Basic Information

Insect: Chorisops tibialis
Gene Symbol: -
Assembly: GCA_963669355.1
Location: OY770263.1:192931407-192944286[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.9e-05 0.0021 19.8 4.3 2 23 240 262 239 262 0.98

2 10 5.3e-05 0.0059 18.4 1.2 1 23 268 290 268 290 0.99

3 10 8.9e-07 0.0001 24.0 0.8 3 23 299 319 298 319 0.98

4 10 2.2e-06 0.00025 22.7 0.5 1 23 325 347 325 347 0.98

5 10 0.013 1.5 10.8 1.1 1 23 353 375 353 375 0.98

6 10 0.0035 0.39 12.6 4.0 1 23 381 404 381 404 0.95

7 10 0.028 3.1 9.8 0.3 3 23 412 434 410 434 0.91

8 10 6.7e-06 0.00075 21.2 0.3 1 23 440 462 440 462 0.98

9 10 0.00017 0.02 16.7 0.6 2 23 469 490 468 490 0.96

10 10 0.0017 0.19 13.6 0.1 1 23 511 533 511 533 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.9e-05	0.0021	19.8	4.3	2	23	240	262	239	262	0.98
2	10	5.3e-05	0.0059	18.4	1.2	1	23	268	290	268	290	0.99
3	10	8.9e-07	0.0001	24.0	0.8	3	23	299	319	298	319	0.98
4	10	2.2e-06	0.00025	22.7	0.5	1	23	325	347	325	347	0.98
5	10	0.013	1.5	10.8	1.1	1	23	353	375	353	375	0.98
6	10	0.0035	0.39	12.6	4.0	1	23	381	404	381	404	0.95
7	10	0.028	3.1	9.8	0.3	3	23	412	434	410	434	0.91
8	10	6.7e-06	0.00075	21.2	0.3	1	23	440	462	440	462	0.98
9	10	0.00017	0.02	16.7	0.6	2	23	469	490	468	490	0.96
10	10	0.0017	0.19	13.6	0.1	1	23	511	533	511	533	0.95

Sequence Information

Coding Sequence: ATGTGGAACTCCCTAAGTAATATTAACTTTTACGAAAACTTATTGACGAAAAAGAGTGCAGCAGGATTGCCGGTGACCGACGATGAAGTCAATTTCGAGAAGATTTGCCGAACCTGCTTGCGGGAAGCGCCCGACACGGACAATTTACTAAAGGAATTCGAAATAGGAGCCATCAATTTTAATATGGATGGGAAAATGCTGAAACTAATCGATATGCTGGCCGAATCTACCTGTCTGGAGgtgACTGAAAATGATTACCTACCACATCAAATATGCAACAACTGCATTCAGAACATAAGCGGTGCATACTTCTTCCGTTTGCAATGTCACAAAGCCGAAAATATGTTGTATCGGTTGCAGAATGCACTCTCCGATATCTCAACACCAGCTAAATCGCAAGAAGAACAAGAAGAAGAGTTCGCACTTCAGAATGAGGAAGAGTCCATTTCTCAGATCACGGAAGATGAACAAATGACTTCCGAGAATGGCTACGACTACGATAaagaaatgaaaatcgaattagaAGGTAtcgaatataaaattaattcggAAATCAATGATGAAGACGATGAATCAATTTTGGAAGAATATTCGGATAATGAGAAGGAAATTTTGGAAGATTCTTCGCCTGTGCAAAACTTCCAAATCGAAATCGTCAGTCCACCAATTCAGGAGTCAGGTGAGACCGCGCCCGAAGTAgcggaaaaaacaaaaaataaatgcaCCGAATGTGAtaaagtttttgagaaaaagaaaCATTTCACCGAGCATTTAAGAACCTACCATCCATTTAGTAAGATTTATAAATGCGATGTCTGTGAAACTCGATTTACTAAAGTACAAAGTCTAAGGAGACACGTAAAAATTCATCAAGCCGATCAAAAAAATAAGCTCTGCACGTTTTGCGGAAAGGGTTTCACGCGAGCCGACGATCTTCGACGGCATACACGAATCCATACTGGAGAAAGGCCGTATGTTTGTACGATCTGCCCGAAACGTTATAAGCAAACGTCCGAGCTGAAAGAACATTTGGCAACGCATTCGAAAGATAAAAATTACATTTGCACAATATGTGGAAAGGCATTGCAGACGCGAAATGGTCATTATGTGCATATGAGAACCCATCTGGGCGTTAAGAAGCACTTTTGCCACTTTTGCGGAAATCGTTATGTCACCGCAGGCGAACTGAACTCGCATATTCGTCATATACATGAAAAAAAGAAACCGTTTTTATGTGACGTTGAAAACTGCGATCGTACATTCGGTACGAAACTTTCGCTAGATATTCATAAGAGGGCGCACACAGGCGAGCGTCCATTCGAATGCTCATATTGCAATAAGCGTTTGGCGACAGCCTCTTCTCTGTCCGAACACATACGAATCCATACGGAAACAAATCGATTAATGTGCGCGATTTGTCAGAAATTATTCAATGGTGTTCAATCACTCAAGCGACACATGCGTACTCATTATGAGTACAACGATACTACCAAGGATAATCCGGAGCGAAATTCGCTAACGAAAGATGCTTTTGAGTGTATCGTATGCGAAAAGAATTTCACGACTTTAGAAGATTTGGAGACCCACGCTGAAACGCATAGTACTAACGAGGATCAGTACGAAAAAATCCGTGACATTCATCTCGTTTTAGAAGAGGATAAGGCAGATAATTATATCCTACAAATGGAATGCGAAGACGATTCAATTCAATATGTTGATAGCTAA
Protein Sequence: MWNSLSNINFYENLLTKKSAAGLPVTDDEVNFEKICRTCLREAPDTDNLLKEFEIGAINFNMDGKMLKLIDMLAESTCLEVTENDYLPHQICNNCIQNISGAYFFRLQCHKAENMLYRLQNALSDISTPAKSQEEQEEEFALQNEEESISQITEDEQMTSENGYDYDKEMKIELEGIEYKINSEINDEDDESILEEYSDNEKEILEDSSPVQNFQIEIVSPPIQESGETAPEVAEKTKNKCTECDKVFEKKKHFTEHLRTYHPFSKIYKCDVCETRFTKVQSLRRHVKIHQADQKNKLCTFCGKGFTRADDLRRHTRIHTGERPYVCTICPKRYKQTSELKEHLATHSKDKNYICTICGKALQTRNGHYVHMRTHLGVKKHFCHFCGNRYVTAGELNSHIRHIHEKKKPFLCDVENCDRTFGTKLSLDIHKRAHTGERPFECSYCNKRLATASSLSEHIRIHTETNRLMCAICQKLFNGVQSLKRHMRTHYEYNDTTKDNPERNSLTKDAFECIVCEKNFTTLEDLETHAETHSTNEDQYEKIRDIHLVLEEDKADNYILQMECEDDSIQYVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -