Ctib015798.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- ZNF711
- Assembly
- GCA_963669355.1
- Location
- OY770262.1:325735924-325738744[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.24 27 6.9 0.2 2 23 186 208 185 208 0.93 2 16 1.2 1.4e+02 4.6 1.4 3 19 402 418 401 423 0.94 3 16 1.2 1.3e+02 4.7 0.3 1 23 476 500 476 500 0.95 4 16 0.045 5.1 9.1 1.0 2 23 506 527 506 527 0.96 5 16 0.14 16 7.6 0.1 1 23 533 556 533 556 0.92 6 16 9.2e-05 0.01 17.6 0.8 1 23 566 589 566 589 0.96 7 16 3e-05 0.0033 19.2 2.7 2 23 594 615 593 615 0.98 8 16 1.1e-06 0.00012 23.7 0.9 1 23 621 644 621 644 0.97 9 16 0.13 15 7.7 1.3 2 23 659 680 658 680 0.93 10 16 0.038 4.3 9.4 0.2 1 23 686 709 686 709 0.96 11 16 0.00059 0.066 15.1 4.1 2 23 720 742 719 742 0.96 12 16 3.9e-05 0.0044 18.8 2.1 1 23 748 771 748 771 0.98 13 16 6.1e-05 0.0069 18.2 1.9 1 23 775 797 775 797 0.99 14 16 0.019 2.2 10.3 0.1 2 23 804 826 803 826 0.97 15 16 5.1e-05 0.0057 18.4 2.4 1 23 836 858 836 858 0.99 16 16 0.19 21 7.2 1.6 1 23 864 887 864 887 0.96
Sequence Information
- Coding Sequence
- ATGACTCTTAGTGATCGCAACATCAGCGATGTCGAAAGTAACGTAAGTGAGAGATTTCGATCTGTCGAAGAAGAAAACACCAAtgcaactgaaaatttaaattttcaaattgtgaAAGAAGAATGTGATCATAACAACCATTTTATGGAAGATGATACACATGAGAAAGAATTAGAGCGCATCAAAATGctgtcaaattttcaaattgtagaaaAAGGGTGTGATCCTGAGTTTCAAGCAACTTTGAAACAAGAGCCTGATCATAACAACCCTATTATTAGAAATAATGCAGGTCAAAACGAACTAGAACTCAACCAAAACTCATCAAATTTTGTAATCTTGGATGAATGCGCTCCGGCATATCAAGTCATTTTCAAAACAGAGGCTGATCAGAACAACcttataaaagaaaatacaaatCAGGAAGAATCAGAATTCAGCGCAATATCGTCAAATTTGCAAATTGTCGAAAAAGAATGTGTCCCGGATTTTCATGTGGCATTTAAAACAGAACCTGAGCTAGATATTGGTGTAGATTGCAATGACGAGCAATTACAGTGCTCGGCTTGTTTAAAACAGTTTGAATCGCTTGATATGTTCCGCGATCACATAGTATCTGACCATTTAGAAGAAAACATTTGCAATCTTTGCAATCAAGAATTTGAATGCAGTCAATTCGAACATTCAGCCAAACATCTTCCATTAGACTACAAAGAACATATGGAAATAGAACACAACGAAAAATCCCGGCACGGCGAAACATTAAACGGGCATATGAAAGCAATACACAATGACGAATTCTTTGGCGAGTCTGACAATAGAAATGAGGAAGAATTAGTATTCAGCGAAATAtcgtcaaattttcaaattgccaCAGAAGAATGTGTCCCAGATTTTAATATGGCTTTTGAAACAGAACCTGAGCTGGATATTGGCGTAGATTGCAATGACGAGCAATTGAAGTGCTCGGCTTGTTTAAAACAGTTTGAATCGCTTGATATTTTCCGCGGCCACATAGTATCTGATCATTTAGAAGAAAACATTTGCAATCTTTGCAATCaagAATTTGAATGCAGTCAATTTGAACATTCGGCCAAACATCTCCCATTTAGCTGTTTGGTGGCAAACAAACCGGAGAATCCATCTGGCGCAAGTGAAGAGTCAATAAGACAAACTGAAAAATTGCAAAGCACTGTAAAATTCTGTCAGCATTGCTCAATGCATTTTGAAGACTTAAACATGTTAAGAATGCATGATAGTGTTGAACATAGCGAACTGAAATTGAAATGTTCCGTTTGCGAGCAAAATTTAGCTGACGACCGATCCGACTATGACGATCATATGAAAATAGAACACAATGATCATATTGAGCAAACTACAAATGAACAGTCAAAGTGTGATGATACTGATACCGGTAAAAAACAATTTCCATGCTTGATTTGCCCGAATGAaagtttcgaattgaaaaaagagTTATCGGAACATAATCGAAAATACCATTATAAGTCTAGAGAGCAATGTACTGAATGTTTCGTAACTCTAAGTCAGAAAAATCTTTTGTCGCATATGAAAACCGTTCATAATTGCGAAAAGCCGTTTGCGTGTGAATTATGTGGTGCCCTCTATCAACGGAATCACGGCTTAAATCTTCATATAACGGCAGTACATGACAAATCTTATAAAGGAAAAATGCAATTTCAATGTGCATTATGCAAGGAAAAATTCCCGCAAAACAAAACATTGAAAGAGCATATGAAAGAAATACACAAAGACGATATCCAATGTACGATCTGTTCAAAAGTTTTCACTCGTCAATGCCGTTTAATAAATCATGTGCGTactcataccggtgaaaaaccgtttgaCTGTGAACTATGTCCGAAAAAGTTTGGAAATAATTCTGAGCTGAAACGTCACATACGAAAAAACCACACAGAAAATATGAGTAGTGATGATAAACCAAAACAAAACTTGCAGTGTATTATTTGCTACGAAGTTTTCGATATGAATAACAAATTAAGAAGTCATATGCATAGTCATAtcggtgaaaaaccgtttcaatgCAAATCATGCCCGGGCATATTTCAACGTATCCAGGCACTTCAAATCCATATGCAAGCAAAACATACAGATCAAGGGACTGAAAAGACAGATCTTAAGTGCAATATTTGCtcgaaagtttttgtttttgagcaCAATCTAAGCGATCATATGCATCGTAAACATGCTCGCgaaaaacattttcaatgtACATTGTGCAGTAGAAATTTCCGAACCTCTTGGTCGCTCGACAGTCATATGCGAAAGCAACACTCAAGTGTTTTCAAATGTACCGATTGCTTTGCATTGTTTGCCTCTAAACATCTTCTTATTAGGCATATGCGTATCCATAACGCCAGGAATCCAGTACAATGTGAATTCTGTCCAGAAAAATTCATAGGCAACAGACCGCTGAGAATCCATGTACAAACGAAACACCCAGATAATTGGACTGGTGAACCCGATTATAAATGTGCAATTTGTTCGAAAGTTTTcggctttaaacataatttaacAGGTCATATGTATACTCATACCGGGAAATACCCGTTCAGATGTCAAATTTGCTTAAAAATCCATCGATCTAAAATCAGTTTGGCCGAACATATGAAATGGAAACATAATCATATTGCTGATACAGTGCCAGCAATTTTTTAG
- Protein Sequence
- MTLSDRNISDVESNVSERFRSVEEENTNATENLNFQIVKEECDHNNHFMEDDTHEKELERIKMLSNFQIVEKGCDPEFQATLKQEPDHNNPIIRNNAGQNELELNQNSSNFVILDECAPAYQVIFKTEADQNNLIKENTNQEESEFSAISSNLQIVEKECVPDFHVAFKTEPELDIGVDCNDEQLQCSACLKQFESLDMFRDHIVSDHLEENICNLCNQEFECSQFEHSAKHLPLDYKEHMEIEHNEKSRHGETLNGHMKAIHNDEFFGESDNRNEEELVFSEISSNFQIATEECVPDFNMAFETEPELDIGVDCNDEQLKCSACLKQFESLDIFRGHIVSDHLEENICNLCNQEFECSQFEHSAKHLPFSCLVANKPENPSGASEESIRQTEKLQSTVKFCQHCSMHFEDLNMLRMHDSVEHSELKLKCSVCEQNLADDRSDYDDHMKIEHNDHIEQTTNEQSKCDDTDTGKKQFPCLICPNESFELKKELSEHNRKYHYKSREQCTECFVTLSQKNLLSHMKTVHNCEKPFACELCGALYQRNHGLNLHITAVHDKSYKGKMQFQCALCKEKFPQNKTLKEHMKEIHKDDIQCTICSKVFTRQCRLINHVRTHTGEKPFDCELCPKKFGNNSELKRHIRKNHTENMSSDDKPKQNLQCIICYEVFDMNNKLRSHMHSHIGEKPFQCKSCPGIFQRIQALQIHMQAKHTDQGTEKTDLKCNICSKVFVFEHNLSDHMHRKHAREKHFQCTLCSRNFRTSWSLDSHMRKQHSSVFKCTDCFALFASKHLLIRHMRIHNARNPVQCEFCPEKFIGNRPLRIHVQTKHPDNWTGEPDYKCAICSKVFGFKHNLTGHMYTHTGKYPFRCQICLKIHRSKISLAEHMKWKHNHIADTVPAIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -