Ctib028700.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- nfxl1
- Assembly
- GCA_963669355.1
- Location
- OY770263.1:231536473-231559607[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 4.9e+04 -7.8 5.6 15 19 166 170 165 170 0.81 2 18 0.067 1.7e+03 0.6 0.4 4 10 201 207 200 207 0.96 3 18 7e-08 0.0017 19.7 15.0 1 19 215 232 215 232 0.99 4 18 0.82 2e+04 -2.9 1.5 5 10 257 262 257 262 0.94 5 18 3.1e-09 7.5e-05 24.1 11.7 1 19 268 287 268 287 0.97 6 18 0.95 2.3e+04 -3.1 0.9 5 10 311 316 311 316 0.93 7 18 1.4e-09 3.4e-05 25.2 12.3 1 19 322 340 322 340 0.99 8 18 2.3e-05 0.57 11.7 10.3 1 18 375 392 375 393 0.92 9 18 0.18 4.4e+03 -0.8 0.7 1 5 402 406 402 411 0.75 10 18 0.00011 2.7 9.5 15.8 3 18 429 444 427 445 0.91 11 18 2.2e-08 0.00053 21.4 12.2 1 18 454 471 454 472 0.91 12 18 0.42 1e+04 -2.0 1.0 5 10 500 505 500 505 0.94 13 18 2 4.9e+04 -4.8 13.2 7 18 516 527 511 528 0.81 14 18 0.0018 44 5.6 7.1 1 12 540 550 540 550 0.96 15 18 0.00011 2.7 9.5 7.0 1 12 617 628 617 628 0.97 16 18 0.045 1.1e+03 1.2 15.7 3 18 657 672 656 673 0.94 17 18 2.8e-07 0.0068 17.8 11.0 1 16 719 733 719 739 0.86 18 18 2 4.9e+04 -4.4 1.1 6 10 769 773 769 773 0.93
Sequence Information
- Coding Sequence
- ATGTCAAATAATctgcagaaaagaaaaaacaaaaatgacaaaaatgcTAAGATCAAGGATGTTACCAACCCTCAGACTGGAGTCGTAAACAGTAAATTTGAGGTGATCCACAGTAGAAACATCGATAAGGCGAAAATGTTGGCACAAGTCTGCGATTCTAGTTCCGATGAGGAAGAATTGAATGACGATAAAATACTAAgcAGCGTCTTTAAGAATTATGTCGAAGACGGTAACCaattggaaaaatttaaaagtttccTGGATAACTTTTTTCAATCAGGATTTGCAATTTGTTTAATTTGCATAGGAACCGTCAAGCGAGTAGATgcaATTTGGTCATGCAAAAACTGTTATTGTTTCTTTCATCTCACATGTATTAAGCGTTGGGGCAATGACAGCATAAGCACGCAAAAAATACGTTCCCAGCAGGAACAGGGATACTATAGAAATGACGGTACCTATGTTCCAGAAAGTAGAAAACCAATCATTTGGTGTTGTCCCAAATGCCGATACGACTATAAGCCTGATGAAGTACCGAAACTCTATACATGTTTTTGTGCAAAGGAATTAAATCCTCCTCATCATCCGTGGCTTATACCACATTCATGCGGAGAAGTATGTGAAAAGTACTTAGTACCTGAGTGTGGACATAAATGTCTGCTTCTCTGTCATCCAGGTCCGTGCGCTCCATGCCCGCAAAATGTTATGACGTCTTGTAAATGTGGTCGATCCAATGAAAAGTTGACACGATGCTTTCAAAAGTCATGGACTTGTGAAGCAAAGTGTCAGCGTATTTTAAAATGTGGAATTCATAAATGCGAGCAGTTGTGTCATGAAGAAGGAAGATGTGCACCATGTTCCAAAAAAAGCAATCAGCCTTGCGAATGTGGTCAAAAAATGATGTCAAGAAATTGTTcagatttaaaatggaaatgtTCAAAAatatgtaatagaaaatttagcTGTGGTTTACATAAGTGTCAAGTAGTTTGCCATGCTGGCGATTGCGGAGAATGTCCAATGGGATTGCCGAGAACATGTCCCTGTGGCAAGAAGACCTCACAAGCCCCATGCAATGAAGAAATCGACAGCTGTGGAGACACCTGCCAGAAATTTTTATTGTGTAACACTCATGTCTGTGCACAACGATGCCATCGTGGTGAATGCGGTGCTTGTTTGATTATTGTAGAAAAAAAGTGTCGCTGTGGTCAACATTCAAAAGAATTACCATGCTCGAAATCTTTTACTTGCGAAATGAAATGCAAACAAATGAAAGATTGTAAGAAGCATGTCTGCAACAAAAAGTGCTGTGACGGACAATGCCCTCCGTGTGATAAAATTTGCGCAAAAACATTGTCATGTCGTAAACATAAATGTAAATCGGTATGCCATGACGGACCATGCTATCCATGCGAATTAAAGTCCCAAGTAAAATGTCGATGTGGATTTAATAGTTTAACAGTACCATgtggaagagagaaaaaaatacgTGCTCCTAAATGTAATGAGCTATGCAGaTTACCCGTGAAATGTCATCATAAAAATCCGCACAAATGTCACTGGAACGATTGTCCACCATGTAATCAACAATGTAATTTACCAAACGATACATCACAGTGCGGTCATGTTTGTCAATCAAAATGTCATGACGCTGTTAAAGTATTTATTACTGAGAAAACTAGCACGTGGGATTACCAACAGGATGCGtaCGAATTGAAAAAACTACCGCATCCACGATGTGAAATAAAAATTCCTATTGAATGCATTGGCGGCCACGAAACTGTCCTATTGCCTTGTTGGAATGCTAAGACGTCCTCATGTGGTCGTATCTGCGGCCGCAGTTTAAGCTGTGGCAATCATGTATGCGAAAGAGAATGCCACTCGGTTCCAGATGTAAGAGAAAAACTGGCGCAGGCTGGATGTCAGCAATGTAATCAGGGATGTAAAATTGCACGAAATTCGGGATGCATTCACCCATGCCAAAAACAATGTCATAAACCACCATGCGAACAGTGTGTGGCTGTGCTCAAAGTTAATTGCCACTGCGGCCTAACACAGCTTTTTTATAAATGCTCTGAATATTACAAAGAAAATATGGAAGAGCCTCAGGAGAAATTGAAATGCTGTGGTAATCGTTGCATTAAAAACtacaCTTGTGGACATCGTTGCTCGTCATTATGCCATTCTGGCAGCTGTCCCGATTCTGAAAAATgcagaaagaaaattaaaatatattgtgACTGTAAGAATTTAAAATCCGAAATTAGTTGCGATAAATATCGAAATGGATCAACTTCGATTCCTTGTAACGAAACTTGTGtgttgaaaaaagaaaatcaagaGCGCATGGATCGTGAAGAAGCAGAAAGATTACGTAAAATTGAAGAAGAACGTAATCGATTGGAATTAGAgcaatttgaaaagaaattcgGGAAGAGAAAATATCGCGAAAAGAAATCCGTGGAAACGATCTCAACTGATAATAGAAACATAAAAAAGTGGTTAATTTTTGGATGCCTTATTACAGTAATTATTGCAGTCGTGGTAATGTTTATATTGAAATAA
- Protein Sequence
- MSNNLQKRKNKNDKNAKIKDVTNPQTGVVNSKFEVIHSRNIDKAKMLAQVCDSSSDEEELNDDKILSSVFKNYVEDGNQLEKFKSFLDNFFQSGFAICLICIGTVKRVDAIWSCKNCYCFFHLTCIKRWGNDSISTQKIRSQQEQGYYRNDGTYVPESRKPIIWCCPKCRYDYKPDEVPKLYTCFCAKELNPPHHPWLIPHSCGEVCEKYLVPECGHKCLLLCHPGPCAPCPQNVMTSCKCGRSNEKLTRCFQKSWTCEAKCQRILKCGIHKCEQLCHEEGRCAPCSKKSNQPCECGQKMMSRNCSDLKWKCSKICNRKFSCGLHKCQVVCHAGDCGECPMGLPRTCPCGKKTSQAPCNEEIDSCGDTCQKFLLCNTHVCAQRCHRGECGACLIIVEKKCRCGQHSKELPCSKSFTCEMKCKQMKDCKKHVCNKKCCDGQCPPCDKICAKTLSCRKHKCKSVCHDGPCYPCELKSQVKCRCGFNSLTVPCGREKKIRAPKCNELCRLPVKCHHKNPHKCHWNDCPPCNQQCNLPNDTSQCGHVCQSKCHDAVKVFITEKTSTWDYQQDAYELKKLPHPRCEIKIPIECIGGHETVLLPCWNAKTSSCGRICGRSLSCGNHVCERECHSVPDVREKLAQAGCQQCNQGCKIARNSGCIHPCQKQCHKPPCEQCVAVLKVNCHCGLTQLFYKCSEYYKENMEEPQEKLKCCGNRCIKNYTCGHRCSSLCHSGSCPDSEKCRKKIKIYCDCKNLKSEISCDKYRNGSTSIPCNETCVLKKENQERMDREEAERLRKIEEERNRLELEQFEKKFGKRKYREKKSVETISTDNRNIKKWLIFGCLITVIIAVVVMFILK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -