCGACTTCGAAAGGCAGAGGCAAGCGCCACGTTCCCGTAAACAACGATCGTGAGCTGGACGAGTGTGACTACTGCAGAGCCAAGCTCTACTTCTCTAAGTTATGCGGCATTACCGGGAGGGATTCCCAAGTGTGTTTAGAGCACGCTTGCATGCTCCTCGAGTCGAACAAATATAAGAACACGCCGCTGGAGCAACTTCAACTGAAGATCCTAGTGGATCCCCACGTGCTGCACGCCGCGCTCTTTAACTGCCAGAGCCGCGTCAGGAACTCGGCGGAGAGTTCGCCTGAAGGAGCGGGCGAGCCATGA
- Protein Sequence
- MGLEGPALCALYVHNRETGDRGVSPTLPTHATPAPRTSCAGYKAWPRTAAAQFLLRRDTEWSLANGLASPGQPRSRRLRAQRKFPQNAAPPPSAAPAPPAPPANGDRRDNNPEERGNYIIQHQVGPSEFVDYISHQALDSHHHQDFQPRVLLRRLRVPSSTNANTSTTTRTRTRRAELARNRELARSRVTDKNKEQDDKCAETSKNKETKSTETATNKDASKNKDGHKSKAVTFSKDIAKNTSNAKSNHANKETAKSKELVSDKEVKKKDAAKNKSSDKKQENVKNKKSNLHQEKSNTDNPPLSQKHKPTKPVHVMSLRSRRQSKHEFKKKKATKRVTTRLATAKRNIARALEVSTKSEKKMQDASKSTRRHTPKPSSEFSLDDNRPLTYFKNSTPKRAPTATVPRVSLVPLSAATTEPVPGPSGINKKKTNARNQKTKDNLDSSLANITTEPLPSVVTDTVSDSNVARPFYSEPNIYRWMNSSLDDEQSATTSKSNLAPWVSAETQCPALQWRTIKDLNNAEKPELEARCCKCEACNRITKLMRISENLKSHMFLVSGEGDNTPEANKHDDNISSVSTDTTIYLETIPKTPSSVMKIQAHKIHGKKLLSSCVISRTQARQTTDISLLELEMLLDQLNETLSASSQAGESAGGVVMESSYETDSSTSDPLLQPRPTFNTKRLRRQSVCPDQATEGRLTRQRRNSKGAQLALENKAKRLRHISEKASEEHMTRRRRESVWVEQTKEDRPKRQRRLSQRSEPALQDKPRRQRRATVCAEKTTEEQPEVQRLSSECAEVATEGRPTRQRRSSQGAQPALQIKTRRQRRFSEKVTEEHVKRPRQEPVPVEQEPVPVEQEPVPVEQITENRPKRQRRLSQRAELALQDNPKRKRRVSVCAEKLKPKSADSVDLALQDKSRLAAEKPKRRRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATEEHPKRQRRDSVCAALALQDNPRLATPEQPTRQEPDSGSPALNLQQQRLRRRRASIWAALIDPDAATEQDRDSVSPAQEQPRQQRRDSTGAELEEPTLRDRDSLSPVLDVPEQTTRRRRQSVCSVLGLQEQPALQSLDTVYSELTRQERPTEPLPNTDFDDLALQEQPTEPLLDTDFDDLALQEPPSEQPLDTIHGNLTQQAHHQQSTQNTLDYVQALLVHHQQSTQQSTQQTTSHESPRLTSEDQDDSQTAMLLESFRSRGMLCDDEPSVSAKSVPTTAKAAQTSFKNISSQQQREQTLHNQRTRALSVCRPREDVESPSSSRSSFELVYDASPVVTPALMNPAESTPDETTAADVTPAETTSAETTSAGTTPAETAPAETTSAEDEARMMAEVDAQAKALETERDAKGDDSQDQDMGHSSSSDPKPSCFPSSADSARILEAPVFRPTKDEFDEPIKYFDKVLFIAIKYGICKVLPPDGWQPKCKINEEIRFDVSNQYISRLYSRWGPASRELSALKLCLQLQNVNVTRPPLVDGVEVNLPKLYHLVQRYGGLENVINKKRWGKVAEEMRFNKGPVIERKLDQIYVKYLLPYATLDHHERQEIMKKVEVAWSRKNQKLHDRALNPLHRQKQMLGECDSSDGETEDERTADALADAEDCVVSGQCMNFAKFKKVATNAYETYIGVEKPGAPSPSASSVEDQYWRIVVQGTEHLCVNSAAIDTGEEGHGFTKNKNEAYGRHPWNLKNFSSNPHNLLRYLGPRLGVTVPTLHLGMIFSTSCWHKDPHMLPWTEYLHSGKSRIWYGIPDGQSDNFRKAVETLAPTSCQNKSLWLPSDIAMIPPNLLRDHNVSLARTVQEPGEFVIVFPKAYSCSISTGYAESESVYFASRSWVQNLSQVLKETRESCEPTMFSIEELLVRICADPETDIELLKLVKKDLESVITEELYYRDQLYHRGLEYIKEFGPVPSTSKGRGKRHVPVNNDRELDECDYCRAKLYFSKLCGITGRDSQVCLEHACMLLESNKYKNTPLEQLQLKILVDPHVLHAALFNCQSRVRNSAESSPEGAGEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -