Cros005712.1
Basic Information
- Insect
- Choristoneura rosaceana
- Gene Symbol
- CSRNP3
- Assembly
- GCA_037349165.1
- Location
- JAZBNJ010000009.1:5864396-5866636[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.29 1e+04 -2.9 2.4 107 107 72 72 11 129 0.56 2 3 0.2 7.1e+03 -2.4 0.3 79 108 165 188 130 207 0.55 3 3 8.5e-104 3e-99 332.3 8.2 1 218 221 430 221 430 0.93
Sequence Information
- Coding Sequence
- ATGGGAGACGCTACAGCACAAGGAAGCAGCCATTTGGATGAGGAGCCAGAAAGAACAAAAGACATTATCAACAACCAAGGTGATTTAGTAACAATGGAAGCAAAATCAGGAGACCAAGAATCTTTATTTGTGATAAAGGACGAAAAAAGTAGTGACAGTGATGGTAACAGTGATGATCTTAGCTCTAATGatgaacaaaacattgttgATAGCAGCAGTAATTCTCAGTTTTATGAGAGCACCGATAGTAAAGCAGATTATGCTCTTAAGATTGATGACAATGATACACTTAGTGATATAGATGACATAAAGACGGATACTGCATCAGCTGACAGTGAAGATTCAGCCCTCGGCAGTCTACCACCAGATAGCACCAGTAATGACAGAGACGAAGAGGTCCAAGATCGATCAGATGGAAGCGACTCTGGAATTGGATCAGAAACAACAGAAGATCGAAAAGTTACGTTTAATCTAGATTTGCCTTGTACAAGTACTCAAAATAATACTGATAGTCAAAAACATTCGGCTGATTTAAGTAGCCGGGAAAATAAAGACGATGACGATAATATTAAATGTATTGAACCACAAATAAAGGAACCTGTCAGAAGTAGCCTCAAAAGAACGTGCACTTTTGATAGCGCAGAAGGACCGCCTATGAAGAAGAGAAAAGAAGGAATTAAATTCGACAACGTTACTGTTTATTATTTTCCTAGAACTCAAGGATTCACGTGTGTTCCATCCCAAGGTGGCTCGACTTTAGGTATGGAGAGAgagcacacgcacacacaaaaATTCACTTTAGCCGAACATGCTTTAGAACAAAGAAGGCTACATAGACAAATTTTACAACAGCTTAAAAGCGAACGCCATTCATTGCAAGGAGCAGCATTGTCATCGAGTGAAGAAAGCGACACTGAAGAAGAAGCAAGTGACATCTCCGAATCAGAATTGGATTTAGATAGCTATTATTTCCTTCAGCCGGTGCCAACGCGTCAGAGACGGGCTCTATTACGGGCAGCCGGAGTCCGAAAGATAGAAGGATATGAAAAAGATGAGTGCAGAGATATAAGAACTTCTCGTGAGTTCTGTGGGTGTGCTTGCAAAGGAGTATGCAATCCAGAAAGTTGCTCATGTAGTGTGGCTGGCATTAAATGCCAAGTTGACAGATTAAACTTCCCCTGTGGTTGCACCAGAGACGGATGCGGTAATACTACCGGTCGGATAGAGTTCAATCCTGTAAGAGTTCGAACTCACTTTATTCACACCCTCATGAGACTAGGCCTTGAAAAGAAAAATGAACAAAACCAAGCAGCTAAAAGGCAGTGGGCTGAATCCCACAACACAAATTCCACTGCTTGTGTTGCTAACAATTCTTATGAGACAGAACGCTGTCTCACGCACGAAGATGGCTTACTTCGTGACGTAAATTTGTCACCAAGGGTAGAAGTGGAATCATGCGTAAACGCTGGCAGTTTCAATAACGTACATTGTGACATGAATAATATTCCCAGTCAAAGCAATCACAACATACAAGAAGAAAAACGATACAATTATGCAAATAATGCGCTAAACCACAGAGTTTTAAATGATAACAGTGTAATGCATTTCGATGATAACGTTCATAGCAATCGAGCTGACTCATATACTTGTAACATACTTCAAGGAAAGGGTCCTCCTTACTCGATGGCCAATAACATGGGATTCGATATGTCGGGTAATGTACAAAGGTTTCATAATGATCTCAATTATTCTTATGGGCAGCATACCAACAACAGTCAATTTAAGGGCCTACAAAGTTTTTCTGCCACCAGTTTCGAAGAGTTTGCCCACAACTCTCATATCTCAATGTTTAGTCATTACGGCCATATGTACGTGCCAGACTATATGCACAAACCTAACACAGGTATGCAAGACCACGGTTCATTGCAGTACCAGCCACCCCAAAACAATTATGGCGTGTATAAAAGTACCGAATGTGTCAGTGAAGAAAATAAAGCAGATTCATATTATAACATGACGTTGCCATATCAAACTAGCAGTAAACTGCAAACGGACGAGAATGATGAGAACTGGTTCAGCCACAAAACGCTGTTGAACCTGGATCACTCGGACCAGACCACGCAGGACGCGTCCGAAATGCACCACCAGCCTCCAGAGACTACTGTGGAAACCACAACCGACTCTACAGATAACTTTGGCGAGCTTATTAAGAAAACTATGGTAGAATCTGTTACTGTGTAG
- Protein Sequence
- MGDATAQGSSHLDEEPERTKDIINNQGDLVTMEAKSGDQESLFVIKDEKSSDSDGNSDDLSSNDEQNIVDSSSNSQFYESTDSKADYALKIDDNDTLSDIDDIKTDTASADSEDSALGSLPPDSTSNDRDEEVQDRSDGSDSGIGSETTEDRKVTFNLDLPCTSTQNNTDSQKHSADLSSRENKDDDDNIKCIEPQIKEPVRSSLKRTCTFDSAEGPPMKKRKEGIKFDNVTVYYFPRTQGFTCVPSQGGSTLGMEREHTHTQKFTLAEHALEQRRLHRQILQQLKSERHSLQGAALSSSEESDTEEEASDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGVCNPESCSCSVAGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPVRVRTHFIHTLMRLGLEKKNEQNQAAKRQWAESHNTNSTACVANNSYETERCLTHEDGLLRDVNLSPRVEVESCVNAGSFNNVHCDMNNIPSQSNHNIQEEKRYNYANNALNHRVLNDNSVMHFDDNVHSNRADSYTCNILQGKGPPYSMANNMGFDMSGNVQRFHNDLNYSYGQHTNNSQFKGLQSFSATSFEEFAHNSHISMFSHYGHMYVPDYMHKPNTGMQDHGSLQYQPPQNNYGVYKSTECVSEENKADSYYNMTLPYQTSSKLQTDENDENWFSHKTLLNLDHSDQTTQDASEMHHQPPETTVETTTDSTDNFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462401;
- 90% Identity
- iTF_01135765;
- 80% Identity
- -