Cros002291.1
Basic Information
- Insect
- Choristoneura rosaceana
- Gene Symbol
- Arid2
- Assembly
- GCA_037349165.1
- Location
- JAZBNJ010000005.1:9749704-9759836[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-19 7.7e-16 59.2 0.0 2 89 17 101 16 101 0.94
Sequence Information
- Coding Sequence
- ATGTCTAAACCACAAATAAATACGAAATCTAGCACCTATATTAAGGATAAGGAAGCTTTTTTGAAAGAACTGAAGCAGTTCAACGAGAGTAAAGGAATACCATTTAAGATTCCTTCAGTGAATTGCATTGACATAGATTTATATCTATTTTATACATTAGTACAGCAGAGGGGTGGCATCAGTaagGTAAACTTCTATGATGTCTGGGAATCTTTTCTGCGTCCATTGCGGTTGCCTCACCCTTGTATCAATGGATCAACACTGCTTAGAAGAATATATGGGACATATTTGGAAAAATACGAGAAGGCCAAGGGACCTCCTAGCCGAGATGATGACAATGACATGGACGACTTGGACTTAAGATCGACTCGTGGCCGCGGCAGTAATGTTCCCAGGACGCCTTATGGAGGAGGAACATATTATTCagCTTCCGGAGAGCCCCTCCGAGCAGTCCAAACCCGAGTGGCTGGGCCCTCGGAACGTCTGGCTTTGTCCCTCCTGTCTCCAATGCCGAATGAACAAGACTTTGCTGTCAATGTCTGCACAGTGTTGGCTGCTGACCACTCCAACAGGATGCCCTTGGGAACCACACCTCATATACTGGATTTCCTGTTAGCGCATGCAGGGGTGTATAACCACATGAGTCTCCGCGACACAATCGGCCGTTCCTACTTCGAGGCGCGCGGGCGGTACCCGCACGAGTTCTGGCAACTccgggcgggcggcggcggtgcTAAGGAGCTGGCTGATGAAACCAAGTTCTCGCAGCTGAGCGGGGACCAGCCCGAGCTGATGGTGCAGGCCCTGGCTGCTCAGAACACGCTCACGGATTGTTTGATGAATGAATGCGGGGGGGAGGAGTTGATTGAGAAGATTTTGGAAGAGGAAGCAAATGAGGACTGGGTGACGGAACCTTCTGAGGATGAACAGTTGTTTGCGCCGGAACTCCCCGGCGGGGCGTCCTGTGTGTATACGCAACGGGTACTCCAGATCGCATCCATAGTGCGGTCACTCTCTTTCCATGAGGAGAACGTACAGTATTTGGCGAAGAATACGACGCTCATACGGTTCTTGCTGCTGTGCGCGAATTGCTGGGTCGGCAGTCTACGGCAGTCCGGGTTGGATGCCCTCGGGAATATTTCCACAGAGCTTATTATTAAGGACCCAGCAACCTGCCTCATATCCCGGCATATTCTGTCCACCATCCAGTCGGCTCTAGTGTCGAACGACCGCGCCAGAGTGTTGGCCGCATTGGAACTACTCAACAAACTGGCCCAGAATGAGGCCAATGAGGACACTCTGCTGAAGGTTTTGGAGGCTAAGGTGTACAGCGACGTGTGCGCACTACTCACGCTCCGAGACATAATGGTGTTGGTGTGCACACTGGAGTGTGTGTACGCATTGACGTCTCTGGGCGACCGCGCCGGCGAGTGCGTTGCACGTCTGCCTGGTCTTGTCGCCACGCTGGTCTCACTCGTCACTGTAGAGGCACAAAGCTACGGCCCCCGCGCATGTATTTTAATGCGTGTGGTGGAGACAGTGAGCGGCCCGAGCGCTATAGCGGCTGCCGCTGAGAGGGAGCAGGACAAAAACACGCAGCAGCAACCGGTATTTAGCTATTTATGTATACTGTCTAAAGATTTTCTGAAAGCGAACGCTATTTAA
- Protein Sequence
- MSKPQINTKSSTYIKDKEAFLKELKQFNESKGIPFKIPSVNCIDIDLYLFYTLVQQRGGISKVNFYDVWESFLRPLRLPHPCINGSTLLRRIYGTYLEKYEKAKGPPSRDDDNDMDDLDLRSTRGRGSNVPRTPYGGGTYYSASGEPLRAVQTRVAGPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRMPLGTTPHILDFLLAHAGVYNHMSLRDTIGRSYFEARGRYPHEFWQLRAGGGGAKELADETKFSQLSGDQPELMVQALAAQNTLTDCLMNECGGEELIEKILEEEANEDWVTEPSEDEQLFAPELPGGASCVYTQRVLQIASIVRSLSFHEENVQYLAKNTTLIRFLLLCANCWVGSLRQSGLDALGNISTELIIKDPATCLISRHILSTIQSALVSNDRARVLAALELLNKLAQNEANEDTLLKVLEAKVYSDVCALLTLRDIMVLVCTLECVYALTSLGDRAGECVARLPGLVATLVSLVTVEAQSYGPRACILMRVVETVSGPSAIAAAAEREQDKNTQQQPVFSYLCILSKDFLKANAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00772660;
- 90% Identity
- iTF_00772660;
- 80% Identity
- -