Basic Information

Insect: Chouioia cunea
Gene Symbol: -
Assembly: GCA_030064505.1
Location: JAOPFQ010000005.1:26161507-26166737[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0052 0.41 11.1 0.7 1 21 90 110 90 111 0.94

2 14 0.18 15 6.2 4.8 1 23 119 142 119 142 0.95

3 14 4.1 3.3e+02 2.0 0.2 3 21 151 168 149 169 0.78

4 14 8.3 6.6e+02 1.0 0.7 3 9 229 235 228 236 0.90

5 14 0.00065 0.052 13.9 0.1 1 20 256 275 256 277 0.95

6 14 0.042 3.3 8.2 1.9 3 23 285 306 283 306 0.94

7 14 2.6 2.1e+02 2.6 0.7 1 11 312 322 312 327 0.89

8 14 0.0011 0.084 13.3 3.7 1 21 352 372 352 373 0.96

9 14 0.0019 0.15 12.5 0.7 1 21 417 437 417 438 0.95

10 14 0.00031 0.025 14.9 0.2 1 21 457 477 457 478 0.94

11 14 2.1e-05 0.0017 18.6 2.0 1 23 485 508 485 508 0.97

12 14 0.00047 0.038 14.4 1.4 1 22 529 550 529 550 0.96

13 14 0.0026 0.21 12.0 8.8 1 23 558 581 558 581 0.95

14 14 7.5e-05 0.006 16.9 2.5 1 21 590 610 590 611 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0052	0.41	11.1	0.7	1	21	90	110	90	111	0.94
2	14	0.18	15	6.2	4.8	1	23	119	142	119	142	0.95
3	14	4.1	3.3e+02	2.0	0.2	3	21	151	168	149	169	0.78
4	14	8.3	6.6e+02	1.0	0.7	3	9	229	235	228	236	0.90
5	14	0.00065	0.052	13.9	0.1	1	20	256	275	256	277	0.95
6	14	0.042	3.3	8.2	1.9	3	23	285	306	283	306	0.94
7	14	2.6	2.1e+02	2.6	0.7	1	11	312	322	312	327	0.89
8	14	0.0011	0.084	13.3	3.7	1	21	352	372	352	373	0.96
9	14	0.0019	0.15	12.5	0.7	1	21	417	437	417	438	0.95
10	14	0.00031	0.025	14.9	0.2	1	21	457	477	457	478	0.94
11	14	2.1e-05	0.0017	18.6	2.0	1	23	485	508	485	508	0.97
12	14	0.00047	0.038	14.4	1.4	1	22	529	550	529	550	0.96
13	14	0.0026	0.21	12.0	8.8	1	23	558	581	558	581	0.95
14	14	7.5e-05	0.006	16.9	2.5	1	21	590	610	590	611	0.95

Sequence Information

Coding Sequence: ATGATGGAATATCTCCAATTGTTTCacttaaaaaatgaagtaaagCAAGAAGTAGCAAACTGCCTGAACGtgaaaaacgaagaaataacCGATGATCGTTCGGATGATAATTCCTCATCAGAACAAGAAGAATACATCAATCCATTCAGCGTTGTAAGTCCAACGAAAAATCCAAGAATGGTTCATTGTCCAACGTGCGAAGTATCGGTTAGTTACATTCCTCTGAAAACCTCGAAACATTGCCAAAAGTGCAACGCCAAATGGCAATTTCAATGTGGAACTTGCGATAAGATTTACAAAGAGATGAAATCGTTGAGAGAACACGTAAATCACGTGTGCAACAAAGAGCCGCGTTTCTCGTGTAATCAATGTGATTATAAATCGCACTACGAAAGAACTTTGAAGACGCATCAACTGAATAAACATCCGAAATGGTCGAAAAGAGTGATGTGTCCGAGATGCGGAGAAACTAAGCAACAACAATACATAAAGAAACACATGGAAACGGTTTGCGGAATCAAGGATCCATTGGTGATTCAACAAATATGTGGCAAATCTATTACTCGCGTTAATCCAAAGATTTatgTAGATTCGGATGACGACGGATTACTCGAATCGCTAACCCCGGAAGTCGAGTTGAAGAAGCGACCAAAACCATCAGaTTCTCAATCGAAGCTAGTATTCTGTCCAAAATGTAACAAATCTAGACAATACGTAGCACGTAAAACTCCAAAAGTTTGCGACAAATGTAAAACGGCATTCCAGTATCAATGCGAGAGATGCAATCGTATGTATCGTCGTGTAGATGCATTAACAGTTCACGTAGCATCGCAATGTTTACAATTGTACGGTTGCAATCATTGCGAATTCAAAACAGAAGACAAGCACAGTTTAGAGCAACACGTGCTACTTGCACATACAAGGCCTGGAAGATATCAATGTAATCGTTGTGAAATCGAATTTACCGAAGAATTCAAGTACTCGCCGGCGACGTTACAACAACCTTTATTACGCATCGCCAGTGTTTCGTCTGTGTCAAACATTGGAAGTGACTACAGATGTTGCACTTGTAACAAAACTTACAAAACAGAGAGATTTTTAAACGCTCATCTGAGAAACGTTTGCAACAGAAAATCGAATGTATTTGACGAACaagacgacaacaacaacaacaagaactATAAATCTAAAGAAGATGTAATAGAACCCATTGACGTTGACGATACCAAGCCTGGTTCTAAAAAGATATACAAATGCGAAAAATGCTCGAAAATTTATCAGGTTAAAGGTAGCTTGTCTAGACACGTCAAGTTCGAATGCGGCAAGAAACGTGTTTTTGTGAAAAAGCGTACGTCTACGGGCAACATTTACGTATGTAGCGCTTGCAACAAATCGTACAAAtggaaaagtaatttaaaacgtCATTTAATAATCGGATGTGGTAAACGAGAGTACGACTGCGACCATTGCGGTTACACTTGTTCACAGAAAGGAGATATCGTAAGACACATTAGATCGATACACAATTCTTCGAAACCCTTGAATAGCGCTAAAACAAGAAATttagaaaagtataaaaaatcatacaaatgTGAAACGTGTAATAAAACCTTTGTCTACGAATGGAGGTTGACTACTCACAAAAAAACCGAGTGCCAAAAGGATACAGTTTTCCATTGTACACATTGTGACTTTTCCactaaaacaaaaatgcaCCTGACCAAACATATCAAAGGCAAACACGAGGACATTGATTCAGCGTGCAAGTACAAATGCGCAAACTGTAACAAGGTCTATTATCACAAAGGTAGTTTAAAAAGACACACCAACTACGAATGCAAGAAATGA
Protein Sequence: MMEYLQLFHLKNEVKQEVANCLNVKNEEITDDRSDDNSSSEQEEYINPFSVVSPTKNPRMVHCPTCEVSVSYIPLKTSKHCQKCNAKWQFQCGTCDKIYKEMKSLREHVNHVCNKEPRFSCNQCDYKSHYERTLKTHQLNKHPKWSKRVMCPRCGETKQQQYIKKHMETVCGIKDPLVIQQICGKSITRVNPKIYVDSDDDGLLESLTPEVELKKRPKPSDSQSKLVFCPKCNKSRQYVARKTPKVCDKCKTAFQYQCERCNRMYRRVDALTVHVASQCLQLYGCNHCEFKTEDKHSLEQHVLLAHTRPGRYQCNRCEIEFTEEFKYSPATLQQPLLRIASVSSVSNIGSDYRCCTCNKTYKTERFLNAHLRNVCNRKSNVFDEQDDNNNNKNYKSKEDVIEPIDVDDTKPGSKKIYKCEKCSKIYQVKGSLSRHVKFECGKKRVFVKKRTSTGNIYVCSACNKSYKWKSNLKRHLIIGCGKREYDCDHCGYTCSQKGDIVRHIRSIHNSSKPLNSAKTRNLEKYKKSYKCETCNKTFVYEWRLTTHKKTECQKDTVFHCTHCDFSTKTKMHLTKHIKGKHEDIDSACKYKCANCNKVYYHKGSLKRHTNYECKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -