Basic Information

Insect: Chouioia cunea
Gene Symbol: Rreb1
Assembly: GCA_030064505.1
Location: JAOPFQ010000003.1:5924613-5935398[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.046 3.7 8.1 0.0 1 23 51 73 51 73 0.96

2 14 0.00014 0.011 16.1 0.3 1 23 92 114 92 114 0.98

3 14 1.8e-07 1.4e-05 25.1 1.3 1 23 120 143 120 143 0.98

4 14 0.13 11 6.7 0.1 2 23 216 239 215 239 0.92

5 14 0.042 3.3 8.2 0.2 1 23 418 440 418 440 0.97

6 14 0.00021 0.017 15.4 0.4 1 23 449 471 449 471 0.98

7 14 0.00098 0.078 13.4 2.8 1 23 477 500 477 500 0.97

8 14 0.0023 0.18 12.2 1.7 1 23 826 849 826 849 0.96

9 14 0.00052 0.042 14.2 0.1 3 23 1087 1107 1085 1107 0.97

10 14 0.73 58 4.3 6.5 1 23 1113 1136 1113 1136 0.97

11 14 0.0016 0.13 12.7 2.6 1 23 1214 1238 1214 1238 0.93

12 14 4.3 3.5e+02 1.9 2.5 1 23 1334 1357 1334 1357 0.86

13 14 0.0089 0.71 10.4 0.4 2 23 1409 1430 1408 1430 0.94

14 14 0.0098 0.78 10.2 5.9 1 23 1436 1458 1436 1458 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.046	3.7	8.1	0.0	1	23	51	73	51	73	0.96
2	14	0.00014	0.011	16.1	0.3	1	23	92	114	92	114	0.98
3	14	1.8e-07	1.4e-05	25.1	1.3	1	23	120	143	120	143	0.98
4	14	0.13	11	6.7	0.1	2	23	216	239	215	239	0.92
5	14	0.042	3.3	8.2	0.2	1	23	418	440	418	440	0.97
6	14	0.00021	0.017	15.4	0.4	1	23	449	471	449	471	0.98
7	14	0.00098	0.078	13.4	2.8	1	23	477	500	477	500	0.97
8	14	0.0023	0.18	12.2	1.7	1	23	826	849	826	849	0.96
9	14	0.00052	0.042	14.2	0.1	3	23	1087	1107	1085	1107	0.97
10	14	0.73	58	4.3	6.5	1	23	1113	1136	1113	1136	0.97
11	14	0.0016	0.13	12.7	2.6	1	23	1214	1238	1214	1238	0.93
12	14	4.3	3.5e+02	1.9	2.5	1	23	1334	1357	1334	1357	0.86
13	14	0.0089	0.71	10.4	0.4	2	23	1409	1430	1408	1430	0.94
14	14	0.0098	0.78	10.2	5.9	1	23	1436	1458	1436	1458	0.98

Sequence Information

Coding Sequence: ATGGATTTTTCTATCGCCAAAGtgacGGCCGAGACGACTGGACCCGACGACGAGAACCGAGCGGATGTTGCATCATCGTCTCCACTGTACCCTTACTCGTTCAAGGTCAACCTCGACAAACAAccacaacaacagcagcagcagcaacagcatccGTGTCCAGCTTGTCCTGCAGTCCTTGGCAGTAGCCGCGAATTGACGACTCACTTGCGTGGCCACAACAGCGCaacgagcagcagcagcaacgcggCAACGACCGACGAGGACGAGTCGTATTCTTGCGGAGTTTGCCACAAAGTCTTGTCATCGGCATCGTCCCTCGACCGACACGTACTTGTCCATTCGGGCGAACGACCCTTCAAGTGCAAATACTGCGACATGGCTTTCACGACCAATGGCAACATGAACCGACATCTGAGGACAGCGCACGGTGGTGCAGTGGCTGCTAGTAGTTGCACCGACTCCGAGGCAAGCAGCGACTCGGAGAGGCCGACCTCGATGAAGGCAgaatacaacaacaacgagGTAGCCAAGAGGACGTCGCCGACATTGAAGAGGAAACATCCGGAAGAGAGCGACGGACTGAGAAGGCACAAGGTACTATTGAATAACTCCAGAACGGAAATCGATCAGGTAGCCAGTCTCAGTTGCAACGTCTGTGGCAAACGTGATTTCGCCAGCGACGCTCAGCTCGAAGCACACTTGGAACGCAATCATCCCAAGAGCCAAAGAAATTCCGTGGTTGGTTTCAACGATCTGACCTTCGTCGACTTTTCGTCGGGTAAATTTCCAGCCATCGCGCGGGCGGTCTGCGAGCAGTCCATCCATCGACCGGTTTCCGGTGAGACGGCGAGGTATCAGTGTTGCAAGTGTCTACGTGGTTTTCCCTGTCGCTCGGCATTGGATGCCCACGAAATTGATTGCGGACAGATGCCGCTTACCGAGCGTCGCGATCAATCGTCGCGCGACGACTTTTTCGCTGGCCTGGACCTTCAGAACAAGGCAGCGTTGGCCGAGGCCAAAGAAGGCAAGGATCTCGCCGATATCCAGAGTATCATTTCCGTGACCTCGGGACCGATACTGCAAAATTTTTCGCGATCGGACGCCAGTACACCCGACAATTGCAAGATCAAGCAGCAAACCTTCGGCTCGTCGGGCTCCTCGGGCACACCCTCCTCGGAGTACGCGCACGAGGAAGAAGCACAGGATGCTTTCGCCGCCGAGTTTCGCAAAATGAAGCTCAAGGGCGAGTTCCCGTGCCGATTGTGCTCTGCTGTCTTTCCCAATTTGCGCGCGCTCAAAGGACACAACCGACAGCATATGGACGTGCGGCCTGGTATGCCTTATCCGTGCAACATGTGCCCTTACAACAGCATGGATAAAGCGACCTTGCAGAGGCATTTGAGATCGCACAACGGCGATCGACCGTACGAGTGCTCGCTTTGCAACTACGCGTTCACGACCAAGGCCAATTGCGAGAGACACGTGAGAAACCGACACGGCAAATTATCGAGGGAGGAGATCAAGAGCGTGCTGATCTACCACCCGAGCGAGGACTCGACGAACGACGGTAGTCTCGAGAGGAGCTCGGACGCGAGAAAGAGTCTGGTGTATCACGACGAGCAAACGCCGCCGACGCCGACCCACTATCCCGGCGAGATACGTATCAAGGACGAGGCTAAACTACGAGCACCGACCAATATACCCGCTTTGCATCCTATCGCCGAGAGTATGTTCTCTCGGCCGATACAGCCCTTGGAATTGACGTACGCCAGTCGGGCGGATGAAGCACCGAAAGCCATGGACGAAGACGCCGATTCGAGATCGTCGGACGGTAGCGTGAAACTCGTCGACGAACCCAAGCGGGTCGACGTGGACGAGCCAAAGAAATCCGAGGTATCCAATACCAACGGTGAAGACGCTCCGCTGGACTTGTCGATGGACGTATTGGATCTTAGCAAGAAGGCCGCGGCAGCcgcagcggcggcggcggcggcggtggcagCATCGGCGGTCAAAACCGAGCAGCCCAAAGACTTTTACAGCGCGACCAATCAGTTGCTTCTCACGCAAGCGTTGCTCAAGGCGAACGCCCAACAACCGAGCTCCTTGGAAAGTTACTACGCCTCCCAAGCACACATGCTTTACAGAAATTTTAGTTTACCGTTGCCGCCCTACCTCTTCGGACCTCATCTCTTCGGACAAGATTTTATCAAGCAAGATCGATTGCAAAAAGAGCTCGTGCGAGGATTGCAGACCAGCGGAGGTAGCCTAGTCGAGCCTGGCTTTCCGACTTATCCACAGCCAGCGGTGAGGAATCCCGAGCCAAACGATTTTACGTCGCTGAGCAAACTTCCAAGCAAAAGTCCAAGCGAGAAACCTCCAGCGTCGCAAAATTCCTCGGTCAAGATGGTTATCAAGAACGGCGTGCTGATCCCAAAGCAAAAGCAGAGAAGATACAGAACGGAAAGACCGTTCACTTGCGAGTTTTGTACGGCGCGATTCACGTTGCGAAGCAACATGGAGCGACACGTGAAACAACAACATCCGCAACACTGGTCACAGAGACCAAGAGGTGGACACTCGACGAGGGGTCGACCACCGGCGAACCCACCCACGCTGCTACACCACTTGAATCAAAATCAGCAGTCTTACGCAGGTTTGCTACCGTCGCAAAGCTTGAGTCAAGATTACGGCAAACACGCGATCTCGGATCAAGTGAAGTACGCTATCTTGGCGCAGCAGTTGAAGGGTAACAAGGCTGATGATAACGAGTCGGACGAGGACTTGGTGATCGATGAAGAGAAACATGCCGAGGCCAAGGAACCATCCGAGAGAACGTTGAGTTTGCTGAGAGGCAAATTGGAAGCCAACATCGAGTCCAAGGCTAACGACGAGGTCAAagacgaaacgaaaaaagaactcGATTGTTTTGACAAGGAGGACGAAGAGCCGGTCAAGATGGAAATATGCCCCGACTTTAAGGAAGAGCATTTGATGGGTGAAGACCTAGCCAGTGTATCCGAGATAGTCGACAACGCCAGCCAGAATTATCCTCAATTTCATTCTCGCTACATGAGCGACGAGGAAGGTCTTGTTGCGTCGACGAGCGATTGCAATCAATCGGGTAGCGATGAGAAATCCGACTCGATGAATTCCGGTAACTCGGGTCACTCGTCGAcctccaaaaaaaagaagaagatgaaaaagaaaaagaagaagaagtctGCTTACTCAATGGCGCCGAATCGTGTGATTTGTCCGTATTGCGAGAGACCCTTCCCGTGGACGTCCTCGTTGAGAAGACACATCCTCACGCACACCGGACAGAAGCCTTATCAATGTATGCATTGTTCGTTGCTGTTCACTACGAAGAGTAACTGCGATCGGCACCTATTGAGAAAGCACAAAAACAGCATCAACAAAATAAGGAGAACAAGAAGCACATCGTCGCCGGAAATCCAGGAATCCCCACCAGTGAACCACGTTCCTacccagcagcagcagcagcagcagctacagCAACaagagcaacagcagcagcaagaaCAAGagcagctgcagcagcagcaaccacagcagcaacagcagcagaatAGTAACAGTCAATTCACGATAAGAAACGTGCCAGAGAGGCCATACAAATGCAACCAGTGTCCAAGCTCGACATTCTCAACCAAAAGCAATCTGAAAAAGCATCGTTCGGCAAAACACGGCCAATACATCAAATCTCGACCCGAATCGCCGCTAAGCGAACCACAGCATAGTCCACAGGAATGTCCAAACCCCCAACAACAAGACTGCCCTCAAGAAGAGACTAAAAGCAATAACGATCAGAGCGGTTACGAGAGTCAATCGTCGGGAGTATCCGAGCCAACGCCTATGGATATTTCGAAAACGTCATCCAACGATGCGAGTAGATCGCGCAGAAATTCGCCAATATCATCACCAGTACCTAATCCTACCAACGCcatcaacaataataataccgAGTCGCCGTTCAAGTGTCATCTTTGCGACAGTGGATTCGCTGAGAGGCAGGACTGCCTTGAACACATCAAGGACAATCACGAGCAATCTTACGAAATGCTCGTTGCCAAGGGGGCTTTGGATATGGATATCGATAGCCTCGAGGAACAAATGCCACCTGCGCCACCACCGCCTCAACCAAGCGATGGTGAGGAAAGACGTGGCAGGTTTCCCGATTACAGCAACAGAAAGGTAGTCTGCGCGTTTTGTATGCGTCGCTTTTGGTCGGCGGAAGATCTTCGCCGTCATATGCGCACGCACACAGGCGAACGTCCATTCTCGTGCGACGTATGTCGACGACGTTTCACCCTCAAACACAGCATGCTACGTCATCGTAAGAAACACGGTTGCGCCGATTCGAGCATGTACGTTGGTACCAGCGGCGACGAGGATAACAATACACCACCGACGTTGATGTCACAGCAACCAGCTCCATCAGCGCCACTTCAAGATCGAGCGTCGCTTCCTCAAGTTGCCAGTGTAGCCACTGGTGATGCGGCGCCTAGTCTCGCCATGAGATTTAATTTGGGTAAATTGTCAGCTGGAATGTCGCCGATTCACGTGGACGCCAACGATAATACAGATAACACAGATTTGATTTCGAACCTGTTGGGTATCAGGGACAAGAGTATCATCGACAGGGCATTACAGTCGTCGATCGACGATGCGGCCAAGCTCATTGGTATCAAGGGCAACCACGACTGA
Protein Sequence: MDFSIAKVTAETTGPDDENRADVASSSPLYPYSFKVNLDKQPQQQQQQQQHPCPACPAVLGSSRELTTHLRGHNSATSSSSNAATTDEDESYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGGAVAASSCTDSEASSDSERPTSMKAEYNNNEVAKRTSPTLKRKHPEESDGLRRHKVLLNNSRTEIDQVASLSCNVCGKRDFASDAQLEAHLERNHPKSQRNSVVGFNDLTFVDFSSGKFPAIARAVCEQSIHRPVSGETARYQCCKCLRGFPCRSALDAHEIDCGQMPLTERRDQSSRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPILQNFSRSDASTPDNCKIKQQTFGSSGSSGTPSSEYAHEEEAQDAFAAEFRKMKLKGEFPCRLCSAVFPNLRALKGHNRQHMDVRPGMPYPCNMCPYNSMDKATLQRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDGSLERSSDARKSLVYHDEQTPPTPTHYPGEIRIKDEAKLRAPTNIPALHPIAESMFSRPIQPLELTYASRADEAPKAMDEDADSRSSDGSVKLVDEPKRVDVDEPKKSEVSNTNGEDAPLDLSMDVLDLSKKAAAAAAAAAAAVAASAVKTEQPKDFYSATNQLLLTQALLKANAQQPSSLESYYASQAHMLYRNFSLPLPPYLFGPHLFGQDFIKQDRLQKELVRGLQTSGGSLVEPGFPTYPQPAVRNPEPNDFTSLSKLPSKSPSEKPPASQNSSVKMVIKNGVLIPKQKQRRYRTERPFTCEFCTARFTLRSNMERHVKQQHPQHWSQRPRGGHSTRGRPPANPPTLLHHLNQNQQSYAGLLPSQSLSQDYGKHAISDQVKYAILAQQLKGNKADDNESDEDLVIDEEKHAEAKEPSERTLSLLRGKLEANIESKANDEVKDETKKELDCFDKEDEEPVKMEICPDFKEEHLMGEDLASVSEIVDNASQNYPQFHSRYMSDEEGLVASTSDCNQSGSDEKSDSMNSGNSGHSSTSKKKKKMKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNSINKIRRTRSTSSPEIQESPPVNHVPTQQQQQQQLQQQEQQQQQEQEQLQQQQPQQQQQQNSNSQFTIRNVPERPYKCNQCPSSTFSTKSNLKKHRSAKHGQYIKSRPESPLSEPQHSPQECPNPQQQDCPQEETKSNNDQSGYESQSSGVSEPTPMDISKTSSNDASRSRRNSPISSPVPNPTNAINNNNTESPFKCHLCDSGFAERQDCLEHIKDNHEQSYEMLVAKGALDMDIDSLEEQMPPAPPPPQPSDGEERRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCRRRFTLKHSMLRHRKKHGCADSSMYVGTSGDEDNNTPPTLMSQQPAPSAPLQDRASLPQVASVATGDAAPSLAMRFNLGKLSAGMSPIHVDANDNTDNTDLISNLLGIRDKSIIDRALQSSIDDAAKLIGIKGNHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00734946;
90% Identity: -
80% Identity: -