Cros017455.1
Basic Information
- Insect
- Choristoneura rosaceana
- Gene Symbol
- dnajc2
- Assembly
- GCA_037349165.1
- Location
- JAZBNJ010000023.1:1638998-1642729[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00045 0.73 10.9 0.0 2 31 432 465 431 469 0.86 2 2 2.9e-13 4.6e-10 40.4 0.2 1 44 556 603 556 605 0.91
Sequence Information
- Coding Sequence
- ATGACGGAGGGAGAGTCTAGTAACAATTGCCGGACGGTGGCGATACCATGCCCGTTCGAGAAGAGAAAAGTGGAATGCGTCGGGGCTGCGTTCCTTAGATATTACAACATAAAATGCCACGGGGAGGATGCTTTGTTCGAGACGTCTAAATCCAGCGATAAGTTGGAGGAGGTGGTGTTCGACGACGACGTGGAGTACTTACGGAGCTTGGACCCTAAAGAATGGAAGCAGCAGGACCACTATGCCGTGCTGGGTATGAAGAAACTGCGCTACAAGGCAACAGACGATGACATAAAACGAGCGTATCGCCAGAAAGTTCTAAAACACCACCCGGACAAGCGTAAGGCGCAAGGTGAGGATGTCCGCAGCGACGACGACTATTTCACGTGCATCACAAAGGCCTACGAGATCCTCGGGACGCCTGTCAAGCGCCGATCGTACGACTCCGTCGACCCAGAATTTGACGACACTGTGCCGAGTCAGAGCGAGGTTAAGAAAGGTTTCTTTAAAACATTTTCGAAATTCTTCGAGCAGAACGCGAGGTGGTCGGAAAAGAAGAATGTGCCTCCGCTCGGGGACGATAACAGTCCTCGGGAGCAGGTGGAGAGATTTTACGCGTTCTGGTATGAGTTTGACTCCTGGCGCGAGTTCTCTTATATGGATGAAGAGGAGAAGGAGCGAGGGCAGGACCGAGAGGAGCGCCGGTGGATAGAAAAGCAGAATAAAGCCGCGCGAGCCAAGCTAAAGAAGGAGGAGATGGCGAGGATCCGGAGTCTAGTGGACCTCGCGTATGCCAACGACCCCCGGATCCAGCGGTTCAAGCAAGAGGATAAAGACAAGAAGTTGGCTGCCAAACGCGCTAGACAGGATGCTGTGCAAGCCAAGAAAGCAGAAGAGGAGCGGCTCGTTAAAGAAGCTCTGCAAGCGAAACAAAAGGCTGACGAAGCTGAGCGAGCCCGCATTGAGGCCGCCCGCGCCGAACGCGAACAAATGAAGAAGAACCTACGCAAGGAACGCAAAGCTCTTCGTGACTGCTGCAAAGCCAACAACTACTATGCTGAGAATGAAGAAGAAACTGTTTCGCACATGGCCGCAGTAGAAAAACTATGTGAAATGATGAAAGCAGTAGAACTGCAAGATTTAGTTAAATCTCTGGAAGCTAATGGAAGGGAATTATTCATCAAAACTGTGAAGGAGGCGGAAGAGAAGCTTGAAGAAGAGCGTAGAGCCTTGTTTGACACAAAGAAGGCAGAAGAACAAAAGGCAAAGAAGGATGCCTCTCTCAAAGCACCTATGGAATGGACAGCAGATATGACGCAACTCCTAATCAAAGCAGTGAATCTCTTCCCAGCAGGAACAAACCAGCGGTGGGATGTAGTTGCCAATTTCCTCAACCAACATGGCACATTCACTGATGACAAACGCTTTAATGCTAAAGAAGTCTTAAACAAAGCTAAGGACCTGCAAAGCTCTGATTTTTCAAAGAGCAGCCTTAAAAAAGCTGCCAATGAAGAAGCTTTCGACCAATTTGAGAAGGAAAAGAAAAAACCTGCTAACAATGTTGATGATAATAGTATATCCAAGAGTGACAGTGGGTCTAAATTAGTTAATGGCACAGCTAAACCGAAAATGAATGGAGATGTACCGAAAGCAGAGAAGGAAGCAAAAGATGTCTGGACTAAAACTGAGCAAGAACTACTAGAACAAGCCATCAAGACTTTCCCTGTCAGTACTCCAGAACGTTGGGATAAAATTGCAGAATGCATCCCGAATAGGTCCAAAAAAGATTGTATGAAGAGATACAAGGAACTAGCTGAATTAGTTAAAGCGAAGAAGCAAGCCGCAAACCTAGCTAAATAA
- Protein Sequence
- MTEGESSNNCRTVAIPCPFEKRKVECVGAAFLRYYNIKCHGEDALFETSKSSDKLEEVVFDDDVEYLRSLDPKEWKQQDHYAVLGMKKLRYKATDDDIKRAYRQKVLKHHPDKRKAQGEDVRSDDDYFTCITKAYEILGTPVKRRSYDSVDPEFDDTVPSQSEVKKGFFKTFSKFFEQNARWSEKKNVPPLGDDNSPREQVERFYAFWYEFDSWREFSYMDEEEKERGQDREERRWIEKQNKAARAKLKKEEMARIRSLVDLAYANDPRIQRFKQEDKDKKLAAKRARQDAVQAKKAEEERLVKEALQAKQKADEAERARIEAARAEREQMKKNLRKERKALRDCCKANNYYAENEEETVSHMAAVEKLCEMMKAVELQDLVKSLEANGRELFIKTVKEAEEKLEEERRALFDTKKAEEQKAKKDASLKAPMEWTADMTQLLIKAVNLFPAGTNQRWDVVANFLNQHGTFTDDKRFNAKEVLNKAKDLQSSDFSKSSLKKAANEEAFDQFEKEKKKPANNVDDNSISKSDSGSKLVNGTAKPKMNGDVPKAEKEAKDVWTKTEQELLEQAIKTFPVSTPERWDKIAECIPNRSKKDCMKRYKELAELVKAKKQAANLAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01544833;
- 90% Identity
- iTF_00009992;
- 80% Identity
- -