Cros029994.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Choristoneura rosaceana
Gene Symbol
-
Assembly
GCA_037349165.1
Location
JAZBNJ010000048.1:1728254-1745775[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.3e-11 3e-07 31.7 0.1 3 89 279 352 277 352 0.87

Sequence Information

Coding Sequence
ATGAACGAACTGTGTCAGCGTTATGAGGATCTAGATCTGTACCGAATAAAACCTGCTGCAGACGAAGTCCTAGCGATAAACGACAAGGTGGTCCTCCGGGCCTCAGACCTCCTGTCTTGGGTGTGCGCCGGCGCGTCTTGGGAGTGGGGGCTGCGCGCCGTGtggcgcggcgcgtgcgcacCGCCCGCCCAGCCGCGCCGCACGCAGCCGCTGCACCGCGCGCGGCTCGACTTCAGCGACGTGGAGCGCGAGAAGAGCGCCATCAATGAGGACGTGGACAGCCCCGGCGTGGTGGTGTTCTCGTACCCTCGCTACTGCCGCTACCGGGCGCTGCTCTCCCGGCTCGAGGGCATCCAGGGAGACTGGCTCAGGGACAGTCTGGTCGCAGCTCTTGGGGGATACGCCGCACCCACCAAGAACACGAGGATACTGTACTGCAAGGACACATTCGAGTACCCGGAACTGGAAGGGCACGAGTTCGTGTGCAACCAGCTGGCGCCCAAGCTGAAGGGCAGACCGCgaggccggcgccggcgccgcgccagCAAGCACTCGCCCTCGCCCTCCTCGCGCTCCTCCGACAGCGAGGGGGCCCGCCCTCCCCCGCCCCCCGAGGTGAGCGTGCCCCCAGCCGGCCCCAAGCTGAAGGGCAGACCGCgaggccggcgccggcgccgcgccagCAAGCACTCGCCCTCGCCCTCCTCGCGCTCCTCCGACAGCGAGGGGGCCCGCCCTCCCCCGCCCCCCGAGCAAACGCCCCGCCGGCTCTCCCTCCGCAACGGCGCGCCAAAATACAGCGATGACGAGGAAAAGGAGCAGACTCCGGAAGACCGCGCCTTCCTGCAGCAGCTGAGGCAGTTCTACCGGGACAGGAAGGAGCCCTTCAAGCTGGCGCACTCGCTCAAAGACCTGTCACTGCGCGAGCTGTACGTGTCTGTGCGCGCGTGGGGCGGCTACGAGGCGGCCTGTCGGCGACGGCTGTGGCGTCGTCTGCACGCCGCGCAGCCCAACACCGCCCGCCGGCACTACGAGCGATTCCTCCTGCCCCTAGAGAAGCACGAAGCAAAGAACGGCCTCCGACCCCTCCAGAAGCCCAACGGGAAACTGGACGAGCCCCAGACCATAGACACGATCGAGCTCCCCGACTCGCCGTTGCGCGAGGCAACCCCGACCCCGACCCCGACCCCGACCGCGACCCCCGCGACCCCCGACAAGCGGCTCCGCACCCCGTCGCCCCGCTCGCCCAAGAAAGAGACGGATGGAGAGACGGGCGAGACGATACTGAAGGATTTTAGTATCATCTCTAAACCGGCTGAGGAATTGAATAGGGAGTTTTTAGATTCGTTGCCGAAGGAAGAGAATAAGATGAAGATAAGCGTGAAGCCGGTGGAGAAGCTTATAGAAGAAGGCAAGCAGGAGGCGAAGCGCGAGCCGCGAGAGGGCGCCGTGTACAGCGACCTCGCGCACAAACTGGACCTCGgcaATGCAGACACGAAGTTCCTCAATGAGCTGGCGTCGGCCCAGCACGAGCTGGTCTCCGGCGGCGCGCTCAGTTCCCTCTCCAACCTCGTCAACGGACACGGGCTGCCCAAAGACCAGAGCGCGCGGCCGGCGGGACGCAGCTCGCTGCGCGCCGTGAGGGTCAAGCCGGCGCGGGCGACCCCCGCCAACCCCGCGACCCCCGCGCGGACACCGCCGGGCGCGCCGCTCCGGCCGGACTCTGCGTCGTCGTCGCcgcctgcgccggcgccggtTACCAACTTCGGCATCCACCGCCCGCCCGCCAGCGCCAGCGACGACGAGATCGTCGAGgtGCCCTACAAGCCCAAAACCCCAGAGATAATAGATTTAGACGAATATCCGGAAAGTCCGCAAGCCGTCAAGAAGAAAAAACTGGACATACTGAAGGAGCGCGGCCTCGAGGTCACCGCCATCCCCACCGCCCCCGCCTGGCCCGCCCCCCCCATCGCCCCCCTAGCGACACCCCTAGCCTCCCCCCTCATGCTCAACCCAGCAGTCCAACACCAAATCATGACGCAAGCCCAAATATTCCAAATGTACAACATAATCCCCCCCAACTACGCTAACGGCGCACAACCCCCCAAAGTGATCCAAGCCACCAGCGCTTTCGGATCCTCAGGCCCAGAGAAAACCGTCTACGGCAACCCCAAAGACCCCTTCATGCCTCCCCCCCACGTCATGCTAGGCACCCCAGTCAAACCCCAACGGAGCGTTCAAACCTCAACTCCCCCCCAAGACATCCTAGACTTGACTTGTAAAAGCCAGTCCCCCCCGACGGGCCAGAAGCCAGCAGTCGAAATCGTCCGAATCCCCACCGTACCCTCCCCATCCAAAAACACATCCCCCCAAAATCTAAGTAAAAACTATACTCTAGTAGACGGGAAGGCGGTAGTAGGTtcaaatctagaaataacattAGTCAATCCCAAATCGACGACGCCCAACAAATCGAAGATACCGCAGAAGAGATCGTCAAACGGGAAATTCGTTTCGGCGAAAACTCCCACCCCGCCGAAGGAATATCCCAAATTTAGCTCCAAAAAAGCGCCCATAGTTGTCCCAAATTATCAAGTCAATCCCAGAGACGATGTATCCCCAACCAGCTCCACTGGATCTAGGGATTCTCAGTCAAATTTGCAGAATAATTTGATGCAGAATGCGTTCAAAGGGCCCAGTAGTTTGCAGCATATGATGGATATGCAGAAAAACGTGTCCAGTATGCAGTTTATGGACCCTATGTATATGAGCGCTTTGTATAGTAGCTTAGCTGGGTCCATGGACCAGCGACAGCTGGCTATGTACAGGGACTTCATGGCAAGCCAGTTCCGAGGGTACTCCGGTCTGCTGGGGGTCACGCCGACAACGAAGAATTGA
Protein Sequence
MNELCQRYEDLDLYRIKPAADEVLAINDKVVLRASDLLSWVCAGASWEWGLRAVWRGACAPPAQPRRTQPLHRARLDFSDVEREKSAINEDVDSPGVVVFSYPRYCRYRALLSRLEGIQGDWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNQLAPKLKGRPRGRRRRRASKHSPSPSSRSSDSEGARPPPPPEVSVPPAGPKLKGRPRGRRRRRASKHSPSPSSRSSDSEGARPPPPPEQTPRRLSLRNGAPKYSDDEEKEQTPEDRAFLQQLRQFYRDRKEPFKLAHSLKDLSLRELYVSVRAWGGYEAACRRRLWRRLHAAQPNTARRHYERFLLPLEKHEAKNGLRPLQKPNGKLDEPQTIDTIELPDSPLREATPTPTPTPTATPATPDKRLRTPSPRSPKKETDGETGETILKDFSIISKPAEELNREFLDSLPKEENKMKISVKPVEKLIEEGKQEAKREPREGAVYSDLAHKLDLGNADTKFLNELASAQHELVSGGALSSLSNLVNGHGLPKDQSARPAGRSSLRAVRVKPARATPANPATPARTPPGAPLRPDSASSSPPAPAPVTNFGIHRPPASASDDEIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTAIPTAPAWPAPPIAPLATPLASPLMLNPAVQHQIMTQAQIFQMYNIIPPNYANGAQPPKVIQATSAFGSSGPEKTVYGNPKDPFMPPPHVMLGTPVKPQRSVQTSTPPQDILDLTCKSQSPPTGQKPAVEIVRIPTVPSPSKNTSPQNLSKNYTLVDGKAVVGSNLEITLVNPKSTTPNKSKIPQKRSSNGKFVSAKTPTPPKEYPKFSSKKAPIVVPNYQVNPRDDVSPTSSTGSRDSQSNLQNNLMQNAFKGPSSLQHMMDMQKNVSSMQFMDPMYMSALYSSLAGSMDQRQLAMYRDFMASQFRGYSGLLGVTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00155097;
90% Identity
-
80% Identity
-