Basic Information

Insect: Chorisops tibialis
Gene Symbol: -
Assembly: GCA_963669355.1
Location: OY770262.1:220071422-220123907[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.081 9.1 8.4 1.1 3 23 289 311 287 311 0.92

2 15 3.4 3.8e+02 3.3 5.1 1 21 458 478 458 482 0.91

3 15 0.0041 0.47 12.4 0.5 2 21 504 523 503 524 0.93

4 15 0.051 5.7 9.0 2.6 1 22 541 562 541 564 0.89

5 15 0.37 42 6.3 0.5 1 23 569 593 569 593 0.90

6 15 0.54 60 5.8 0.2 2 23 607 629 606 629 0.96

7 15 0.001 0.11 14.3 0.1 1 21 634 654 634 655 0.95

8 15 0.47 52 6.0 0.3 1 23 706 728 706 728 0.94

9 15 0.48 54 5.9 5.9 2 23 740 760 739 760 0.95

10 15 0.00017 0.019 16.8 1.7 1 23 766 789 766 789 0.93

11 15 4.4e-05 0.005 18.6 4.2 1 23 805 827 805 827 0.97

12 15 3.7 4.1e+02 3.1 0.1 1 23 834 858 834 858 0.79

13 15 0.032 3.6 9.6 1.1 1 23 864 888 864 888 0.98

14 15 0.0016 0.18 13.7 1.5 1 23 895 917 895 917 0.98

15 15 0.0024 0.27 13.2 1.9 1 22 923 944 923 948 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.081	9.1	8.4	1.1	3	23	289	311	287	311	0.92
2	15	3.4	3.8e+02	3.3	5.1	1	21	458	478	458	482	0.91
3	15	0.0041	0.47	12.4	0.5	2	21	504	523	503	524	0.93
4	15	0.051	5.7	9.0	2.6	1	22	541	562	541	564	0.89
5	15	0.37	42	6.3	0.5	1	23	569	593	569	593	0.90
6	15	0.54	60	5.8	0.2	2	23	607	629	606	629	0.96
7	15	0.001	0.11	14.3	0.1	1	21	634	654	634	655	0.95
8	15	0.47	52	6.0	0.3	1	23	706	728	706	728	0.94
9	15	0.48	54	5.9	5.9	2	23	740	760	739	760	0.95
10	15	0.00017	0.019	16.8	1.7	1	23	766	789	766	789	0.93
11	15	4.4e-05	0.005	18.6	4.2	1	23	805	827	805	827	0.97
12	15	3.7	4.1e+02	3.1	0.1	1	23	834	858	834	858	0.79
13	15	0.032	3.6	9.6	1.1	1	23	864	888	864	888	0.98
14	15	0.0016	0.18	13.7	1.5	1	23	895	917	895	917	0.98
15	15	0.0024	0.27	13.2	1.9	1	22	923	944	923	948	0.93

Sequence Information

Coding Sequence: ATGTTGGAGGAAGACATAGATGATACGCATCTTTGCATAAAATGCAGTACCACCATCGTTGGCCTGGAAAACTATGTTCAGCATCGCAAAAACAATTGTTCAAGTAAAACCACGACCGTGATTTCTCGAGACGTTGTTCACGGCGTCGATCATCGATACAGAAGTTTCGATTTTACCGAAAGTTCGAGTTTCCATAAGCCCGAAGAGGTCGAAAAGTCGGCGAAATCGTTAAACGATACTTACGACCTACCTTACGATCTCGGAGCTGATGTCTTCTTTTCATCGCTGGAGCTGCAAAGTAGTTCGCGTAAAGCCCTCACCAATTCGGCAGCAATCTCGACTGGCGGTAAATACGGACCGAGTAGAGTCCTGACTAGAAAGGCCACCGCTGCACTCCTCTCGAATCAGGAGCACAACGATGGTTGGATAAGTGAAAGTCACAGTTCCGATAATCTCATGAAAGCTGTACGCGATATAAGCGGAAATAAGAAGTGTGACAGTGTTTTCAAATTGCTTTCGTTTCAACATGATTCGCCCGATCCGAGTGATGATGAAGATGACGATGATGAAGACTATGAAGTTCCTTCGACACACACAGGAGGTAAATGGAAACCCGATAATCCTCTACCGCCTTCGATTCTTCGAAATTCTCCAGCATGGGACGATAGGGCACAGTGGGATATTACCGAACCGAATAATGTGAAGCCGGCTGTGAAAACCCAGGACACTGAGGAATTCGAACATGATTTAATTCCACCGCCGAGTCATACGAAGGGTAAGTGGGTACCTGGaacgaaaattgttaaattgaacTACAAAGAAGAAGATGTGGAAATTGAGAAAATCTTCTCGGACCAGTACTGGTGCAATACCTGTAATAGAAAACTGACCACCAAATTACTGTACGAACGGCACGTTAGATCGAATCTACATTTAAAGCGTTCCGAACCAGAACAGGAACTCGAACAAGCATCGCATCCGATCCTTTTGCCGAAATTCTCCGAGCGTGTTAAGAAACGATCGATATACTTGAACGACATCCTGTACCAGGCCGAAAATATCAAAGTGGAAGAGAAGCAGTCCGGAAAGAAAGTCCGTAAACGTCGaaagtatttcattaaatgcGAAACATGTAAAATGCGACTTCCAAAACATCTACTCGGCAAACATCTCATCTCGCACTATCACTATCGACGTATGTCACAAAATCCTGTAAAATCTTTCGACTTGGTTCTCAGCAATATCGAGAAAATCGTCCAGCAGGCACCGTACCAATGCCATCCGTGTCGATTCTACACCAATACCCAGCAGGACTTCATCGACCACTGGAACTCCGCGGATCATGCCTATCTGGTCGAAGGACCCGGACGATTTTGCTGTAACTTCTGTAAATTCGAATGCGAGGATAACAATCAAATGCGACGTCATCTTCTCGGACAGGATCATCGAGAAGTTGACCTGGCCATTAATCGATCGTTTCCAATAATTATCGGGAAACGAACGATTATCGAGTGTCCAAAATGCCAGCAAGCGTTTCGTTACAATCTTGAATTACGAAAGCATGCGAAACACTGCACCTTTCAACCGGCCGGAACAGCTTCGAACGATTACCAATCAAAATTCGTTTGCGATACGTGCAATCTAACGTGCAAATCGCGTCTATCGCTTCAGAAGCACGAAGTTAATCGACATCAGAAACAACGGTACTTCTGTTCGGCCTGTAAGATCGACTTCAATTCTTCGGAAGATGCTAAGAAGCATCGAACTACGCCGGAGCATAAGATAGCTGCGGCCAAGAATACCACAAACTTAGCGAAGAAATGTAAGGCTTGCGGATCGATTCTGAAGGATCTGCTCGAACTCAAAGAGCATATGATTCGATTGCATCCCGATGTATATTTCCCGTGTCCGCATTGCGGGAAGAGATTTATTTTGCCACAAGAAGTCGGGCGCCATATTCGTGATAAACTTTGCCTGCCGTATATTTGCAAGGAGAGCCATCAGCCAACCGCGGTTTCATCCGAAGCTGTTGAGTTCCTCGGTAATACCGGACTGATGGTATCAGACTCGGCAATTACTCCAGTTAAAATGGAAGAGCCGACGAAGGCGAATGAATTCCGATGCACGCTATGTAATTACAGAGCAACCTTGAAAGCGGAACTACTGTATCACGAGATTTTACATTCTGCTGAAAATATCGATAAGGATACGAAGCTGCCATGTTCGGTTTGTCAGAAGATGTTTCGCAAACATTCATTGCGATGTCATTTACGGCAGCATACAAACGAGCGTTTGTTCGAATGCGATCAGTGTCCGATGAAATACTCGCGGAAGCATAATTTGAAAACCCATGTTGATAATGCGCACAGTGCAAGTGTTAAGGAAGAAGGACAACTGGCGAAGGTGACTTCGTTCCAATGCGATGCATGCGGCAAGTGTTTCAGTAAAAAGCACTCGCTGAAACAACACGTCATCGTGCATAGCGAACGCGATAAGAAATTCAAGTGTCGCACTGACGGATGCATTTTTATCGGACGAAATGCAAGCGATTTGAAGGAACATTTGAGCGTGCATACGAGCAAGCGAAGTTTCCAGTGCGATTATGAAGGATGCGATTACAAGGGGAAGAGTATGACTCTATTAAAGAGGCATAAAAAAATCCACAAACCTCTGGATAAGAAATTCACGTGCTCGCAATGTGACTTCAAGGCACGAATTCCAGGACATTTAAAGCGACATCTTCGAATTCATACCGGCGAAAAACCCTACAAGTGTCCTTATTGCGATTTCCAATGCAACGCGTCGGAGAACTTGAGGAAGCATGTCCTAACGACATCCCTTCATGCTGGTCGCGGTTTGTATGAGTGCTCATTTTGTGATCCAAACGATGTTTTTAAGACGAATTTTCAAAAAGAATATCGCGCTCATTTAGTCGTCTCGCATCGTTTAGATCGCCAAGGATTGAAGCTATGA
Protein Sequence: MLEEDIDDTHLCIKCSTTIVGLENYVQHRKNNCSSKTTTVISRDVVHGVDHRYRSFDFTESSSFHKPEEVEKSAKSLNDTYDLPYDLGADVFFSSLELQSSSRKALTNSAAISTGGKYGPSRVLTRKATAALLSNQEHNDGWISESHSSDNLMKAVRDISGNKKCDSVFKLLSFQHDSPDPSDDEDDDDEDYEVPSTHTGGKWKPDNPLPPSILRNSPAWDDRAQWDITEPNNVKPAVKTQDTEEFEHDLIPPPSHTKGKWVPGTKIVKLNYKEEDVEIEKIFSDQYWCNTCNRKLTTKLLYERHVRSNLHLKRSEPEQELEQASHPILLPKFSERVKKRSIYLNDILYQAENIKVEEKQSGKKVRKRRKYFIKCETCKMRLPKHLLGKHLISHYHYRRMSQNPVKSFDLVLSNIEKIVQQAPYQCHPCRFYTNTQQDFIDHWNSADHAYLVEGPGRFCCNFCKFECEDNNQMRRHLLGQDHREVDLAINRSFPIIIGKRTIIECPKCQQAFRYNLELRKHAKHCTFQPAGTASNDYQSKFVCDTCNLTCKSRLSLQKHEVNRHQKQRYFCSACKIDFNSSEDAKKHRTTPEHKIAAAKNTTNLAKKCKACGSILKDLLELKEHMIRLHPDVYFPCPHCGKRFILPQEVGRHIRDKLCLPYICKESHQPTAVSSEAVEFLGNTGLMVSDSAITPVKMEEPTKANEFRCTLCNYRATLKAELLYHEILHSAENIDKDTKLPCSVCQKMFRKHSLRCHLRQHTNERLFECDQCPMKYSRKHNLKTHVDNAHSASVKEEGQLAKVTSFQCDACGKCFSKKHSLKQHVIVHSERDKKFKCRTDGCIFIGRNASDLKEHLSVHTSKRSFQCDYEGCDYKGKSMTLLKRHKKIHKPLDKKFTCSQCDFKARIPGHLKRHLRIHTGEKPYKCPYCDFQCNASENLRKHVLTTSLHAGRGLYECSFCDPNDVFKTNFQKEYRAHLVVSHRLDRQGLKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -