Cros003692.1
Basic Information
- Insect
- Choristoneura rosaceana
- Gene Symbol
- pnr
- Assembly
- GCA_037349165.1
- Location
- JAZBNJ010000006.1:20198504-20203596[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-16 4.6e-13 49.5 3.3 1 35 470 503 470 504 0.97 2 2 9.4e-18 3.3e-14 53.1 7.5 1 35 531 564 531 565 0.97
Sequence Information
- Coding Sequence
- ATGGAGACCGAAGTGAATGCCGCCGGAGGTAACAACGAGGACCAGCAGGAACTACAAGCTGCGGCTGAAGCTCTGCAACTAGTCAAGCACGAAGAGCGCTTAGAGCAAGACCGCGCCGCGGACAAAAATGGGGGCGCTACCTCTGAACCACCGGTCCCAAATCAACAGGACACTCCGCAGCCTCAATCGGTAATCACTTCTCGGCGCGCCGTGCGCACTATCACTACCGCTGGCCATATCACCACCGACGATGCGGAAATCAATCCTGAAGATGGTGTTAAAGATGAGCCACCTGAACCACCACCACTAGAACATGAGCAAAATGCACAAATGCACCAATATGCACCAAAGCTGGAAGAGAACGAAGCGCGAAACTTAGCTCAACAACATTATGATGAAGAAAGATTGCGCTTAGTAGAAGCAGAAACGGCTCGATACTTAGCTTTTAAACAAGAACCTTATAGGACATTGCCATCTCCAGTAACGGACAAACGTATGCAAGTACAATACTCTCGTGCCCCACAACGCCCCGCATATAGCAGCAGACCTTTGTCTTTACGGTACGGTGCACCACATCACGTCATTGTAGCTCAAGACGGCGATCCAGAGGATCACGGACACGATTCTTTTCTTGGAGCAAAAGACAAACCCGAGCAATTACAATATGCTCAAAACGATGATATTGGTGCGCCCGGAACCAGTGATGGCAGACAATATGGGGCAGTTCTAAGCGACCAAGTATCCGCGTCATCATCACTCGAAATGATCCAAACTACTTCTTTAAATAGCCAACAAGCAGTAGGAGTTGCATACCAACAGGTCAAATATGAGACCAGGGGTGAAAGTGAATTAAGGCCAACAACGTATGCCAGTCTGCAACCGGTGACGTCTGTACACGGAGGGTATGCATATGCAGGGCAGAGCCCACAATATGGTGGGGCTGGAGGGTACAGTGCATATGGCGGTGGGGGAAAAGAGCTTCTGACACTGTATGGGGGCGCAGCAGGTGCTGCAGCTTCAGGAACAAGAGGAGACGAGTCCCCACCTAGCCAACTTCTTTACCGGAGTGATCCTACTCTGTCATCTTCATCCCTAACGACGCGCGGAGCACATGTCGTGTATGGATCTGTTGTGCCGCCATCACAGACTGTCTACGAAGCGCCAGCGAGTCCTAATTCTCAGCAgGTAACTCTATATACGCATGGGAATGCTGTGCAATATAAAGTTGCCGGAGAACACTACCTTGGCCAAGGCGGTGGCGTGGAGTACGTACCGGTGTCGGGATACGAGGGCAGCCTACTGGTAGAAGGATACGCGGCCCAGGCACAACCCTGGCCCGCTCACAACATGCTTCCTATTGACGACGGTTTTGACCCCAGTATGGCTGGCATGGGAGAAGTCAAAGAATGTGTAAACTGCGCCGCGGCAACGACTCCACTTTGGCGACGCGACGGCACTGGCCACTACCTGTGCAATGCTTGTGGCCTTTACACACGCATAAATGGCGTCAACCGACCGCCGCTCAAAGGACAGAAAGCTAAACCACAACAAGCACTGCCGACGAACGGCAATAGGCGCGTTGGCGTCACCTGCGCCAACTGTCGCACCTCCAACACCACGCTGTGGCGGCGCAACAACAACGGTGAGCCCGTCTGTAATGCATGTGGCCTCTACTACAAACTACACAACGTGAATCGTCCACTAAGTATGAAGAAAGACGGCATCCAGACCCGCAAGCGCAAGCCGAAGAGCATGGGCGGCGGTGCGCACAGCGTGTCGCGCCCCGGGCCGGGCGCGCTCCCTGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGGCGGGCGCGCCCTTGCTGCTGCTGCCCGCGGCGCGCCACCAGCCCGACATGATACCACCGTTAGAGCGGTCAGCGGCAACGGGCGCGCCGCACTACCGCCCGCCCTAA
- Protein Sequence
- METEVNAAGGNNEDQQELQAAAEALQLVKHEERLEQDRAADKNGGATSEPPVPNQQDTPQPQSVITSRRAVRTITTAGHITTDDAEINPEDGVKDEPPEPPPLEHEQNAQMHQYAPKLEENEARNLAQQHYDEERLRLVEAETARYLAFKQEPYRTLPSPVTDKRMQVQYSRAPQRPAYSSRPLSLRYGAPHHVIVAQDGDPEDHGHDSFLGAKDKPEQLQYAQNDDIGAPGTSDGRQYGAVLSDQVSASSSLEMIQTTSLNSQQAVGVAYQQVKYETRGESELRPTTYASLQPVTSVHGGYAYAGQSPQYGGAGGYSAYGGGGKELLTLYGGAAGAAASGTRGDESPPSQLLYRSDPTLSSSSLTTRGAHVVYGSVVPPSQTVYEAPASPNSQQVTLYTHGNAVQYKVAGEHYLGQGGGVEYVPVSGYEGSLLVEGYAAQAQPWPAHNMLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGAHSVSRPGPGALPVEAHSHKVLPPLYAAVEAGAPLLLLPAARHQPDMIPPLERSAATGAPHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00290334;
- 90% Identity
- iTF_00342816;
- 80% Identity
- -