Ctib014132.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- stc
- Assembly
- GCA_963669355.1
- Location
- OY770262.1:285210091-285212520[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.5 3.7e+04 -3.7 1.6 15 19 335 339 334 339 0.81 2 12 0.055 1.4e+03 0.9 0.2 4 10 368 374 367 375 0.94 3 12 6.5e-05 1.6 10.2 16.4 4 19 382 397 380 397 0.93 4 12 2e-05 0.5 11.9 14.2 3 19 435 451 423 451 0.89 5 12 5.6e-09 0.00014 23.2 15.0 1 19 491 509 491 509 0.98 6 12 7.4e-05 1.8 10.1 15.6 4 18 557 571 550 572 0.88 7 12 0.0041 1e+02 4.5 8.4 1 11 612 622 612 623 0.96 8 12 9.2e-10 2.3e-05 25.7 13.6 1 18 639 656 639 657 0.97 9 12 0.53 1.3e+04 -2.3 0.5 6 10 686 690 686 697 0.55 10 12 2 4.9e+04 -9.7 13.1 7 18 701 713 693 714 0.72 11 12 2.7e-08 0.00066 21.0 14.1 1 16 750 765 750 776 0.92 12 12 6.8e-08 0.0017 19.7 11.4 1 18 782 800 782 801 0.90
Sequence Information
- Coding Sequence
- ATGGCGGGCTACACGCCCCCCAATCAGGACGATCGGAACGGAAGGAGTGGCTACGTCGACTTCAACCAGTTCATCATGCAACACAACCTGGGCAATTCGTTCGGATCGTCGTTCAACGATTTCTACAGTGAGCAGGTGCCTTACATGCCGACGACTATCGAGTACAACGTTTTCCAGCCGGAACGGCAGCAGCAACCCACACCGCCGACACAGCAGCCTACTAATGTGTTGTTCGGTCAGCAGCAAGAGATCGCCGCGGCCTCGAACTTGGCCGCGACCGCTGCCGAGTTCATTCCACGCTTCAACAACATTAGCATAACCGAGGGTCAGCCACAGGTGGATTTTTCGTACTCAGCGGGGGATAATGCACGGGTGGATCAGCGCGAGCCTCGTTCTAATCGGAACCGAAATACCGGCGCTATAAGCAAAAGAGCGCATAATCACGGCCGCAATCAGTACTACGATCGGCAGCGCTATGAGCCAAATGGCAACGGAAACCATTCGGTCAATGCGCGCTTCAATAACCATCGCTCGGAAAACAACGGCTATCGTTCGGAAAACAACGGTCATCGCTCGGAGAACAATGGTCACCGCGGTGAGAACAGCATCCATCGCTCGGAGAACAACAGCCGCAATAATCGACGGCGCGACAACTGGCGTAATTACAAAGACTCGCCACCCTCGCCTCAGAAGAAGCAACCGGACACGAACTCAGTGACTAGCCAAGACGGCTCTCCGAAGCACTCCGACTTCGAAGCAGGCGGCGACACGGCTCGCCGCAGCTCGTCCAAATCTTCCGAGACGAACCTCGTCGATTCGAAATACTCGCAACGTGAAAAGCTGATACGCGAAATTGAGTCGCGCAAACTCGAGTGCCTCGTTTGTGTCGAGCCCATAAAACCACATCAGGCGATCTGGTCCTGCTCCAACTGCTTTCACATTCTGCACCTCCTGTGCACCACGAAATGGGCCTCAAGCTCGAAATCGACGGACGGCTGGCGTTGTCCAGCCTGCCAGAATGTCACGAAGTCAATTCCGCGCGACTATTTCTGCTTTTGCGGTAAGGTCAAGAATCCGCAGTACAATCGCAGCGATACAGCACACAGTTGCGGTGAGCCGTGCGGTCGCAAGGACTTATGCCCGCATCCGTGCACACTTCTCTGTCATCCAGGACCGTGCGCGCCGTGTCAGGCGATCGTCATCCGAGAATGCGGCTGCGCCAAAACGACCAAATCGATGCAATGCTGCATCAAGGAGGAGCTGCAGTGCGACTCGAAATGCGGCAAGCTGCTCAACTGTGAGCTTCATACATGCGACGAGGATTGCCATCGCGGACGCTGCCCTAATTGCAAGCATAAGATCGAGCAGCAATGCTACTGCACAAAAATCGAGCGTCAGGTGGCTTGTACGCGCGAATCGAACGACAAGAAACAATTCTCGTGCGGCAAGCCGTGCAACAAGTCGCTCTCCTGCGGCAACCACAAATGCAAGGACAACTGCCATTCGGGCGAATGCAAGCCGTGCAAGCTAACACCGACCGTTGTCACGTCGTGTCCCTGCGGAAAGATGCCCGTGCCGAATGCGGAGCGAAAATCATGCCTGGATCCAATCCCCGTGTGCAACGGGACTTGCGGTCGAACACTGAAATGCGGTCCACCATCCGCTCCTCATCACTGCTCCAGCAAATGCCACATTGGCAATTGTCCGCCGTGCAACAAGCAAACGGCCGTTCGCTGCCGCTGCGGAAACATGGACCAGATGATCAAGTGCCGGCAGCTGGTAACACGGGCGGACGATGCTCGCTGCAAGAAGCGCTGCACGAAGAAACGCAGCTGCGGAAAGCATAAGTGTGCACAGGAGTGCTGCATCGATATCGATCACATCTGCACGATGCCGTGCAATCACACGCTATCGTGCGGTAAGCACAAGTGCGATCAGCCCTGCCATCGTGGCAATTGCGCTCCGTGCTATCGCAGCTCGTTCGACGAGCTGTTTTGCGAGTGCGGCACAAACGTTATCTATCCACCGGTGCCGTGCGGAACTAAACGCCCGGTCTGCACGCAACCGTGCACGCGCCAACATCCGTGCGAACATCGCGCCCAGCATAATTGCCATTCGGCTCCGACGTGTCCACCGTGCATCGTCCTGACCACGAAATACTGCCACGGCCGACACGAACAACGCAAGACGATCCCATGCAGTCAGGCCAGTTTCAGCTGCGGTCTGTCATGCAACAAAGACTTGAGTTGCGGTCGACACAAATGTATCAAGCCGTGCCACGAAGGTCCTTGTCAGGCGGCTGGCGAATTATGCAAGCAAAGTTGCCAAGCGATTCGTCCGAATTGCGGGCATAAATGCAATGCTCCGTGTCACGAGGGCGATTGCCCCGACATTGCATGCCGCGAGAATGTAAGTATTGAACagttttaa
- Protein Sequence
- MAGYTPPNQDDRNGRSGYVDFNQFIMQHNLGNSFGSSFNDFYSEQVPYMPTTIEYNVFQPERQQQPTPPTQQPTNVLFGQQQEIAAASNLAATAAEFIPRFNNISITEGQPQVDFSYSAGDNARVDQREPRSNRNRNTGAISKRAHNHGRNQYYDRQRYEPNGNGNHSVNARFNNHRSENNGYRSENNGHRSENNGHRGENSIHRSENNSRNNRRRDNWRNYKDSPPSPQKKQPDTNSVTSQDGSPKHSDFEAGGDTARRSSSKSSETNLVDSKYSQREKLIREIESRKLECLVCVEPIKPHQAIWSCSNCFHILHLLCTTKWASSSKSTDGWRCPACQNVTKSIPRDYFCFCGKVKNPQYNRSDTAHSCGEPCGRKDLCPHPCTLLCHPGPCAPCQAIVIRECGCAKTTKSMQCCIKEELQCDSKCGKLLNCELHTCDEDCHRGRCPNCKHKIEQQCYCTKIERQVACTRESNDKKQFSCGKPCNKSLSCGNHKCKDNCHSGECKPCKLTPTVVTSCPCGKMPVPNAERKSCLDPIPVCNGTCGRTLKCGPPSAPHHCSSKCHIGNCPPCNKQTAVRCRCGNMDQMIKCRQLVTRADDARCKKRCTKKRSCGKHKCAQECCIDIDHICTMPCNHTLSCGKHKCDQPCHRGNCAPCYRSSFDELFCECGTNVIYPPVPCGTKRPVCTQPCTRQHPCEHRAQHNCHSAPTCPPCIVLTTKYCHGRHEQRKTIPCSQASFSCGLSCNKDLSCGRHKCIKPCHEGPCQAAGELCKQSCQAIRPNCGHKCNAPCHEGDCPDIACRENVSIEQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -