Basic Information

Gene Symbol
ZFX
Assembly
GCA_030064505.1
Location
JAOPFQ010000004.1:20463851-20468698[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.7 1.3e+02 3.2 0.1 3 23 95 115 94 115 0.94
2 15 1 84 3.8 2.6 1 20 1039 1058 1039 1062 0.76
3 15 0.00047 0.038 14.4 2.3 3 23 1143 1164 1141 1164 0.96
4 15 0.001 0.083 13.3 0.3 2 23 1177 1198 1176 1198 0.97
5 15 1.8e-05 0.0014 18.8 2.3 2 23 1201 1222 1200 1222 0.97
6 15 0.007 0.56 10.7 0.9 1 23 1228 1250 1228 1250 0.96
7 15 2.5e-05 0.002 18.4 4.5 2 23 1257 1278 1256 1279 0.95
8 15 0.11 8.9 6.9 3.7 5 23 1292 1310 1291 1310 0.97
9 15 2.3e-05 0.0018 18.5 1.5 3 23 1317 1338 1316 1338 0.97
10 15 0.0063 0.5 10.8 0.3 2 23 1354 1374 1353 1374 0.97
11 15 4.8e-05 0.0038 17.5 0.5 1 20 1380 1399 1380 1402 0.92
12 15 0.00016 0.013 15.8 3.7 1 23 1410 1432 1410 1432 0.99
13 15 0.0024 0.19 12.2 3.2 1 23 1438 1460 1438 1460 0.97
14 15 4.5e-06 0.00036 20.7 2.8 1 23 1466 1488 1466 1488 0.99
15 15 0.0021 0.16 12.4 8.2 1 23 1494 1516 1494 1517 0.95

Sequence Information

Coding Sequence
ATGGATCTGAGCACAGCGGCAAACAATAGCAGCAACTCGGTTACTGTCGCGGCAGCGCcgagcaacagcagcggcagcggcagcggcagcggcagcggcagcggtagcggcagcggcagcggcagcggtAGCGgtagcggcagcggcagcggcagcggtagcggcagcagcagcagcagcagaagtagcagcagcagcagcagcagcagcagcagtattagcagcagcagcagtagtagtaatagtagtacaACTAGCAGCAACGGCGATTCGGCGGTGGCATGTCCAGTATGTACGCTATATCTCCGAGAGGGTATCAGCCTGCAAAAGCACTTGGATACACATCCAAAGGAGCAAGTGATCGAGGCGTTGATCCGCGCCAGTGGAAGCGGTGGAGCTCCTGGTGGAGTTTCGGCGCTCGTCGGTCAGCCACCACCGGCATTAACCCCTTCGCCCGTACCTACACCCACCACCCAACCTCCAGCTGCCTCGCCGAGTCGCCACGTTCCTCATGCACCTTCGCCTTTCCCCATCGGACCTATTTATCACGAGTGTCCACCCCTCAACGCCATGATTCCGCCGGCTCAGTTCGCCTCTTTCAGCTACCAACAGTTCGTTAATAATGGTACAATGATGATACCCGCTCAGTACGCGATGGCACAGGCGCAACCTCAACAAGCAAGCCAAATGATGCAGATGTTGTACAATCCCTATGGGATGTATCACCAGCAGCAAATACCTACAGTGCAAATGATCTCAGCACCTACGATGATGCCCACGTCGACGTCGACGCTGCCTACGACGGTACCTTCAGTGACGACGCGAATAAGGCCAAGCGCCTCGAGTACGAGTAACGTGACAATTACTCCCGTGAGTGAGACGACAATGACAACCTTGCCACTTCCGGCACCACCAACGTCGGCATCGAGACCACCGAGCGTGCAGTCGCAGTCACACTCGCAGCAACAGCCGCAACAACAGCCCCTGGCCGCTGAGTCAGCCAAACAGTTGATCGTCCAGGAGATCACTCCGGGACCTGATCATAATCTCCCCGACGTGGAATCCGTGTTACCGGAACCACACGAAGTTGAGGAGACTCATAGAAATTTGACTCAACAACTCAGAGATCAACAAAATGAATGTGCACGAAGAGAACAGCAAAATGACGTCGAAATGTATCACAGGGCGGATCCATCTACGTCACTCAGCAATGATACATCCGTTAATGGCAAGACTAACAGGATTCTAGTCGATATCGAAGACGACGGTGAAATTGAATCGCTTACCGTGAGAGATAGCGACAAAACACAAAACCATGAAAGTAACGCCATCGATACTACTGAATTTATGGAGGCTTCTATTGAGTCACCgacggaaaaaataattaccgaAACCATTCAATCCGACCACGAGGAATACGATCAACAAAATCAAAGCAAAACTAGAGATACTATACAGGCAGTTGTTCAAGCTCGTGAACTTATTAATATTCCCGATAAGGAAGTTCAAATTTCCAGTTCAAACAGGCAGGAAACAGAAAACTTGAACGAGTTGCTAGTCAACATGGAGTCCGATTTTGACAACGTAGAGTTATCTAGTAAATACGAGGATGAATGTATAGAAAAGACGCATCGTGAAGTGCATGATGGTTTAATAGATGCTCTAGTAGAACCGATGGAAAAACATGTTGACGAAGATGAGAATACAAGCATTTCTTATCAGAAAATTACTTCAGAGCAGattgaatgtaaaattattgtcgCTCATGACGAATCTGATGTTTCCTCGGTTTCTTCGTCGGATTGCTCTGAAGGCAACTTAGAAATTCGCAAGATTGATCAATCGTCGtatcatttcaaattattacattctCGATCGGCGCCTACTTCTCCGGTGTCAAAAACAACGTTTCACCATCGTTCTTCTTCGCGTACGTCCATGATATCATATCCAGTTGGTTTTGAAGCTACTTGGTTACGAGATTGCCTTAAAGATAACTACAGCGATGCTGATATGGAATTGGAGGAACCTCATCCTCATGCTTTTCTGAAGCAAAACGATAATATGACTGACAAGCCAAAAGATCTGTCCACCGGCGTAGATAGTATGAAAGCACGACGCAGTCGAGTACAAGGTTCTCCTGTATCTGTACACTCTACTTCTACTTATTGCCTAATAGAAGATGACGAAGAAGACTCGGATATAGATAGTTGTGGTAGCAAAGAAGACGACGAAGaggacgaggaggaggaggatgacgacgacgagccACTGTTAATGGAAGCTACGTCGCATCGAACTGACGAAGATGATCGTGATAAGAAAGTGGTTCACAGGGAAGAGTGTAAATCCATGTTGAGTATTGATATGAATAGACAGCAAGATCAATCTATTGACTTTCGATCTCAGAGCATCATGACTGACAATTACTCGGCTGCTCAATTCCCACTTAACTTGGGTCCTACGTCCCAGCAGCATCAACCTAGTGTAGCATTGCATCATGAAACTTATCCACTGTCTAACAGTGGGACCTCGCATAACATATTAAACATATCTGAAAGTGCCGATCCGACAACCAGTACAGATTCCAAAAGTTGCTCTAGCTCACATAAATCCACTATGCAAAAACCTTCGACAGAGTTGCTGAATATCAATGAAGATGCTCACGCAGGGCCTATGAACGTTTTTGAGTTCGACGGGCTGCAGATACTTGTACCTAGTACGTTTATTAGTGAATCGTCGCAAAAAGCAGTAAGCGGTACTAGTCAACAGTCGATGTCATGCAGCGAAACCGGAGCTGGCAACGACGAGGAAGTTAAAAGTGTGAGCATGCGTGCGGACGAGACGATGCCTCCGAGAGGTGAATTATCGGAGCAAGAAAGCAATGGCTGTACCGAGCAGTCAGCTTGGCAGctctACATGGGCCAAGAATCCTCACGCATGTCAGCATCCTATGACCTCATGGCGCGCGAGAGTTGGGAAGAATCGGAAGGTTCGGATCACGAAGGACATAATGCTGGTCCACTGCTTGACAGTCGTTCTCTTGCAACGCATTTCACATCTAGCCTCTTTCTTGATCGAGACCGCGACCGTAAAACACCAACCCGCCAGGTCTTTAAGTGCTCGCACTGTCCAGAGGTGTTTGAGTGTCCCAAAGAACGTCGAGTACACAGCACCATGGTGCACAAGGAGGCGGGCCCATCTACCAGTAACGATAACATGGATCACCCGGAGCTAAAAGAAATGAAGATACTCGATACAAGCCGTACCAATGTGTTCGATGAACTCTTCGTTCCTGGTCTGCACGCACAGCAGATGTATCAGCAACCGTTATTACACCAAATGCAGCCACCACAACAGAGTGCTGCCAAAGCAGACGGTGACGCGAAGATGGATGGCTTACACATACCGACTATGGAAGTTATCTGCAGTTTGTGCAATCAACGATTCACTAGCGAGAAATCTTTGCAAATTCATCATAGGCGTATGCACGATGCCGACACTTCTAAGCGCGTCCGCGAAACTACCAAGTGTCAGATTTGTAACGAAGAGTTCACGTCCGTGGCCAGCTACAATCTCCATTTGAAAATCCATCCCTTGGAGTGTGGCCAATGCGGCAAGTACTTCTACCGCAAACAGAACTTTAAATTGCATATGAAGCGTCATTTGGGCATCAAGCCCTTCCAGTGTACCATGTGCGACAAAGCCTTCCTCACCAAACAAAAGCTCGACGAGCACACCAACGGACACACTGGCAATGCTCCCGTCAAATGCAATCTCTGCAACGAGACCTTCAGACGCTATTCGAATCTCACGCAGCACAAGAATCGTCaccatttaaatataaaaaagaagctcAAGGATTACATATGTCATTGCGGAGAGGTGTTCCACACGAAAAAGAAGCTAGCTTGGCACAAAGAGACCCACGATGACAAACCGAAAGCGTGTACCTACTGCAACGAGCGATTCATCCACATGGCGAGCCTGACGCGTCACATGCGACGGGCACATAATCGGCGGTTCGTGCCCGATGCCCAGCGGGACAACGAGAACGTCGAATGCCCGATCTGCAAGTGCATTTACCTTAAATCATCCTTAGCCGTGCACATGCGAGTTCACAACGGTGAGAAGCCGTACGAGTGCCAACTCTGTCCCAAAGCATTCAGTACCAAGTGGAACCTGCAACTGCACAAGTGGACTCACGCGAATCGCAGCGCCAAGCCTTTCAAATGTAATCAGTGTAACTCGGCTTTCTATCGCCATAGCGACTACACCGCTCACATGAATTCGCATAGGAACGTTCGACCGTATACCTGTAACTATTGTGGGGCACAATTCATCAGAAAGTACAACTGTTTGCGACACGTGAAAGAACACGAGGAAACCAAGGCATATACATGCGACGTGTGCAACAAAGCTTTCCATAGGTCGTATTATTTGAAGGAGCACCTTCGCGTACACTCGGGACAGAGGCCTCACGTTTGTCATATCTGTGGCAAATCCAGTAGCACAAAGTCCAATCATAATAAACACGTAAGAATTCACCATGCACGCGAGCCTGTTAATACTGAAAACTAA
Protein Sequence
MDLSTAANNSSNSVTVAAAPSNSSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSSSSSRSSSSSSSSSSSISSSSSSSNSSTTSSNGDSAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASGSGGAPGGVSALVGQPPPALTPSPVPTPTTQPPAASPSRHVPHAPSPFPIGPIYHECPPLNAMIPPAQFASFSYQQFVNNGTMMIPAQYAMAQAQPQQASQMMQMLYNPYGMYHQQQIPTVQMISAPTMMPTSTSTLPTTVPSVTTRIRPSASSTSNVTITPVSETTMTTLPLPAPPTSASRPPSVQSQSHSQQQPQQQPLAAESAKQLIVQEITPGPDHNLPDVESVLPEPHEVEETHRNLTQQLRDQQNECARREQQNDVEMYHRADPSTSLSNDTSVNGKTNRILVDIEDDGEIESLTVRDSDKTQNHESNAIDTTEFMEASIESPTEKIITETIQSDHEEYDQQNQSKTRDTIQAVVQARELINIPDKEVQISSSNRQETENLNELLVNMESDFDNVELSSKYEDECIEKTHREVHDGLIDALVEPMEKHVDEDENTSISYQKITSEQIECKIIVAHDESDVSSVSSSDCSEGNLEIRKIDQSSYHFKLLHSRSAPTSPVSKTTFHHRSSSRTSMISYPVGFEATWLRDCLKDNYSDADMELEEPHPHAFLKQNDNMTDKPKDLSTGVDSMKARRSRVQGSPVSVHSTSTYCLIEDDEEDSDIDSCGSKEDDEEDEEEEDDDDEPLLMEATSHRTDEDDRDKKVVHREECKSMLSIDMNRQQDQSIDFRSQSIMTDNYSAAQFPLNLGPTSQQHQPSVALHHETYPLSNSGTSHNILNISESADPTTSTDSKSCSSSHKSTMQKPSTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSCSETGAGNDEEVKSVSMRADETMPPRGELSEQESNGCTEQSAWQLYMGQESSRMSASYDLMARESWEESEGSDHEGHNAGPLLDSRSLATHFTSSLFLDRDRDRKTPTRQVFKCSHCPEVFECPKERRVHSTMVHKEAGPSTSNDNMDHPELKEMKILDTSRTNVFDELFVPGLHAQQMYQQPLLHQMQPPQQSAAKADGDAKMDGLHIPTMEVICSLCNQRFTSEKSLQIHHRRMHDADTSKRVRETTKCQICNEEFTSVASYNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFQCTMCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDDKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRDNENVECPICKCIYLKSSLAVHMRVHNGEKPYECQLCPKAFSTKWNLQLHKWTHANRSAKPFKCNQCNSAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEETKAYTCDVCNKAFHRSYYLKEHLRVHSGQRPHVCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00734928;
90% Identity
-
80% Identity
-