Ccun000551.1
Basic Information
- Insect
- Chouioia cunea
- Gene Symbol
- ZNF217
- Assembly
- GCA_030064505.1
- Location
- JAOPFQ010000001.1:5821522-5827282[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 5.4 4.3e+02 1.6 3.3 1 23 298 321 296 321 0.64 2 20 0.15 12 6.5 0.1 5 23 348 367 337 367 0.92 3 20 2.5 2e+02 2.7 0.3 3 23 375 395 373 395 0.95 4 20 4.2 3.4e+02 1.9 0.2 1 14 401 414 401 417 0.84 5 20 0.0052 0.42 11.1 0.4 1 23 425 448 425 448 0.98 6 20 3.6e-05 0.0029 17.9 4.3 1 23 458 480 458 480 0.98 7 20 0.33 26 5.4 3.5 1 23 512 536 512 536 0.97 8 20 1.8e-05 0.0014 18.8 0.6 3 23 544 565 542 565 0.95 9 20 0.0014 0.11 12.9 0.7 1 23 571 593 571 593 0.97 10 20 7.1e-08 5.7e-06 26.4 0.1 1 23 599 621 599 621 0.98 11 20 0.68 54 4.4 4.7 1 23 627 650 627 650 0.81 12 20 0.00011 0.009 16.3 0.6 1 23 656 678 656 678 0.97 13 20 0.00023 0.018 15.4 0.4 1 23 685 708 685 708 0.98 14 20 1.3e-05 0.001 19.3 0.8 2 23 838 859 837 859 0.97 15 20 0.00079 0.063 13.7 4.1 1 23 865 888 865 888 0.96 16 20 0.00016 0.013 15.8 1.6 1 23 894 916 894 916 0.96 17 20 2.4e-06 0.00019 21.6 0.5 1 23 922 944 922 944 0.97 18 20 0.003 0.24 11.8 1.7 1 23 950 972 950 972 0.97 19 20 1.1e-05 0.00089 19.5 1.5 1 23 978 1000 978 1000 0.97 20 20 0.00022 0.018 15.4 3.6 1 23 1006 1029 1006 1029 0.98
Sequence Information
- Coding Sequence
- ATGGAGAGAATTCATCCAGGGAATATACAAGTGGTGGTAAACAACGTAAACAGCAATGAGATATTGCTTCAGGATGCTAAAGGAATCAATCCAAAAGAACAAGACCTCAAAACAACAGAATACTTTTTAGAAGTACAAGGGCAGGATACCAATGTTGTCGTTCACCAAGCTCAATTTGTAACGATAGGGAACGAATGCGGGGAAGTTCAGGATGGGGAGTCGCAATATTTACCACTGGAAATGGACGATAATGgccaaataattttacaagacAAACACGTGATCGTGTGGGACGAGCTGTGTAGGATCTGTGCCAATAGTAGCGATAAAATAGTTCCAATATTTTCCGACGAAGGATTGAAGCATAACTTGtgcataaaaattcaaaattatttatcattggACATTACCGAGCACGATTCTCTCCCGCTTCAAGTGTGTTACAATTGCGCAGCAACCTTGTTGGCTTGGCACGAGATGATAGCAAATTGTTCGAACGCTCAGCAACGTCTCCTAGATCTACAGAATAAATTACATTCGAAAAATCAGTTGCAAAACAACATTAGCGACGCTATAGAGGTGGGATTCGCCGACAACGGAACGGAATTGGAAGTGTACAGCAATCAAGAAAATCAAATGCAGGTTGGAGCTGACGAGGAATTTGCAACGCAGACCGCGCAGCCTCCCAACGAGCCAGAAACTGACAGATGCGTACTGGAAGACGCGGTGGTGATCGAGGTGACGAGCAGTAGCGATCGTGCGAGAAAAGCCAAGGCGAGGGCTCCAAAAAGAGCCGGCAAGAGCGCCCAGGTCAAAGCCAAGGATTCTAGAAGCGGCGTCGAGCGATCGAACGGAGAGCACTCCGAGGTTCTGATAAACGGAGTGAGGTGCTATCGTTGCTCGGAGTGCTCTCGATTGAGCTCGACGCTCTACGCTCACACGGCTCACTCGAGATCGGCTCACGCGAGATCGAAAAAGAGCGGATCGACGTTGACGAAGCGAAAGTGGCGTTGCGAGTACGAGGTCGACGGGAAAGGGCGCAAGTGTGGCAAACTGTTCGTAGCGGCATCCTCGATCAAGAGGCACGTGCGCGAGGTGCACTTGAAGCTCAAGCAATGGGACTGCAGCTACTGCGCGCGCAAGCTCGCGACGAGAGAGTCTCGCGACGAGCACGAGCGTAGCCACACCGACGAGCGACCGTTCGAGTGCGAAGCTTGCGGGAAAAGAGTCGAGCACAGTCGACAGCAGCAGGACCAGCCGGAAACCATCAAATTCACCTGCGGCTTGTGCGTAAAACCGTTCTTGAACAAGAAAGACCTGTTGTTGCACATGGAGACGTATCACTGGGACGAAACGGATTTGAGCAGCCGCTTCGAGTGCAACACCTGCCACAAATCCTACTTCGACAAGTCCAAGTTGGAGACGCATCTGCGTCTCCACGACCGCAGCCAGTATAAGAAGAGCGAGCGTTTCGACGAGAAGAGAGTGGCCGACCACGCCAAAACGTACTGCGCTACAACCCAAAAGATACTTTACGTATGCCACTTTGAGCAATGCAAGTCTCTGCTGAAGTCTCGACGAAACTTTCTCAGGCACTTGCGCGTTCACGTGGACGAGCGACCGGTCATCTGCGAGCGTTGCGGCAAGTGCTACCGCAACGTGGACGACCTCAGACGGCACATCGAGTCGGTGCACGACAAAGTTAAGCGACACGAATGCGACATTTGCGGCCGGTTCTATGCGAGCAAAGGAACCCGCGACGCTCATCGCCGCATCCACACCCAGGAGAAACCGTACCCTTGTGGCGATTGCGGTAAGCCATTCCGTTCGCTCAGTCTGTTAAACGCACATCAAAGAGTCCACAAGGATGTTCGGCCTTTCAAGTGTTCCTACTGCCCGATGGCCTTTCGCGAGAGACAGAAGTGCCAGCACCACGAGTCCTCCATTCATACCAACGAGAAGCCCTACTCGTGCGACAAATGCGATCGCCTGTTCTCCGCCAAGGGCGAGCTCAATCGGCATCGCACCGTCCATTTTCCAGAGCACAAGCCCTACGTCTGCGCCGAATGCAAAATGGGATTCAGGCTTAGCCGCTACCTGCGCGCCCACATCAAACGCGATCACGCCAACAAAGCCGAAGTCATGCTGCACAACAAGCTCTCGCGTGACTCATCTAGTACAGTCCGAAGTAGTGCCGCTGGCAGTTTCAAAGATTTTCGAAAACGTTACAAGCCTAGGGTGTCGAGCAACGCTCATCAAAGCTCGGCGAAAGCTCGAACAAAAGCGATTAGCAGCAGAGCCTCTAGTAGAGTCGCTAAAGACGAGGCCAAGGTGTCGAAGGAGCAACAATCGAGGCAAGACGATGAGCTATTAGCAgtgaaaaaggaagaaaaatccGACGACGACTTTGAGGTCGAAATCAAAGAGGAGGAAACCGCGACCACGATATCGTCGTCTTCGACCACTAAAAGATCGCGAAGGAAGCAAAAGCTTGCAAGCCCCAAGAACCTCGAGTGCAAGCAGTGTGGAAAAGCTTTCCGGCTCAGCAAAAGCTACGAGATCCATATGCGTCAGCACACTGGTGAAAAGCCGTTCACTTGTCATATTTGCGGCAAGCAGTTTGGCCAAACGGGCAGTCTTTACTATCATCTCAAACACTTGCACGGCGGTGTCAAAAATCACGCTTGCGATATTTGTGGCCGATGCTTTGCCATGAAAACTGCCATGGAGGATCATCGTAGAATCCATACTGGGGAGCGACCTTACATTTGCGATGTTTGCGGCAAGACCTTCAAAACTAAGGCCTCGCTCTATATACACAGTAAAATACACACGGACGAATACCCCTTTAATTGCTCGTATTGCAATAAACCGTTCAGATGGAAACAGCAAATGATTAGCCATCTGACCACTCACACCGGAGAAAAGAATCACATATGCGAAATTTGCAATAAAGGCTTTGGCGTCAAAAACGAGCTCACGAGACACCGACGTACTCATTCCACCGACAAACCGTTCACTTGCCAGAAATGCAATCTCAGTTTTGGACAGAAGAGATATCTTACTAATCACAATCGAACTAGGCACAAAATCAAACCACTCAATGccacttaa
- Protein Sequence
- MERIHPGNIQVVVNNVNSNEILLQDAKGINPKEQDLKTTEYFLEVQGQDTNVVVHQAQFVTIGNECGEVQDGESQYLPLEMDDNGQIILQDKHVIVWDELCRICANSSDKIVPIFSDEGLKHNLCIKIQNYLSLDITEHDSLPLQVCYNCAATLLAWHEMIANCSNAQQRLLDLQNKLHSKNQLQNNISDAIEVGFADNGTELEVYSNQENQMQVGADEEFATQTAQPPNEPETDRCVLEDAVVIEVTSSSDRARKAKARAPKRAGKSAQVKAKDSRSGVERSNGEHSEVLINGVRCYRCSECSRLSSTLYAHTAHSRSAHARSKKSGSTLTKRKWRCEYEVDGKGRKCGKLFVAASSIKRHVREVHLKLKQWDCSYCARKLATRESRDEHERSHTDERPFECEACGKRVEHSRQQQDQPETIKFTCGLCVKPFLNKKDLLLHMETYHWDETDLSSRFECNTCHKSYFDKSKLETHLRLHDRSQYKKSERFDEKRVADHAKTYCATTQKILYVCHFEQCKSLLKSRRNFLRHLRVHVDERPVICERCGKCYRNVDDLRRHIESVHDKVKRHECDICGRFYASKGTRDAHRRIHTQEKPYPCGDCGKPFRSLSLLNAHQRVHKDVRPFKCSYCPMAFRERQKCQHHESSIHTNEKPYSCDKCDRLFSAKGELNRHRTVHFPEHKPYVCAECKMGFRLSRYLRAHIKRDHANKAEVMLHNKLSRDSSSTVRSSAAGSFKDFRKRYKPRVSSNAHQSSAKARTKAISSRASSRVAKDEAKVSKEQQSRQDDELLAVKKEEKSDDDFEVEIKEEETATTISSSSTTKRSRRKQKLASPKNLECKQCGKAFRLSKSYEIHMRQHTGEKPFTCHICGKQFGQTGSLYYHLKHLHGGVKNHACDICGRCFAMKTAMEDHRRIHTGERPYICDVCGKTFKTKASLYIHSKIHTDEYPFNCSYCNKPFRWKQQMISHLTTHTGEKNHICEICNKGFGVKNELTRHRRTHSTDKPFTCQKCNLSFGQKRYLTNHNRTRHKIKPLNAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -