Cros003693.1
Basic Information
- Insect
- Choristoneura rosaceana
- Gene Symbol
- GATA-B
- Assembly
- GCA_037349165.1
- Location
- JAZBNJ010000006.1:20221381-20232833[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-18 1.5e-14 54.3 3.0 1 34 157 189 157 191 0.97 2 2 3.4e-18 1.2e-14 54.5 6.1 1 34 226 258 226 260 0.97
Sequence Information
- Coding Sequence
- ATGTCTCTTTATAAATGGTTCTATTTTTCTGTTAGGGGCGGCGGTGGCAGTGTGTACCCACGGTGTCCGTACACCACCAGTTCCCCCTACTTCGGCAACGGAGCAGAGCTCTCAGCGCAGCCGCAAATCTGGAGCTCTAGTGCAGGCGGTTCACCCAGCTACGGCGGCTCGAGTGGAAGTGCGACGGGCGTGGTGATTTCTGAAGAATACGGCGAGAGCCCAGGCGGGGGCTCCGGTGCCGGCGGGGGGTCGcccggcgccggcggcggctcCTTGCCGGCCTTCAACACCCGCTTCGGCGGTCCCTACGGTTGTGCTACTTCTCGACCATCCACTGTCTACGGACCGTCCACGTTGCCGAATAACGCCTATGTTCATCAGGAGGTCTGGCTGGATGGCGGTCGGCGTCCATTCTCTGCCAACCTTTCAGCAATCGAGATGGCAGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCGACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTCTGCAATGCTTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCCCGCCGGCTGGTACGTCAGCGGCACGCGGCGCACGCCATGCCCGCACCCGCCAACGACATGGGAACGAAGCGGCCAGGCATGTCGTGCACTAACTGCCACACGACGATGACGTCGCTATGGCGGCGCAACGCACACGGGGAGACTGTGTGCAACGCTTGCGGCCTGTACTACAAATTGCACAGCATCAACCGCCCCTTGGCTATGAAGAAAGACTCTATTCAGTCAAGGAAACGAAAACCGAAAAATAGCTTGAAGGCAGAAAGAAACTTGAAGAATTTGACACATAATTCGCACTCTACAGCAATGAAAATGGAAAATCTCTTGGACGCTGGCGCGACGGTGGCGACGAGCGTGGGCGAGACGCGGTCGTCGCTGGCGCTGGGCTACTACGTGCAGCAGCAGCTGAAGCTGGAGGAGCCGCCGccggcgcacgcgcacgcggGCTCGCTGCaccacgcgcacgcgcacgcgcaccacCACCAGCTCTACGACGACGAGTaccggcgcgccgccgccgagTCCGCCGACCGCCTCGAGCGCCCCACAGTCGTCTCCATAGGCAGCTGA
- Protein Sequence
- MSLYKWFYFSVRGGGGSVYPRCPYTTSSPYFGNGAELSAQPQIWSSSAGGSPSYGGSSGSATGVVISEEYGESPGGGSGAGGGSPGAGGGSLPAFNTRFGGPYGCATSRPSTVYGPSTLPNNAYVHQEVWLDGGRRPFSANLSAIEMAEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHAMPAPANDMGTKRPGMSCTNCHTTMTSLWRRNAHGETVCNACGLYYKLHSINRPLAMKKDSIQSRKRKPKNSLKAERNLKNLTHNSHSTAMKMENLLDAGATVATSVGETRSSLALGYYVQQQLKLEEPPPAHAHAGSLHHAHAHAHHHQLYDDEYRRAAAESADRLERPTVVSIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00009671;
- 90% Identity
- iTF_00156861;
- 80% Identity
- -