Cros012544.1
Basic Information
- Insect
- Choristoneura rosaceana
- Gene Symbol
- Myrf
- Assembly
- GCA_037349165.1
- Location
- JAZBNJ010000017.1:2223120-2258656[-]
Transcription Factor Domain
- TF Family
- NDT80_PhoG
- Domain
- NDT80_PhoG domain
- PFAM
- PF05224
- TF Group
- Unclassified Structure
- Description
- This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6e-32 9.3e-28 98.6 1.0 2 172 284 421 283 425 0.92 2 3 1.1e-08 0.00038 21.7 0.0 135 180 425 467 422 467 0.82 3 3 0.051 1.8e+03 -0.1 0.0 65 97 735 767 727 822 0.78
Sequence Information
- Coding Sequence
- ATGGAATATTCTTGGCATATGGAGGACAGTGGTAACAGTAATGTGAGGAGTCGAGTGCAGGGGAGAAATACAGGTCCGGGCCTCATCGACGAGCTGGAGGCCTACATGGCTCCCGTGGGGGACTACCCCCCCGACCGACGCCTTGGGAACCATCAACTTCCAGAGAGCCCACCAGACTCTGGCTCAGAGCATCCATACAGTCCAGAGTCCCAGGCCCACATAGTCTCCCAGACGGTCCTAGGGCCAGACTATGTTCTGGTCCACGACCATATGCCCCCCCACGAGCTCATACAGCCTGGGGGGGACTATATGTACGAAGAACTGAAGTCTGACAACTTGGAGCATGAGgtGTTAAGAAATAATTTGAGCGATGTGGTGGTGATGCCCCAGGATGGGATGGATCTCGGCATCAGAACAGTCCGGCATGACTTGGGGTTGGATCCCATCGCATATCAAAATAGATACAACCAAATGCGCGTGGATCTGCCGGAGCTGGACCACGCCATCAGCCCGCAGCTGGTCTCCCTCGGCCACGAACCCCTGACTCCGGTCTACACGAACCTGCAGGAACCAAGCAATAAGAAGAGGAAACACTCGCAGGATGTCTCGCAAGTCAAGTGTGAACCagCCGCCCTGTCTCCGGAGACATCGCACGCCCGCCCAGCGCCGCCGCCCTCCGTGGACGGCTCGGAGGCGGGCGATGACGCGCCACTCCAGTGCATCAGGTTCACAGCCTTCCAGCAGACCACATGGCACGCCCTTTATGACTGCAACTTGAAGCCGCTCCAACCACCATCCTACGTGGTCGGCGCTGACAAGGGCTTCAACTTCTCCCAAATCGACGAGGCCTTCGTCTGCCAGAAGAAGAACCATTTCCAGGTGACCTGTCAGATCCAGATGCAGGGAGACCCTCACTATGTAAAGACCAGCGAGGGGTTTAAGAAGATCAACAATTTTAGACTGCATTTTTATGGAGTTAAGGCAGAGGATCCAAGTCAGGAGGTGCGAGTAGAACAAAGTCAATCAGATAGAACAAAAAAGCCTTTTCATCCTGTGCCTGTGGAACTCCGCCGTGAAGGCACCAAAGTGACCGTCGGTCGCCTCCACTTTGCGGAAACCACTAACAACAATATGAGGAAGAAGGGCCGGCCGAACCCTGACCAAAGGCACTTCCAACTGGTCGTGGCGTTGCGAGCACACGTGCCCAGCGGCGATGTCATGGTGGCCGCCAGTGCCAGTGACCGCATCATCGTACGGGGTCGGCCAAATCCTGACCAGAGGCACTGCCAGCTGGTCGTGGCGTTGCGAGCACACGTGCCGAGCGGCGACGTCATGGTGGCCGCTAGTGCCAGTGACCGCATCATCGTCAGGGCCTCCAACCCGGGTCAGTTCGAGTCGGACTGCACAGAGAACTGGTGGCAGCGTGGCGTGTCTGACAACAGTGTGCATTTCAACGGACGTGTCGGTATCAACACGGACCGGCCTGATGAGTCTTGTGTTATTAACGGTAACCTCAAAGTGATGGGTCACATCGTGCATCCATCAGACGCTCGTGCCAAGCACAATATCGAAGAACTGGACACAGCTCAACAGCTGAAGAATGTGCAAAGCATCAGGGTTGTTAAGTTCAACTACGACCCTTCCTTCGCCGAGCACTCGGGTTTACTCGGTTTCGATCCGACCTCCGCGGCCCCTCAAGCCGACACTGGTGTCATAGCTCAAGAGGTTCGCAGGGTGCTGCCTGAAGCGGTCAAAGAGGCGGGCGACGTCACACTGCCCAATGGAGACACTATACACAAGTTCCTGGTTGttaacaagGACCGTATCTTTATGGAAAACCTAGGCGCCGTGAAGGAGCTCTGCCGCGTGACGGGAAACCTGGAGTCCAGGATCGACCACCTGGAGAGGGTCAACAGGAAACTCTGCAAGATCAGCATCCTCCAGCGGAGAGATAGCGCGCGTTCTAATGTTAGCAGTGagTCCCATTTCTCAGCGATATCATCATCCTCGAAATCCTTTTATAGCGATGGCAACATTTCCATAGACCAAATAAGAGATATAGCGCGCAACATCAGGAAACACGAATGTTGCCACAAACTAAGCCACAACTCGCCGAAATACACAAGAAAACAGTGTAAAAACTGTCACGATCCACGAAACTATTCGAAATATGGCAAATTCTACAACTACAATAAAACCTGCGTGCGATACCATACTAATAAAGAAGAAAAACACGAATGTAACTTTCCTTCTTAcgttggtactgtggattcagAAATGCAGAAGATTTCAGATGATTACAGCACTATGTCGAAAAAGAAAGATACTTGTCTATGGTTGAAGGATGAGGACAATTTTGCGTGTGGCAACTCCAAGCTTGCGTTTTGTTGCCGCAAGAAAGAATACAGTGATGCCAGCAGCGAATTGATTTCAAATAAGTTTCTACAAATCGTCATcaccattttgatttttattatggCCGTTTGCCTGGTTGTAATGTCCGCACTGTACTTCCGCGAACACCAAGAACTCCTCAACATGAAGGAAAGTCGACAGCACGAGAAATACAATACATACTACAATAACTACAAGAAACTAGAAAACATGCCGGCGTACAGAGCGACACCGCCCGATTTGAATCAAATACAGAATTTGAAGCCCTCACAACATGCTCCTTCAAAGAAAACTAAagAGAAAGGCACCCACAAAACGACGCAAGAGTTTACTACCACATCATCAACGGAATCTCCTCACACGACGGCGACGACGCTGCATGCTTCTAAGAACTATGTGCTCAATGTACTCAACATGGACGCGTCGACGCCGGCGCCGCCCGACCGGCCGCTCGCCGTCGCCCGCAGCGCCGAGCTCTTCGGCAGCGCCTGCGCATTCGCGGCGAACGCCGACAACGAATTGGACGCTGAGTGCCAGTCCTCATGCAGCTTGGAGCCACCGCAAGGCTACGAAACTCAGGAGCCATTGGAACGTATAAAGCAAGACCTGAACGATACGTTCGTTCGTCCCCTAGAACCCCGTCTAGACCCTCACGAGAAACTACCCTCAATCCCAATCATCCCGGAGAAGAACAATTCGGAGACATTGAAGCAGGAAAATGAATCGTTCAAAACGAGATTGCACGAAGAAATGATGGCGGAATCGAATCTTCTGGATCCGAATAAGATGAATCTGACGGATAATTTGAGTGGGAGAGTGAGAAGGAACGTTAGGAGGAAGAGAGAGACCAATGAGGCGCTGTCCAAAAGCAGTTCGGAGGAGATGGTGCTAAACGATCAATCCTATGAGATGGGGCAACCAGaaaatcTAATCACCTTCGGCGTGGCAACTAAGTCGTTCACTAACAACTCCTTGTTCAGTGAGATAGTGTCCACTCACGCGCCTTACAACTTTACATACGCTGTGCCTCTGTCACACTGTCTGCATAATAAACACATCGATCTAATTATCAGGTCACCCCGTCTCAAAGACGTAAGGCTCTGCGATCTCCAATGCAAGTACGACTCGGAAAAGAACTGCCAGCTGAACCGAGATATGGCCAAACCCATCCTCGGGGGCGGGGCCTGGAGCTCCCGGATGACCCTGGAGTGTAACCTGGATAGGATGCTGAAGATAAGAGCCTCATTCATGGCTAACAAGAACCTCTGTCTTCTTGCTCCAGAACACAAGACACCTCTCCTAGAATTTAATATTCACGTGTATAGAGATTGTCATAATTGA
- Protein Sequence
- MEYSWHMEDSGNSNVRSRVQGRNTGPGLIDELEAYMAPVGDYPPDRRLGNHQLPESPPDSGSEHPYSPESQAHIVSQTVLGPDYVLVHDHMPPHELIQPGGDYMYEELKSDNLEHEVLRNNLSDVVVMPQDGMDLGIRTVRHDLGLDPIAYQNRYNQMRVDLPELDHAISPQLVSLGHEPLTPVYTNLQEPSNKKRKHSQDVSQVKCEPAALSPETSHARPAPPPSVDGSEAGDDAPLQCIRFTAFQQTTWHALYDCNLKPLQPPSYVVGADKGFNFSQIDEAFVCQKKNHFQVTCQIQMQGDPHYVKTSEGFKKINNFRLHFYGVKAEDPSQEVRVEQSQSDRTKKPFHPVPVELRREGTKVTVGRLHFAETTNNNMRKKGRPNPDQRHFQLVVALRAHVPSGDVMVAASASDRIIVRGRPNPDQRHCQLVVALRAHVPSGDVMVAASASDRIIVRASNPGQFESDCTENWWQRGVSDNSVHFNGRVGINTDRPDESCVINGNLKVMGHIVHPSDARAKHNIEELDTAQQLKNVQSIRVVKFNYDPSFAEHSGLLGFDPTSAAPQADTGVIAQEVRRVLPEAVKEAGDVTLPNGDTIHKFLVVNKDRIFMENLGAVKELCRVTGNLESRIDHLERVNRKLCKISILQRRDSARSNVSSESHFSAISSSSKSFYSDGNISIDQIRDIARNIRKHECCHKLSHNSPKYTRKQCKNCHDPRNYSKYGKFYNYNKTCVRYHTNKEEKHECNFPSYVGTVDSEMQKISDDYSTMSKKKDTCLWLKDEDNFACGNSKLAFCCRKKEYSDASSELISNKFLQIVITILIFIMAVCLVVMSALYFREHQELLNMKESRQHEKYNTYYNNYKKLENMPAYRATPPDLNQIQNLKPSQHAPSKKTKEKGTHKTTQEFTTTSSTESPHTTATTLHASKNYVLNVLNMDASTPAPPDRPLAVARSAELFGSACAFAANADNELDAECQSSCSLEPPQGYETQEPLERIKQDLNDTFVRPLEPRLDPHEKLPSIPIIPEKNNSETLKQENESFKTRLHEEMMAESNLLDPNKMNLTDNLSGRVRRNVRRKRETNEALSKSSSEEMVLNDQSYEMGQPENLITFGVATKSFTNNSLFSEIVSTHAPYNFTYAVPLSHCLHNKHIDLIIRSPRLKDVRLCDLQCKYDSEKNCQLNRDMAKPILGGGAWSSRMTLECNLDRMLKIRASFMANKNLCLLAPEHKTPLLEFNIHVYRDCHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00772911;
- 90% Identity
- iTF_00156272;
- 80% Identity
- -