Cros013542.1
Basic Information
- Insect
- Choristoneura rosaceana
- Gene Symbol
- Ncor2
- Assembly
- GCA_037349165.1
- Location
- JAZBNJ010000018.1:13105079-13137025[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-08 0.00011 23.2 0.0 1 43 418 460 418 462 0.96
Sequence Information
- Coding Sequence
- ATGACAATGACAATAGCATGTGCAAAGGCCGGGCAGTCGGAGCACGGGCACGGCGCGCTGGCGTTCGGTGGCAAGCCGGCCGCCGGGGCCGTGGTGGCGGCGCCGCAGCCCcgggcgccgcccgccgcgccctaCCCCCCGCAGTACCCCACCCTGCGGCTCCACCAGCCCGGATATGGCTCGGCTGCATTGTCCTTCAGGGACACGAGCTACGGACGTGGCGGGGGCGCCGTCGGCGAGTACCGGGCGCCCGGTACTCGCATGTCCCTCCTCAGCACCGCGTACctcccgccgcccgcgccgcccgcgcaccacccgccgcccgcggaCCCGCCGCCCTTCAAGAAGATCAGACTCACCGCGGAGCGGCCCTCGGTTACGACCCTGCATCATCAGCCGCTCAGGGTGGATACCCGGGAGCCGGTGAATAGCTATAGTACGGTAGAGGTTCTGTCTCCCAACCCGCCTTCCGAGCCCACGGTGGAAGACCAGAACTTTCGGACGACGAAGGATGAGCTTATACAGCAGATCAGTAAGGTGGACCGAGAGATGGCGCTCTCAGAGGCCATGCTCGCCAAGCTCAAGAAGAAGCAAGAGGAGCTCGAGCAGACCGCCACGAAGCCCGCGCCCGCGATGGAGCCCGAGGAGGCGCCCCCTAGACACAGGAGCCTCGCGCAGTGCATTTACGCTGAGAACAGGAAAAAGGCTGCGTCCGCGCACGGTCTGCTAGCGCACCTGGGCCCCCCGGTACTGTACCCGCTGTACAACCAGCCTCAGGACACTGAGGTGTACCACGAGAACATCCGCCGGCACAAGGGCTTCCGCCGGCGGCTCGTCGACCACGTGCGCCGGCTCAGGCAGGAGGCCGAGAAGAGGGAAGACGCGTTAGCAGAAGAGTACAGCAAACGAGCAGTGGAATGGGCGAGAAGAGTCGAGCGGATAGAACAGGGACAGAAGAGGAAAGCGAAAGACGCGAGGAACCGCGAGTTCTTTGAGAAGGTATTCCCGGAGCTAAGGAAACAGCGGGAGGAGCGGGAACGCTTCAACCGTCTGGGCGCGCGCGTCAAGTCCGAGGCGGAACTGGAAGAGATCGCAGACGGGCTTCACGAGCAAGAGCACGAGGTCAAGAAGATGCGGTCGCTGACGGTCGTGCCGCCGCTGCTCAGGGACCCGAGGGACCCCACTCCTGTCTATAAGGATACCAACAGACGATGTATGGACATGGAGGCGGAGCATAAAGAGTTGCAACTGAAGAACGTGTGGACGAGGGCAGAACGAGATCTATTCAAGGAGAAGTACCTCCAGCACCCGAAGAACTTCGTGCAGATAGCTTCCTTCCTGCCGAGGAAGAGCGTCGGGGATTGTGTGAGgtTCTACTACCTGTCGAAGAAGCGCGAGAATTACAAGCAACTCCTGCGCAAGCCGCGGCAACGGCGCACCGCGCGCGGCAACCCGCCGCGGCCCGCGCCCGAGCCCGAGCTGCCCGCCGGCGTCGTCACGAGGCTCCAGAGATCGCAGGGTACGACAGTCAGGCCTCCGGACAAGGACCAGAGCCCCGAGGAGCAGGCGCTGGGAGCCTCGGAGATGGCCTCCGCAGCGCCCGCCCCCCTCCCTCACACTCTCGTGGAGCTGTCGCGTacgccgccgctgccgccgtcgccgccgccggcgtcgtccgcgccgcccgcgcccgcgccggccgccgccgGCGGCGCCGTGCCGCCCGGCAGCCCCGCCCCGGACCAGCCCGAACCGCCCACGGATCAGACTGTACCCACGTCATCGTCGACGCCACCGGCGACGACGCCGACGCCGGCCCCGTCGCCGCCGGCGGGCGCGCCGGGCACGCCGCTGCCCGCGTCGCCCGCCCCAGCGGTGGGCAGCGCGCCGCCCACGCCGCAGCCCGCGCAGCCGCCCACGCCCACTCAGCCGCCGCCCACGCCCGAGACTGGTAAGTTAGTCCATCAATGTTCCAGCACCATGTGTTTTGTGCTCTAG
- Protein Sequence
- MTMTIACAKAGQSEHGHGALAFGGKPAAGAVVAAPQPRAPPAAPYPPQYPTLRLHQPGYGSAALSFRDTSYGRGGGAVGEYRAPGTRMSLLSTAYLPPPAPPAHHPPPADPPPFKKIRLTAERPSVTTLHHQPLRVDTREPVNSYSTVEVLSPNPPSEPTVEDQNFRTTKDELIQQISKVDREMALSEAMLAKLKKKQEELEQTATKPAPAMEPEEAPPRHRSLAQCIYAENRKKAASAHGLLAHLGPPVLYPLYNQPQDTEVYHENIRRHKGFRRRLVDHVRRLRQEAEKREDALAEEYSKRAVEWARRVERIEQGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEVKKMRSLTVVPPLLRDPRDPTPVYKDTNRRCMDMEAEHKELQLKNVWTRAERDLFKEKYLQHPKNFVQIASFLPRKSVGDCVRFYYLSKKRENYKQLLRKPRQRRTARGNPPRPAPEPELPAGVVTRLQRSQGTTVRPPDKDQSPEEQALGASEMASAAPAPLPHTLVELSRTPPLPPSPPPASSAPPAPAPAAAGGAVPPGSPAPDQPEPPTDQTVPTSSSTPPATTPTPAPSPPAGAPGTPLPASPAPAVGSAPPTPQPAQPPTPTQPPPTPETGKLVHQCSSTMCFVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00772841; iTF_00462349; iTF_01464118;
- 90% Identity
- iTF_00462349;
- 80% Identity
- -