Cros009363.1
Basic Information
- Insect
- Choristoneura rosaceana
- Gene Symbol
- osa
- Assembly
- GCA_037349165.1
- Location
- JAZBNJ010000012.1:5570256-5590643[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-25 6.9e-22 78.6 0.0 2 89 264 348 263 348 0.94
Sequence Information
- Coding Sequence
- ATGCAAAAGCTCTCTCAAGATTACGATAAAAGTCACGACTCTGACAAGAACGTGTACTTAGAAGTTGACAACGGCACGCAGAACGTACCTATGCCGCCGCGGCCGTCGTCGTCCCTCTCGGACGGCAGCGGGCCGACGTCGCGCTCGAGCGTCGCGCCCGGCCCGGCGCCCCCCGTCCCGCCGCCCGGCGCCATGGTCGCGCAGCCCTACGGCCACCACCAGTACAAGCCCTATCCGCCGCAGCCCTACGGCTACCCGCCACGGAACCACCACCCGTACGGCTATGGGTACCGGCCGCAGCCACCGCACCCCTCGCATCCGCCgccacatccctcgcaacactaTCCGCAGCTCAAACCGCGGCACATGGGTCCGCCGGGCGGGGCGGGCATGGAGGGCGCCATGCCGCCGCCCACGGCGCCGGGCGACTCGCACGACAACGGCCCAGCGCCGCCCGCCACCGCGCTCGTCACCACCGGCCCCGACGGCGCGCCGCTCGACGAGGGTAGCCAGCAAAGCACCCTCAGCAACGCCTCCGCAGCGTCCGGCGAAGAACCTTGCAGTACGCCGAAGGGCCGGAAAGACTTCGGGCCGGGCAGCGCGGCGCCGTCGCCGTCTCCGGGCGCCGGCAGCCACTCGTCCGCGCACGACGACTACGACGCGTCGCCCTCGTCATGGCCGCGCCCGCCCTCTAGTCCCGTGTTTAACAGTCACATACAGCCGGAGTCCTTCAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTTTACGAGATGGACGACGCGCCGGAGCGCCGCGGCTGGGTGGAGCGGCTGCTCGCGTTCATGGAGGACCGACGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAACAGCCGCTGGACCTCTACCGGCTCTATCTGCTGGTGCGCGACCGCGGGGGCTTCGTTGAGGTGACGAAGAACAAGACTTGGAAGGACATAGCGGGCCTCCTGGGCATTGGCGCGTCCTCGTCGGCTGCGTACACGCTGCGAAAGCATTACACAAAAAATCTGCTCGCGTACGAGTGCCACTTCGACCGCGGGGGCATCGACCCGCAGCCCATCATCAACCAGGTCGAGGCTTCTACCAAGAAGAAGAGCGGCAAATCCAACAGCACTCCTAGCACGGGGTCATCGAACTCTCAAGAATCATTCCCAGGCGCGGGTGCGCCGGCGCAGGGCGCGCCGATGGACGGCTACCCCGCGCAGTACGGCGGGTACCCGCCGCAGCCCAACCAGTCACAAGGCGGCGGGCCGGCGGGCGACAACCTCGCCGCCTCCAACCCGTTCGACGAGCCCCCAGGGCCGCGGCGACCCCCAGGTTACCAGCCAGGTTACGGGTACGATTATGGGCCACCGTATCAGGCGACGAGGCCTGTTTATCCTCCTTATGGCCCGGAAGGAGACAGAGGGTACGGTACCGGCAGCGAGTACCGCTACGGCAGCTATGGCGGGTACCGCGGcggcgcgcccgcgccggccggcacgccgccgcccgcgcagccCTACCCCGACTACTACCGGCCGCCGCACCCGCCGCACCCGCCGCACCCGCCGCACCCGCCGCACCCACCGCACCCGCCGCAGCAGCCCCAGCAGCCGCCGCACGAGAtgtcgggcggcgcgggcgccggtaGTCTCATGAGCTCGCAGCTCGCGCGGCAGCTCGTGGCGCCGCTGCCGCCCAGCCAGAGACCCTACTACGGCGGAGGCAAGCCCATGGGTCCCGGATCAGGTCCGGGCGCGGTGGGTGCGGGCTCGGCGGGGGCGCCGCGGCGGCACCCCGACTTCGCGAAGGCGGAGGGGTAtctgggcggcggcgcggcgggcggcgcgggcggcgcgccggcGGCCCAGCCCGGCGCGCGCTTCGGCGGCGCCTGGGGCGCCGGCTTCCCGCGCGCGCCgcagccgcccgcgcccgcgcagccctggcgcccgccgccgccccaGCAGCCGCCGGGCGCCTGGCCGCACCAGCCCTACCAACAGGGTCAAGCGGGATCAGCGTGGGGCGGTGCGCCGCGGCCGCCGACGCAAGATCCTTACGCACCTGGCGTCGTTCCTTCACCGGGTCCCGGTCCCGGTCCCGGACTGAGCATGAGCGGCGGCGGACTGAAGCGCGAGATGACGTTCCCGGTGGAGTGCGTGGAGGGGCAGGTGCCGGCGGGCGAGAAGCGGCGGCGGCTGACCAAAGCGGACGTGGCGCCCGTGGACGCGTGGCGCGTCGTCATGGCGCTCAAGTCCGGCCTGCTGGCCGAGACCTGCTGGGCGCTCGACATCCTCAACATCCTGCTGTTCGACGACAACTGCATAGGGTACTTCGGCCTGCAGCACATGCCCGGCCTGCTGGACCTGCTGCTCGAGCACTTCCACCGCAGCCTCGCCGACGTGTTCGACGCGCCCGCCGAGCCGCCGCAGCCGTGGTACGGCGCGCCCGCcgagcccgccgcgcccgcgccggcgccgccgcgcccgccgccgcccgaccCCGCCGACCGCGTGCGCGTCATCGCCGGCGAGAACTACACGCTCGCCTCGCGCCGCCGCCGCATCGGGCCCGTCGCCTTCCGGCAGGAGCCGGACGCGGCCGCCGCCGACCTGTTCGCGCCCGAGCCCGAGGACCCGCCCGAGCACCGGCTCGACACGCTCGAGCCCTGGCAGCAGGCCGACCACCTCATGCCCTGCTTCCGCGCCGAGTTCCTGCCGCTGCCCGCCGTGCGgctgatgccggggcggcgcgcgCCGTCGCCGCCCGCGTCGCCCGCGCGCtcggccgccgcgcccgccgcgcccgcggcGCCCGACCCCctgcccgccgcgccgccgccggccggcgccgcgcccgccgacGCCACGCGCGACAACCTGGAGGCCGAGCCCATGGAGCTGGAGGTGGAGCGGCGCGTGGCGCTGGCCGTGCGCGACCCCGCGGGCGTGCTCAAGCGGCGCCGGCTCGAGGACTACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTCAACCTGGTGAGCGAGACGCGCGACGCGCTCGCCAAGCGCTGCATCGCGCTGTCCAACATCCTGCGCGGGCTCACGTTCGTGCCCGGCAACGAGGGCGAGTTCTCGCGGTCGGGCGCCTTCCTGGCGCTGGCCGGCAAGCTGCTGCTGCTGCAccacgagcacgcgccgcgcgccgcgcgcgccaaGGCCTACGAGCGCGCCGCGCGCGACGACCACGACGCCGACGCGTGCTGCTCCTCGCTGCGCGGCGAGGGCGAGTGGTGGTGGGACGCGCTGGCGCAGCTGCGCGAGGACGCGCTGGTGGCCTGCGCCAACATCGCGGGCGCCGTCGAGCTGGCGCACCAGCCGGAGGCGGTGGCGCGCCCGCTGCTGGACGGGCTGCTGCACTGGGCGGTGTGCCCGGCGGCGGTGGCGGGCGAcgcgccgccggccgccgcGCCGCACTCGCCGCTGTCGCCGCGCCGGCTGGCGCTGGAGGCGCTGTGCAAGCTGTGCGTGACGGACGCGAACGTGGACCTGGTGCTGGCGACGCCGCCGCGCGGGCGCATCGCGGCGCTGTGCGCGGGGCTGGCGCGCGACCTGTGCCGGCCGGAGCGGCCCGTGGTGCGCGAGTTCGCGGTGAACCTGCTGCACTAcctggcgggcgcgggcgggctGGCGGCGCGCGAGGTGGCGCTGCACGCGCCGGCCGTGGCGCAGCTGGTGGCGTTCATCGAGCGCGCGGAGCAGACGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCCGACGCCATGGGCACGAGCCTGGACATGCTGCGGCGCGCGGCCGCCACGCTGCTGCGGCTGGCCGAGCACGCCGAGAACCGCCCGCTGATCCGGCGGCACGAGCGCCGGCTGCTCTCGCTCGTCATGTCGCAGATCCTCGACCAGAAGGTGGCGCACGAGCTGGCCGACGTGCTGTACCACTGCAGCCAGCCGCACGAACACTAG
- Protein Sequence
- MQKLSQDYDKSHDSDKNVYLEVDNGTQNVPMPPRPSSSLSDGSGPTSRSSVAPGPAPPVPPPGAMVAQPYGHHQYKPYPPQPYGYPPRNHHPYGYGYRPQPPHPSHPPPHPSQHYPQLKPRHMGPPGGAGMEGAMPPPTAPGDSHDNGPAPPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEPCSTPKGRKDFGPGSAAPSPSPGAGSHSSAHDDYDASPSSWPRPPSSPVFNSHIQPESFRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEDRRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTPSTGSSNSQESFPGAGAPAQGAPMDGYPAQYGGYPPQPNQSQGGGPAGDNLAASNPFDEPPGPRRPPGYQPGYGYDYGPPYQATRPVYPPYGPEGDRGYGTGSEYRYGSYGGYRGGAPAPAGTPPPAQPYPDYYRPPHPPHPPHPPHPPHPPHPPQQPQQPPHEMSGGAGAGSLMSSQLARQLVAPLPPSQRPYYGGGKPMGPGSGPGAVGAGSAGAPRRHPDFAKAEGYLGGGAAGGAGGAPAAQPGARFGGAWGAGFPRAPQPPAPAQPWRPPPPQQPPGAWPHQPYQQGQAGSAWGGAPRPPTQDPYAPGVVPSPGPGPGPGLSMSGGGLKREMTFPVECVEGQVPAGEKRRRLTKADVAPVDAWRVVMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHRSLADVFDAPAEPPQPWYGAPAEPAAPAPAPPRPPPPDPADRVRVIAGENYTLASRRRRIGPVAFRQEPDAAAADLFAPEPEDPPEHRLDTLEPWQQADHLMPCFRAEFLPLPAVRLMPGRRAPSPPASPARSAAAPAAPAAPDPLPAAPPPAGAAPADATRDNLEAEPMELEVERRVALAVRDPAGVLKRRRLEDYEDECYTRDEPSLNLVSETRDALAKRCIALSNILRGLTFVPGNEGEFSRSGAFLALAGKLLLLHHEHAPRAARAKAYERAARDDHDADACCSSLRGEGEWWWDALAQLREDALVACANIAGAVELAHQPEAVARPLLDGLLHWAVCPAAVAGDAPPAAAPHSPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGGLAAREVALHAPAVAQLVAFIERAEQTALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLAEHAENRPLIRRHERRLLSLVMSQILDQKVAHELADVLYHCSQPHEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00156034;
- 90% Identity
- iTF_00156034; iTF_01134563; iTF_01135532; iTF_00155091;
- 80% Identity
- -