Ccun005142.1
Basic Information
- Insect
- Chouioia cunea
- Gene Symbol
- osa
- Assembly
- GCA_030064505.1
- Location
- JAOPFQ010000002.1:20675801-20724926[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-25 2.4e-22 79.0 0.0 2 89 75 162 74 162 0.92
Sequence Information
- Coding Sequence
- ATGAGTTATCACAATCATCCCGCAACTCCTCCAAGTACGATTCCATCCCCTGGTGCTGGAAGTATTAATTCTATTCACGAAGATTATTCTgatataaatagtccaggaTGGCCCCGAACACCAGCAAGTCCtgTTTATAACAGTCAATTATCTCACGATCCATATAGATCTAAGAAATCCGATAGTTTATCAAAACTCTATGAAATGGATGATTCCGTAGAAAGAAGATCTTGGCTTGATAAGCTTGTTAGTTTCATGGAAGAAAGGAGAACGCCGATAACAAGTTGTCCTACAATTTCTAAAAATCCTTTAGATTTATTCAGACTATATATCTACGTCAAGGAAAGAGGGGGCTTCATGGAGGTATGCAAGgttactaaaaataaaacttggaaAGATATTGCTGGTCTTCTAGGTATTGGTGCCAGTAGTAGTGCAGCATATACTTTGAGAAAACATTATACTAAGCACTTACTTGCATATGAATGTCATTTTGATCGTGGTGGCGTTGATCCACAACcaataataaatcaagtaGAAGCCGGTTCAAAAAAAAAGGGTACCAAAGGAACATCATCCGTACCATCTCCTGGTTCTTCAAATTCCCAAGATTCTTTTCCACCAGGCACttcaaataattcatcaaTCGAAAGTTACGGCAACTATCAAAATTCTTATTCAACCAATACCGTTACTGGATCAAATGCTGAATTCAGTTCTACCCCAATACGTCCACCAAATCAGGGTAATACAACGTCTCATCAAGTTGGAGTTCAACAAGGAACTTATCAGAATTCTGGTCCGTTTCAATCGTATGCACAAGATCAGTATATGCGGCAAAGTAATACTGTTACGCAGGCCAATGAATTTCAGTCTTATAGTAGTCGTTCGCATTATCCTCCTTATGCTGGTGATGCTGATAGAAATTATGCTGGAAATAATCTAGTTGGAACAAATTCTGGCAACCAAGAACTGTATGGTAGATATGGTGGGAATTCACAAGCTAGTTCTTATTCTAATCAGGCATCTCCCGGATCACGAACTTATCCTCCTGTATCGCAAGgacattcaaataatttacaacAGTCTACAACCACTCAGCAAACTGCCCAATCCCAATCGACTTCTGGGACGACGTATTCTTGTACTCAGGAATTTTACAGACAAGATCAGAATGCATATGGTTCAACGATCGGAAATCAACTTTATCCAGGgacaaatagtaaaaatatgcCACCACCTCCATCGTCATCACAACAACCACGTCGACACCCTGACTTTACAAAAGATCCACAGTATACATCTTACAATCAACAAAGACCAACTTATGCagGGTCAGTTCTCAGTATACTGTGCATGGGTGATATCACATGTACCCTCATCCCTTGTTATTATCGAGTAGTGTTCTGCCTAAATAGAAGCAGCTCTGTACGTTTTCCAGAAGGTCACCTACAACGTGGCTTCAAAGCCCTTCAACTATATGGGGGCAAGATGTATACCATTCTCGAGCCGTCGAGGTCGTCTGTTACTCGAGATGATCTTCCTCATCTGTTTTTTTGA
- Protein Sequence
- MSYHNHPATPPSTIPSPGAGSINSIHEDYSDINSPGWPRTPASPVYNSQLSHDPYRSKKSDSLSKLYEMDDSVERRSWLDKLVSFMEERRTPITSCPTISKNPLDLFRLYIYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKKKGTKGTSSVPSPGSSNSQDSFPPGTSNNSSIESYGNYQNSYSTNTVTGSNAEFSSTPIRPPNQGNTTSHQVGVQQGTYQNSGPFQSYAQDQYMRQSNTVTQANEFQSYSSRSHYPPYAGDADRNYAGNNLVGTNSGNQELYGRYGGNSQASSYSNQASPGSRTYPPVSQGHSNNLQQSTTTQQTAQSQSTSGTTYSCTQEFYRQDQNAYGSTIGNQLYPGTNSKNMPPPPSSSQQPRRHPDFTKDPQYTSYNQQRPTYAGSVLSILCMGDITCTLIPCYYRVVFCLNRSSSVRFPEGHLQRGFKALQLYGGKMYTILEPSRSSVTRDDLPHLFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -