Ccun010559.1
Basic Information
- Insect
- Chouioia cunea
- Gene Symbol
- -
- Assembly
- GCA_030064505.1
- Location
- JAOPFQ010000004.1:23086880-23095928[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00067 0.053 13.9 1.3 1 23 1316 1339 1316 1339 0.92 2 11 6.8e-05 0.0054 17.0 0.3 2 23 1384 1405 1383 1405 0.97 3 11 0.79 63 4.2 1.3 3 22 1532 1551 1531 1551 0.94 4 11 0.2 16 6.1 0.8 1 20 1670 1689 1670 1691 0.94 5 11 0.56 45 4.7 2.0 2 19 1718 1735 1717 1737 0.95 6 11 7.1 5.7e+02 1.2 0.3 1 23 1761 1784 1761 1784 0.95 7 11 0.023 1.9 9.0 0.2 1 23 1791 1813 1791 1813 0.97 8 11 0.0061 0.49 10.9 1.7 3 23 2107 2127 2105 2127 0.95 9 11 0.078 6.2 7.4 0.2 2 23 2467 2489 2466 2489 0.96 10 11 0.0032 0.25 11.8 0.1 1 23 2498 2523 2498 2523 0.97 11 11 3.3e-05 0.0026 18.0 0.6 1 23 2525 2547 2525 2547 0.97
Sequence Information
- Coding Sequence
- ATGGAGTTATTAGAAGAACCATCATCAAATCAAGTAGAAGATAAaagtgaagaaaataaaaatgaagacaattctttaaaagaaaatggtGTACAAAAGTCTttgtcaaaaaagaaatttgccaatacaaattttgcattaaaaatgaaaaataagagaaaagaagaaaaattaaataatcttgAGACTAAAGAAACCACCGACAGTTGTAAACATGTTTCAATAGATGTAACACGTCTTAACTCAAATCCTATGCCTACATTAAATCATGTGGCAGAAAATAGAAACcgtaagagaaaaagaagtcaATGGAAATTGggtataatgaaaaagaaaaagaaaccatTTGGAAAAGATATGAAAACAAGTCCattgaaaaaagaactatTGAATGGAGTTGGTGAAAGTAATGTCACTGAGAATATCAAGACTGAGagtataaagataaaaatggaAGAACCCATCcatcaaatttttgaaaagaaaaaacaagctgACACTCCAAGCAAAGAAAGTtcacaaagaagaaaaagtttgaGAAGTGTTACATCTAGCACGTCTGATCCAAATGTTTATGAATCTGAAAGTAAAGTAGATTCAGGACTTATTGCAATAGAGCATCTTAGTTGCAGAAGAACAGAACCATTCATAGGAAAATTACTTACAAAAGAAGCTAGGGATGAGATTGCTAATCGAATTTTGAAAGCAGAAGCTGAAAAAGTTGCTAGCAACAAtgcaattaatgaaaaaaatattccatcagaaaataaagaaagcaaaactgaagttgtaaataaatcactttttgaatcaaatacaaatattgaaactaATGATAAAACTGATGAAAAAGCTGATAAAAGCACAAAACCTATTGTGATGGATGCTAATGAAAAAATGGTCAATCATCCATCAAGAAGATCCTCATCAAAAATAACTGTAGCCAAAGAAAGtgttaaaattgaagatttaAGTTGTAGTCGTACCATGCCATTTGTTGGTAAAACTGTTAGAAAACTTCATGCTGGTGTACCTGAAAGGCCTATAGACATAGATACTTCAACCAATCAAAGtgataaaaaatctttatcCAAAGACAATACCAATAATCTGGATTCTACGGTagcagataaaaataaattgtctgATTCTCCAAAGGACAAGAATACAAATGCAGAATCAACTTTgggaataaaaattttatgtgTATCATCTTTACAAGATGATAATAGTATCACAGCTGATTGtctaacaaaaaaagttattcaatcAGCCAATGAACCTATCACAATGCTTTCAAAAGAAGCAATTGTTGAttcaaattcttcaaataaaattcatatggACTTGGATACCGCTGCCAATAAAATAGAAGCGAAATCAATGTTATCAAAGAGTACTAGATTGGATACACCAATCACAAGTGTAGAAGAGCAAACTGACtgtttatcaaaaaaaatggataccacaagagaaataataaaatcctCTTCTAGCAGTACCAAGACAGAATCTAGTTCACCTAGTAATATTAGTACGAAAAAAGATAGCTTATTTGCAGAGTTCAATTCAAAACCAATAATGCCAACTGTCAAAGACGTACATGTTCCATGGAGTTGTCAAAGAGTATTGCCCTTTAGGGGTAAAACTAGTTGTTATCTTGAAAAACAACTTGTTACTGAAAATGCATCAAATCAGACAGAAACCCCTTCCActgcattaaaaataaattcagttTCATCCAATGTTCTCACTGTACCATCTGAATATGTTTCTGACAAATTCGGTTCAGAGGAAACCAGTCTTCTTCCCGAAAATATAagtcaaaatgaaataagaaGTGATCCGATAAGTAAAGTCAATGAAGAAGCTAAATCTATCTTGGAACCTTTAAATGATTGCGAAACTAGAAGCTCAACAACTTCTCCAATATTAAATGGAGAATGGAAATTCAGAAGAAAACGCCAAATATTAAGTTCGGATGACGAGAATGAGgaaaatgaaatacaaaaaactaaaacaaCTAAAATCCAATCATCAAACGctaaaaaatatcttgacAAAGCACCTGTTACTCCACGACTTGCTCCTGGAAAACccatttgttcatttttttccccAAAATGTATAAAACACGAACATTATTCCGAAGATGGTCCATGCCCAACATCAAACCACACCCAACCAAAAGCATATGTTTTACTTCCAAGACTGGAGTATATGAAAGATCCTGAAGTAAAAAAGTATCTTTTAAAGACTGACTTtgttaatacaattaaaaaaagctatCGACGGATATTGGTGAACAAAGATATTAGTGATACTTCGAAGATGaaacgagatagagagaaatcTATTTCTACATCAACACAAGCTACCAAAGACAATCTTGTTTCATTAAATGAGTCAGAAATAGCCGAAGGAAACAATTCTAGTACTTCGTTTGGATTAAGTAACGAATACGAAAAACCTAGCAATAAATCTATTTCAGCGATCAAATCGCGAAGACGGACATCTAGTAGGATTTCTCCGGAATCACAAATTCTACAtgcgaaaagaagaaaaggaccCGTCAATTATCTAGAACATCTCAGTGATACAGACGATGAGAAAGAGTCGTCCCAGCAAACACCAAAATTACAGCAATCGaGTCAAGGGTCAATTTTACATAATCGTGACAAGTTGGTAGTCCAAAGCATCTTGGAAAGGGATGAAAACGACATGGAGGTCGAGGAATTTTCACGAGTCGGTCGTCAGAATAGAACGGAAGATTCCAATCAGGAAGACTCTGAACAGGATGCAAACTGTTCGCGAACCAAGGGTATTAAAGCTGCAGATGTATCTATAAATGTTCAAGCTAGATGTAAAAGCGTCGCTGAAAGAAAGATAAGTGATACTCTGATGTATCCAACGAGATCAAAGACTCCGCATATTGGTATGCCAATGGAACAAAATGTTGTGTTAAGTGCAAGCGATATAGATAATAAGAAATTGGAAGAAGATCTTGTTCAGGGACTCAAATCTATGGAAGAATCAATTAACAAAGAGATGGAAAAGATGGGACTTATTCCAACTGGTTCAAGCCAGCGTGTAGGCAAGAAAACTATCGATCGCAGTCGACAAGTTTCCAATGAGTCTTTACCTTCGACACCAAGTGTCCTCGTGAATAAATCGCTTATGCCTAAAAATATCGTGGGAGCACCTTCGCAAAACGAAACGACAAATCCATCAAATACCGTATCTATTACTCCACGAAGGTCTGTGTCTTTTCAGAGAAACGAATTGCTAGCAAAGGTCACCAAGTCGGCATCAGAACTACTAGAAGCtgacagaaagaaagaaatgaaattaaaagatattcGGGTTCAGCTTATAAAATTGGAAGCCGTGTGTAGCGATTATAAGGACTACTCAGCTGGAGAAATTGAATTACTAACGAACAAGTATATTGACATGCTGATGAATTCGAACTTTGCATGTGACACTTGGCGTGTCAATCCCATAAAACTTGCAACAACGTATACCCGTACAATTGATTTACGCGGCAATGAAGGCGATTCTGATTGTGAATCTCCAGACAACGAACCATTACCATTCGAAGAAGTGCAAGTTCCTATGGATTCCGCTAACATGGACTTTGATGCTACTGCAGAGCAAAATACCATCAACGAAAGCCTGAGGCATAAGTCTTCCACAAAGTCGGGTAAACAACCCACTGATCTAGAGTCTGCGATGGCATCGTTCTCTCAGAAAATTAGCTCGCCAGAAAAGACCTTTGGGGCAATCAACATATCGGATGTCTTGAGTCAGCCAGCAGCCAATGAAGAAGATACCGAGTATAATAGAACAGCCGATTCGAACATTGAAGACGATGCCAACGAGAATGACGATTCGGCCGTTGCTGCGAAAGTTTCCAGTGTGATTTTAGTTAACGGAACGGAAATGCACACTTGCAATTTCTGTAACAAGATTTTCGTGGAAAAAGAGCTACTTCAGAAACATCTCGATGAAGAACACGATATTAGTGAGAAGTCCTCTATCGGCCAAACCATTTCTTCGAAATCCGCTAAGAAACAAGCAGGTGAAGCTCCAGGTCCTGCATCGTCGAAGAAAGCAAAGTCAAGAAAATTAAGATGTAATGAAAGCCTTCAGTGCACTATATGTTCAGAGACGTTCGGGACAAAGGAATTGCTGTTTGACCATATAATGACGCATAACGAAAAGGACCTGCAACAAGCTTATAAGGCTGCTAAGTTAGCGAAACTCCAAGAAAGCGGTGAAACGAATGTATCGGAACACTTTGAGGAGGAACAAACCAATAGCAAGAAACAGAAACAGAAGAATTTACATAATCGCAGGAAGAGTACCGACAGTGCATCAACAGCAGTCAGCGGCGAAGAGCTGGCTACTGATGATTCTGCGAAGACAACTACTTCGTCGACTGATTCTGCTCCACAACAGATTGCAAATTCAGGCATCTTAGTCACCGCTCGAACACTACCTGCCACTTCCAGTAATAATGCCTTGACGATCTGCCAATGCCACGCTCACGAATTAACAACTCAAGATCTCCATATCGAAATGGTATTGCTTTGCACGGCAtgcaatgttatttttcgtaGACGTGACTGCTTCGAGATACATTTCCGCACCAGCTCGGAGTGTCGTCGTAAACGCGCCAACAGCGAAGTAACCAAGGTCCCAAAGCTCTTCTGCAGTGGCTGTCGATGTATCTTGAACTCGCTCATGGAAATGCGCGCTCATTTGGAAGAACATGCTCAGAAAAATTGTACTGGAACCGTAACTTTCTTGTGCAATATTTGCAAAGTGGCTTTCTTCGGTGTTGGAGGAATTTTCTATTCTCATTGGTTTAATCATGCGAAGTCGCCTAATTTTGTTGCTAGTCGTTATTCATTCCCTAAACTATCAGTGGTATCTGTACTGGAAGATATTAACGGGACTATGACGACGAGCAAGAGTCAGGAAGGATTCTTCTACATTGCTGAGCATGTTTGCCGAGAGTGCAGGTTGCCGTTTAGCTCCGATCCCGAGCTTCAAAAACACAAGGAACATCCTTGCCTACCTCCCCAACCTGTCGCCGCACCACGCGCCGAACCGCTGGATAACAACCGACTTCAAATGATAAAGCTTATCTGCGACCTGTGCAAAAAATACTACGTCAGCAAAGATAATTTTGACAAGCATTGCAACGATCGCAACCATCTGAAGACACCTATTACCAAGTTCTCCCGATTACCCATCAACGCAACCGACCAAGTATTTGTCTGCAGTCTGTGTCGCGGCCTTAGTAAGACTTTAGATGAGATGAAAGAGCACTGGAAGCGCGTGCACAGTCCTATAATGGAGTTGTACGTTTGTGGCATCTGTAAGTTTGGTTTTGAgactgaaaaatcaatgaaagaACACGAATTGGTACATCAAAAGAAGATTCCAATTCAAAGCGCTCCTGTCCAAACTAATACAGCTGCAATAAATTTGGGAAATACACAAAGTACAACGTTCTATGTGACTGACGCTCCACAGGTGGATGGGGGCCGACGATTACATCCCGTGGTTGTGCAGTATCCTAATATCAATGGAAGTGCCGTCGGTCCAGTGGCGATAGGCCAGTGTTCATTGCCAAACCAACCGCACCTACAATCGCCTAGTCAAATGAACACGTCGATTGCCGGTATGggcaatcaaattttaatgcCAAGTACGAGTGTGATAAGGATGCCAAATACTACGGCTGCCAATACTGATGTCAACAGCGAGTTACGTAACACGTGGAAAGGCGCAGTGCCAGGTCACAACCAACAGCAAAGTACAGCTATTACTCAGGAGCAACAGCAATCGAAAGTCACCAAGATAGTCGAAACGATAGAGCTCGACTCAAGGTCCAACAGTCCAATACTCGATTCGTCAGCACCGAGTACTTCCGGGAACTCGAACTCACTGGCCGCTACCAAAAAGGCTTACATGACTAAAGTCAATCCCAATTTCGAGACGATCCTCGCCACAACGGTCAATCAAGAGAATCGCAATAACAGCAGCACTCCGGAATCCGACAAGAGTAGAGATAATCGTGACGATAACTCTACACTCGTGGAAGTTGATACTTTAACTCCACAACCTTTCGAGGTGGTGCTCGTAACCGACGAACTCAGCGAAAATTCCGATCAGAACAAAAACGACAATCAAGGCTCTACGTTGGATGAACATCAGCCACAACAGCAAGCTGTAGAAATAATCGAAACGAAATCGTTCCTGCGTGTTCGTTCGGTTGCTGAACTTCAGAGTATAAAGATTCATCTTTGTTCGGTATGTGGATTAAACTTTGACACACCTCATGCATTTGAGCAACACGAAAGACAGCATCGCATTTCGGGCGAAGTGGGACGTTCTACTCCTGTGCAGATGATTTCACCGATGCTATCACCCGGTAGTAAAGAAGCAACGGATGATCCGAATAACGCACTTTTGACGCAAATCAAGCAAAAGTTGGCTTTGGGTATATCTAACGGGCCGAGCGGTTCTACCGTCAGTACAAATGTGAATACTAGAGTAATGCCAAGTGTACTTCCGCATCAACCCGTGTTACCGCCCCAACAGCAACAATCGTGGTATCCAACGTCTAGCAATACTAATACAATGATATCGAATATCAATTATGCCACAAATCAGCCActgcaacaacagcaacaaagtGTTCTTCGACAGACAATTAACTCAgcacaatataaaaatagctaCACAACAATTCGACCTCCGCCCCCTTATCCCGGCGCTTCCAATTCCATGGTGGCATCCGGCCGACCAAGTGCCATACAGCTTCCAGAGCGTAGCACGGCTGGCAGTATCCCACCACAAACCAAACGACCGTCAGGTGCAGCTACGAGAATCCCTCAACAGAGCTTACAAAGTTATGAAGACATGAATAGTCGTCAAACCGTAAGTTCGGTTTGGGGTTACAGCTCGGGTGGTACAATGGCTTACAACCCATCACCTCAACAGTGTGTCGTTCAAAAAACATACGGACCAGCGTCAAGTACCGTCAATTACTCCACAGTGAACGGCCCTGTAAACTACCAAAGCGTCCCTCAATCCCAATCgcgacagcagcagccacAGAAGAATATCATTTACACCTGCAAGCATCCGAATTGCTTTTATCGCTCAGCTAGCCTCGCGGGTATTCGTGCACACGAAACAATCCATTTATTACCTCAACAAGGGCAACAGCATCAGCAAGTTCCAACTACGTCCAATAaccatcagcagcagcaacagcaaccacCACGTCTTCTACCCGTTAGTCAAATGCCTGAAAGGACTCGTCACGCGTTACCTACCAGTAGGCCACCTGGTGCCTCCAATAATCAGGATAAACGTATTACTTGTCGTATCTGCAATTTGAATTGCGCGACTAGTATTGAATTGATCGAGCACGTGTCGACGGTTCACAGCGGTGCCAATCAAGTTTGCTGCTACGTGTGTGATTACTGCCCGTCACCGCTGATCTTCGACACCGAGGATCAGCTGCGTAAGCACATGAACATCAGTCATAATCATTCGTGCGAGATTTGCAATAAAAGGTATCCCTCGAAAGAGGACTTGATGTTACACATGGAAGTTCACATGCGGAGGCCTTGA
- Protein Sequence
- MELLEEPSSNQVEDKSEENKNEDNSLKENGVQKSLSKKKFANTNFALKMKNKRKEEKLNNLETKETTDSCKHVSIDVTRLNSNPMPTLNHVAENRNRKRKRSQWKLGIMKKKKKPFGKDMKTSPLKKELLNGVGESNVTENIKTESIKIKMEEPIHQIFEKKKQADTPSKESSQRRKSLRSVTSSTSDPNVYESESKVDSGLIAIEHLSCRRTEPFIGKLLTKEARDEIANRILKAEAEKVASNNAINEKNIPSENKESKTEVVNKSLFESNTNIETNDKTDEKADKSTKPIVMDANEKMVNHPSRRSSSKITVAKESVKIEDLSCSRTMPFVGKTVRKLHAGVPERPIDIDTSTNQSDKKSLSKDNTNNLDSTVADKNKLSDSPKDKNTNAESTLGIKILCVSSLQDDNSITADCLTKKVIQSANEPITMLSKEAIVDSNSSNKIHMDLDTAANKIEAKSMLSKSTRLDTPITSVEEQTDCLSKKMDTTREIIKSSSSSTKTESSSPSNISTKKDSLFAEFNSKPIMPTVKDVHVPWSCQRVLPFRGKTSCYLEKQLVTENASNQTETPSTALKINSVSSNVLTVPSEYVSDKFGSEETSLLPENISQNEIRSDPISKVNEEAKSILEPLNDCETRSSTTSPILNGEWKFRRKRQILSSDDENEENEIQKTKTTKIQSSNAKKYLDKAPVTPRLAPGKPICSFFSPKCIKHEHYSEDGPCPTSNHTQPKAYVLLPRLEYMKDPEVKKYLLKTDFVNTIKKSYRRILVNKDISDTSKMKRDREKSISTSTQATKDNLVSLNESEIAEGNNSSTSFGLSNEYEKPSNKSISAIKSRRRTSSRISPESQILHAKRRKGPVNYLEHLSDTDDEKESSQQTPKLQQSSQGSILHNRDKLVVQSILERDENDMEVEEFSRVGRQNRTEDSNQEDSEQDANCSRTKGIKAADVSINVQARCKSVAERKISDTLMYPTRSKTPHIGMPMEQNVVLSASDIDNKKLEEDLVQGLKSMEESINKEMEKMGLIPTGSSQRVGKKTIDRSRQVSNESLPSTPSVLVNKSLMPKNIVGAPSQNETTNPSNTVSITPRRSVSFQRNELLAKVTKSASELLEADRKKEMKLKDIRVQLIKLEAVCSDYKDYSAGEIELLTNKYIDMLMNSNFACDTWRVNPIKLATTYTRTIDLRGNEGDSDCESPDNEPLPFEEVQVPMDSANMDFDATAEQNTINESLRHKSSTKSGKQPTDLESAMASFSQKISSPEKTFGAINISDVLSQPAANEEDTEYNRTADSNIEDDANENDDSAVAAKVSSVILVNGTEMHTCNFCNKIFVEKELLQKHLDEEHDISEKSSIGQTISSKSAKKQAGEAPGPASSKKAKSRKLRCNESLQCTICSETFGTKELLFDHIMTHNEKDLQQAYKAAKLAKLQESGETNVSEHFEEEQTNSKKQKQKNLHNRRKSTDSASTAVSGEELATDDSAKTTTSSTDSAPQQIANSGILVTARTLPATSSNNALTICQCHAHELTTQDLHIEMVLLCTACNVIFRRRDCFEIHFRTSSECRRKRANSEVTKVPKLFCSGCRCILNSLMEMRAHLEEHAQKNCTGTVTFLCNICKVAFFGVGGIFYSHWFNHAKSPNFVASRYSFPKLSVVSVLEDINGTMTTSKSQEGFFYIAEHVCRECRLPFSSDPELQKHKEHPCLPPQPVAAPRAEPLDNNRLQMIKLICDLCKKYYVSKDNFDKHCNDRNHLKTPITKFSRLPINATDQVFVCSLCRGLSKTLDEMKEHWKRVHSPIMELYVCGICKFGFETEKSMKEHELVHQKKIPIQSAPVQTNTAAINLGNTQSTTFYVTDAPQVDGGRRLHPVVVQYPNINGSAVGPVAIGQCSLPNQPHLQSPSQMNTSIAGMGNQILMPSTSVIRMPNTTAANTDVNSELRNTWKGAVPGHNQQQSTAITQEQQQSKVTKIVETIELDSRSNSPILDSSAPSTSGNSNSLAATKKAYMTKVNPNFETILATTVNQENRNNSSTPESDKSRDNRDDNSTLVEVDTLTPQPFEVVLVTDELSENSDQNKNDNQGSTLDEHQPQQQAVEIIETKSFLRVRSVAELQSIKIHLCSVCGLNFDTPHAFEQHERQHRISGEVGRSTPVQMISPMLSPGSKEATDDPNNALLTQIKQKLALGISNGPSGSTVSTNVNTRVMPSVLPHQPVLPPQQQQSWYPTSSNTNTMISNINYATNQPLQQQQQSVLRQTINSAQYKNSYTTIRPPPPYPGASNSMVASGRPSAIQLPERSTAGSIPPQTKRPSGAATRIPQQSLQSYEDMNSRQTVSSVWGYSSGGTMAYNPSPQQCVVQKTYGPASSTVNYSTVNGPVNYQSVPQSQSRQQQPQKNIIYTCKHPNCFYRSASLAGIRAHETIHLLPQQGQQHQQVPTTSNNHQQQQQQPPRLLPVSQMPERTRHALPTSRPPGASNNQDKRITCRICNLNCATSIELIEHVSTVHSGANQVCCYVCDYCPSPLIFDTEDQLRKHMNISHNHSCEICNKRYPSKEDLMLHMEVHMRRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -