Cros024177.1
Basic Information
- Insect
- Choristoneura rosaceana
- Gene Symbol
- dnajc2
- Assembly
- GCA_037349165.1
- Location
- JAZBNJ010000036.1:1638823-1644183[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-06 0.0021 19.1 0.0 2 33 71 105 70 112 0.84 2 2 3.1e-11 5e-08 33.9 0.1 2 43 151 197 150 199 0.87
Sequence Information
- Coding Sequence
- ATGATCGTCTCCCATAACTCTTCATGCATGAGAGAGGCGGAAGAGAAGGCCCGAGCGGAGCgcgaggcggcggcggcggaagAGGCGCGACAGAACCGCGTGCGCAAGCGCCGCTTCGTGCCGCCCGCAAGGGAGGCCACGGACTGTCTGCTGGATCCTGCTGATGACGCGCCAGCGGCCGCTCCCGTCCAGgcgCCGGTGATATCGGGCGGCCTATGGACGGACGATGACTTGGCGGAGCTGATCCGCCTGGTGAAGAAGCACCCGGGGGGCTCCGCGGAGCGCTGGGAGCGCATCGCCGCCGCCATGATGCGGAGCGTGCCCGAGGTCACCCACATGGCTGCCAAGCTCAAGGATAACTGCTACAGGATCCCCGGACAGGAGCCCGAGCCTGTGCCCGAGGAGCTGCCGAAGAAGGTGAAGACGCGTAAAGCAGAGGAGACCAGCAGCGGCAACTGGTCGCAACAACAGCAGCGCGCGTTGGAGGCGGCGCTCGCCAAGCACCCCAAGGGCGGCGCCGGCGACCGCTGGCAGAAGATCGCCGCCGCCGTGCCCGGGAAGACCAAAGAAGAGTGTATGCAGCGGTGCAAATACCTATCAGAGTCATTacggaaacagaaacagaaagaagaagaagaccgATTGAGAGAAGAGAGCGGCGAAGCGCACGAGACAGACGCTCTTATCGAAGAGTCATAA
- Protein Sequence
- MIVSHNSSCMREAEEKARAEREAAAAEEARQNRVRKRRFVPPAREATDCLLDPADDAPAAAPVQAPVISGGLWTDDDLAELIRLVKKHPGGSAERWERIAAAMMRSVPEVTHMAAKLKDNCYRIPGQEPEPVPEELPKKVKTRKAEETSSGNWSQQQQRALEAALAKHPKGGAGDRWQKIAAAVPGKTKEECMQRCKYLSESLRKQKQKEEEDRLREESGEAHETDALIEES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -