Ccun007828.1
Basic Information
- Insect
- Chouioia cunea
- Gene Symbol
- Polr2D
- Assembly
- GCA_030064505.1
- Location
- JAOPFQ010000003.1:18928692-18934013[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.18 1.1e+02 3.0 0.0 19 31 18 30 16 34 0.84 2 3 2.4e-12 1.4e-09 37.8 0.0 4 45 105 147 103 148 0.96 3 3 5.2 3.1e+03 -1.7 0.1 5 17 346 358 346 360 0.82
Sequence Information
- Coding Sequence
- ATGGCGAATTTAAATACTGACACAGTAGAAGAGGATGCTGCAGATTTACAATTTCCTAAAGACTGGACATCAATTAGCAAGCATTATAAGAAACTTGAGATGCCAGTCAGGAGAGAAGAAATTTTTACTTTGGATTCTCATTGTTGCATGTGTAAATGTATCATCATTGAACCATACATCCGATGTGCCATTTGCGACTATATTCTGTTATGTGCTGTTTGTTTTGCCAATGGCAAAGAAAAATTCGGACATCAAAATGATCATGATTACatgattattcaaaatgagTTCCCATTAATCAAAGGTTCTGGCTGGGCAGCcaaagaagtaaaaaatttacttaGTGTATTACATGAGTATGGTTTTGGAAATTGGGATGATATATCCAAAAGATTGCCAGGAAAATCAGCAATAGAATGCAAAAGATATTATATacagtattttataaacagCCAATCGTTGCCTAATTTACCAGAATTTAATGAATCTAATACTAGTATTTATGACCTTAAACCATTaccttttatatttaaattagaaaatattgaaagtcTATCTAGATTTGTACCTGGCACCATTAATCATAAGATTATGGGAGGGTATAATGCACCTAGATCAGACTTTGAAGTAAATTTTGATAATCATGCTGAACTAGAAGTATCAAAGTTgaagtataataattttattaataaagatcAGTATTGTGATTTAGGTCAATCCTTGCAAATTGCTATATTTCAAGCGTACAATATGAGATTAAAAGAAAGAGTTCGTAGAAGACAAATAATAAGAAGCCATGGCTTAATATCTACAAGAAAAATGGTATCATGTTTGTTAAGATATGATTATACAGTAACAAGACCTCTTGCTGAAAGAATGAGAATTTTTAGTCAAGTTTTAGTTGGGATAGAATTTGATTCTGTGATGGAATGCTTGCATCACATTGGAGAGTTGAAAAACcAATTTGAAAATGCCGATACACTTTTAATTTCTGAAGTACATATGTTATTGGAACATCGAAAGGCGCAAAATGAATCGGCTGAAGAAGAGCAAGAATTTTCTGAAGTGTTTATGAAAAGTTTAACATATACAAACcgttttagaaaatttaaaaacaaagaaactaTTGCTGCTGTTAGGAACTTACTAAGCCAAAAAAAGTTGCACAAATTTGAGTTAGCTTCCCTCGCCAATCTCTGTCCAGAAACTCCAGAAGAAGCGAAAGCTCTAATACCTAGTTTGGAAGGTCGTTTGGAAGATGAAGAATTAAGAACAATATTGGATgatatacaaacaaaaagatcACTTCAATACTAA
- Protein Sequence
- MANLNTDTVEEDAADLQFPKDWTSISKHYKKLEMPVRREEIFTLDSHCCMCKCIIIEPYIRCAICDYILLCAVCFANGKEKFGHQNDHDYMIIQNEFPLIKGSGWAAKEVKNLLSVLHEYGFGNWDDISKRLPGKSAIECKRYYIQYFINSQSLPNLPEFNESNTSIYDLKPLPFIFKLENIESLSRFVPGTINHKIMGGYNAPRSDFEVNFDNHAELEVSKLKYNNFINKDQYCDLGQSLQIAIFQAYNMRLKERVRRRQIIRSHGLISTRKMVSCLLRYDYTVTRPLAERMRIFSQVLVGIEFDSVMECLHHIGELKNQFENADTLLISEVHMLLEHRKAQNESAEEEQEFSEVFMKSLTYTNRFRKFKNKETIAAVRNLLSQKKLHKFELASLANLCPETPEEAKALIPSLEGRLEDEELRTILDDIQTKRSLQY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -