Basic Information

Insect: Chorisops tibialis
Gene Symbol: -
Assembly: GCA_963669355.1
Location: OY770264.1:129467793-129488332[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.73 82 5.3 0.4 1 23 738 761 738 761 0.89

2 13 2.1 2.4e+02 3.9 1.6 1 23 862 884 862 884 0.93

3 13 0.00045 0.051 15.4 2.4 2 23 887 908 887 908 0.97

4 13 1e-05 0.0011 20.6 0.2 1 23 914 936 914 936 0.97

5 13 0.00025 0.028 16.3 1.2 2 21 943 962 942 963 0.93

6 13 3.2 3.6e+02 3.3 0.3 5 23 978 996 975 996 0.96

7 13 0.0024 0.27 13.2 2.6 2 23 1002 1024 1001 1024 0.96

8 13 0.15 17 7.5 0.5 2 23 1035 1055 1034 1055 0.96

9 13 2.9e-05 0.0033 19.2 1.1 1 19 1061 1079 1061 1080 0.96

10 13 0.00015 0.017 17.0 1.5 1 23 1091 1113 1091 1113 0.99

11 13 0.00013 0.015 17.1 5.4 1 23 1119 1141 1119 1141 0.97

12 13 8.3e-05 0.0094 17.7 3.8 1 23 1147 1169 1147 1169 0.99

13 13 0.013 1.5 10.8 5.6 1 23 1175 1197 1175 1198 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.73	82	5.3	0.4	1	23	738	761	738	761	0.89
2	13	2.1	2.4e+02	3.9	1.6	1	23	862	884	862	884	0.93
3	13	0.00045	0.051	15.4	2.4	2	23	887	908	887	908	0.97
4	13	1e-05	0.0011	20.6	0.2	1	23	914	936	914	936	0.97
5	13	0.00025	0.028	16.3	1.2	2	21	943	962	942	963	0.93
6	13	3.2	3.6e+02	3.3	0.3	5	23	978	996	975	996	0.96
7	13	0.0024	0.27	13.2	2.6	2	23	1002	1024	1001	1024	0.96
8	13	0.15	17	7.5	0.5	2	23	1035	1055	1034	1055	0.96
9	13	2.9e-05	0.0033	19.2	1.1	1	19	1061	1079	1061	1080	0.96
10	13	0.00015	0.017	17.0	1.5	1	23	1091	1113	1091	1113	0.99
11	13	0.00013	0.015	17.1	5.4	1	23	1119	1141	1119	1141	0.97
12	13	8.3e-05	0.0094	17.7	3.8	1	23	1147	1169	1147	1169	0.99
13	13	0.013	1.5	10.8	5.6	1	23	1175	1197	1175	1198	0.93

Sequence Information

Coding Sequence: ATGTATCTGCCTCCCAACGACTACTTCCGCCTCGCAATGAAGGCTTCGCGGTATCGCGTAACTCCTCAGattttcacCTTAGCACATCACAACCAAAATAAAGCTCTTCCTCCTCCACCGGCGTACGGAACCGCAATAAATCAGCTTCGATCTCAACAGAATCAAAATTCGATTAGTTTTCAAAGTCAACCATTGCCACCACCATCATCGACGCTTCGACCACCATCATCTCATGTTCGACCGCCATCTAACCCAACTGCATTAGATTTTGCTATGCCGAGGAATTTAACGCCACGACCATCCCCTTCACCATCAGTTCTCCGTTACGCGGAAAGTCCGGTGTCAGCGCATTATGTCGAACGTGAAAACGGTGACTTTATCGTTCAGGAAACACCGCGACACGTTGTCGAATGCGTTGAAAAAGACAATGGAGAATTTTCCGTAATCGAGAAAGTGATCCAGTCGCCGCCAAGTGTTGTTCAATTTAACGAAAGTGATAATGATGAAAGCATTCTACCGGATTTTCTTGATAGTAACGTAGAACCGACTGAAAATCAATTATCCGATGACGATGACGTGCAGACAGAAACGGACGCGTCTAATAAAGCAAGTGTTTTAGGCGTTACAGTTTTAAGTAATGTTAAACTAGATGCCAATGAATCTTTAGAATTAATGGAAAACCTAGGAAATATGAACACAACTCAAGCCGAAATCATCTGGTCCGGTTTGGCTGAAATCAAGAAGGAAAATAACGTGAAAGAAAGCGATATTTTGGAAAATTACGAAATAGTATGCAAAGAAACCGAACAAGCATGTTCGTCCGCGACAAGTGTTATACGATTAGCTAGCAATAATGCATCTGCTAGTCATAAAGAAAAGGGAAATCCTGTTAAACAAGTAAAAAATGCGCGAGAACTGCCTCCTATGAAACGAGTCTTTAGAAAACATCCTAAGAAATTGACTGTTAAATTCAAAGTGGCAGTACCGGCAACCGAAGCCGTTTCCAGTGATGTAATTGATGATTTAGGGACAAGTTCAACCACAACTCAGGTTCAATCTAACGTAGACTTAGTCATAGCAGAAGAAACATTACCCAAGTCAGAGGATCTAACAATATCAAGCAATAGTAGCTCTCAATTGTTGCAGGAGCCCGAACAGAAGGAACCCGCATTCCAATCCAAAAATGGTGATAGCAAATCAATCGTAAACGAACAAATAAATCATGTAACTGATGAGACTGACGTTAAACCGGTTCAATTAGAAATAGCACATCCCATGATTGTACACGAACCATCGCTAAGCCAAGAGCCGAATTTTGAACTAAACGCAGAGTTTTTGGCTCCTAAATTAATGCAATCATCGTTATCACCCCTAATGCTGTCATCATTGCCAGCAACTATACAATTCGAACAAACGACTGAACAAAGAGAATTAGAACTATCAAAACTACTAGACGAGTGTGTCCGTAACGAGAAAAATCAATCATATCCACTTTCCTCGACGTCAACTACAACCACAAACACTTCTTCCGATGCCGATAAGACCTCATCAACAAATTACACCGACGACATTGTCAATTCGGAATCACCAAAAATCGTCGCCGATTCGACAACATTTAATTCGTTTCCATCAACAACGGTTAATTCATTTTCGAAACCGTCGACAAGTTCCTTTGCTTTACGCGAACAACAGCAGATACAGTCAACTGAATACAATGCGGAGTATCCTTTCGGCCTGCTATACGGCTGCGCTAATGCTGCTGAAGATCAACCGTGGAGTCGCTACATTATGCAACAGCAAATGCCACAATTACAGGAGCTGGAGTCCGAGAGGAGTAGCTATATTGATCTGGATACTTATAAGATTACAAGTTGTGACGTCACGTCGATCCCAAACGCTTTAAATATACGTACAGATGAAAAAATGCCAGCGAAGGGTGAGATTTCAGAGCAAGAGAGTACCGGTGATGTCGAAAATTCATGGAGTAATCCACATTCCGGCTTCCGAATCATAAATACGTACGAAGAATACACAAAGGAACTGAGTGAGATCTGGAATGGTAGTAACGATGAAGCTGTGCCGTACTCGCATAATTTTGCTTCGGGATTGAAAGCGACTGCGCCACAAGATGTCAGCGAAATCGAAGAAGTGAAACCAATTACAGAATCttgtataaaaattgaaaaagtcaTTACACGCAGACCGAAACAGTTCCAATGTGCTCACTGCGGAGTCCGTTACCCTCTTTTAAAGGAACGGAACGTTCATCTTATCGAAAAGCACGGCTACAAGCGTGTTAATCGTCGACTAGTTCGTGATATGCCACCATCGACAGTAACCACCGAAACTCGTATTCCgacatccgatgtaccagatgAAAATAATTTGGCAGTCGAGGATATAAAGCCCGAAGTTAAACCGGAAATAACTTTGACAAGCACAGTCGATGCCACTGTATTTCCACGCACCAAATACGATTCTATTCGAGCCGGTGTTTATCGGATGCTCATGAACTTCAATTTAAACGTGCTACAAGAAACGAAAAGTATTGAAGTCGACAAAGCGTATTTCGAATCGAAATCGTTTTGTTGTTTTGTGTGCAAGCGTGATTTCATCAGTGTGAAGTTGTTTGACGAGCATTTAGCTGAGCACCCGGCCGAATGTTTTACATGCGGTCGGAAATTTACACGCTGGACATATTTTTCGTTGCATTTAAAGCGGCATTTGGGCTGGAAAGATTTCGCATGTACGGTATGTGATAAGAAGTTCGTGATACGAAGTGCATTGATCGAGCACATGCGAATGCACACCGGTATAGCGCCGCTTAAATGCACCCAATGCGAGAAGCAATTCAAACGATACTCAAATCTTGCGCAACACAAAAAAGTGTGTCTTAGCGCAAGACTAATCAAAAAGAAAGACTACGTGTGTCACTGCGGTGAAGTGTTGCCTTCGAAGGCGCGCTTCATTTGGCACAAGGAAACGCATGAAACCAAACCGAAAGTATGTCCTTACTGTCGCGATCGGTTTGTCCATCGAAACAGTTTGAAGCGACACATACGCCTTACACAttcagaaaaattcaattatgtgcAACCTGTTAAGTGTAAAGTTTGCAAGCAAGTATACGCAAAGACGAGCATGAAAGCCCACATGGTAACGCACTCGATCGACACGCAGCACGAATGCTCCATCTGCAATAAGTCGTTCACGACAAAATGGAATCTGAAAATTCACAATTGGGTACATGCGAACCGCACCGCGAAACCGTTCAAATGCGAGCATTGCGTTAAGGCTTTCGTACGCGAAATCGATTATAAAAATCACATCAATTCGCATAAGCATATAAAACCGTTCACGTGCGAATATTGCGGCTGCAAGTTTAtacgaaaatataattatatgCGCCATCGGCAGGAACACACCGGTCAAAAACGCTTCAAATGCGACTTGTGCGGTAAATTATTCCATCGAAATTACTATCTGATTGAACATCGGCGCACACATACCGGCGAACGACCGTTCCTATGCACGATATGCGGTAAAAGTTCAACAACAAAAACTAATcataataaacatttaaaaattcatcATTCACGTGATCCGTTTACGTCTGAGGCGTAG
Protein Sequence: MYLPPNDYFRLAMKASRYRVTPQIFTLAHHNQNKALPPPPAYGTAINQLRSQQNQNSISFQSQPLPPPSSTLRPPSSHVRPPSNPTALDFAMPRNLTPRPSPSPSVLRYAESPVSAHYVERENGDFIVQETPRHVVECVEKDNGEFSVIEKVIQSPPSVVQFNESDNDESILPDFLDSNVEPTENQLSDDDDVQTETDASNKASVLGVTVLSNVKLDANESLELMENLGNMNTTQAEIIWSGLAEIKKENNVKESDILENYEIVCKETEQACSSATSVIRLASNNASASHKEKGNPVKQVKNARELPPMKRVFRKHPKKLTVKFKVAVPATEAVSSDVIDDLGTSSTTTQVQSNVDLVIAEETLPKSEDLTISSNSSSQLLQEPEQKEPAFQSKNGDSKSIVNEQINHVTDETDVKPVQLEIAHPMIVHEPSLSQEPNFELNAEFLAPKLMQSSLSPLMLSSLPATIQFEQTTEQRELELSKLLDECVRNEKNQSYPLSSTSTTTTNTSSDADKTSSTNYTDDIVNSESPKIVADSTTFNSFPSTTVNSFSKPSTSSFALREQQQIQSTEYNAEYPFGLLYGCANAAEDQPWSRYIMQQQMPQLQELESERSSYIDLDTYKITSCDVTSIPNALNIRTDEKMPAKGEISEQESTGDVENSWSNPHSGFRIINTYEEYTKELSEIWNGSNDEAVPYSHNFASGLKATAPQDVSEIEEVKPITESCIKIEKVITRRPKQFQCAHCGVRYPLLKERNVHLIEKHGYKRVNRRLVRDMPPSTVTTETRIPTSDVPDENNLAVEDIKPEVKPEITLTSTVDATVFPRTKYDSIRAGVYRMLMNFNLNVLQETKSIEVDKAYFESKSFCCFVCKRDFISVKLFDEHLAEHPAECFTCGRKFTRWTYFSLHLKRHLGWKDFACTVCDKKFVIRSALIEHMRMHTGIAPLKCTQCEKQFKRYSNLAQHKKVCLSARLIKKKDYVCHCGEVLPSKARFIWHKETHETKPKVCPYCRDRFVHRNSLKRHIRLTHSEKFNYVQPVKCKVCKQVYAKTSMKAHMVTHSIDTQHECSICNKSFTTKWNLKIHNWVHANRTAKPFKCEHCVKAFVREIDYKNHINSHKHIKPFTCEYCGCKFIRKYNYMRHRQEHTGQKRFKCDLCGKLFHRNYYLIEHRRTHTGERPFLCTICGKSSTTKTNHNKHLKIHHSRDPFTSEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -