Ctib033157.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- hang
- Assembly
- GCA_963669355.1
- Location
- OY770264.1:20910315-20932773[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3.9 4.4e+02 3.0 0.1 6 22 343 359 343 359 0.95 2 19 0.0064 0.72 11.8 1.8 1 22 428 449 428 451 0.90 3 19 0.06 6.7 8.8 1.1 1 23 553 576 553 576 0.89 4 19 0.00058 0.066 15.1 0.1 1 23 584 607 584 607 0.95 5 19 3.1 3.5e+02 3.4 0.4 2 23 620 642 619 642 0.92 6 19 0.85 95 5.1 2.7 1 23 645 667 645 667 0.98 7 19 0.0026 0.29 13.1 1.0 2 23 741 762 740 762 0.97 8 19 0.00011 0.012 17.4 4.3 2 23 801 823 800 823 0.96 9 19 0.035 3.9 9.5 0.8 2 23 832 854 831 854 0.95 10 19 0.092 10 8.2 0.3 1 23 867 890 867 890 0.93 11 19 0.0077 0.86 11.6 0.9 1 23 928 950 928 950 0.98 12 19 0.0078 0.88 11.5 1.0 1 23 958 981 958 981 0.95 13 19 0.00042 0.047 15.5 1.6 3 23 990 1010 989 1010 0.97 14 19 0.00032 0.035 15.9 0.9 3 23 1062 1082 1060 1082 0.97 15 19 0.00019 0.022 16.6 0.1 1 23 1115 1137 1115 1137 0.98 16 19 4.2e-05 0.0047 18.7 0.5 1 23 1163 1186 1163 1186 0.93 17 19 0.019 2.1 10.3 0.4 2 23 1206 1227 1205 1227 0.96 18 19 0.00011 0.012 17.4 0.1 2 23 1239 1260 1238 1260 0.97 19 19 0.0015 0.16 13.8 1.3 1 23 1408 1430 1408 1430 0.97
Sequence Information
- Coding Sequence
- ATGACAGACGATTTAATTGTCCGAGCGCGGCAGAGCTGCTGTCGCTTGTGCTTGGCCCCCGACAGTGAATGTGTCCCCATTTTGACGAGCTTGGCTGCTGATAAGGAGCCTCTTTCGACGAAAATCCATGCTTGCGTCAACATCAAGGTTAATCAAACGGATCGTTTATCCTCGAGGGTATGTCATTCGTGTATAAGCTTCTTGAATTCATGGCAGAGTTTCAAAAATCGATGTCTCGCTGCCCAGATGAAACAAATGAATTGGCTGGAAATGGCTAAGAACTCTATGCGACGGCAAATCGGTCAAATGCAGCAGCACCAAAATGCCTCTTCCATGTCGAGACGTAACAATAAATTCAGTCCGAATAAAAATTCGCAACAACGTCCAATGCCATGTCCGTTTATCGTCAAGGAAGAACCAATTGATGAGGAAGCCGATGCACAAGAAGCTGCGATGAAAGGTTTTGATCCGATGCAATATTTGGATGAGAACGAAATTCGGAAGCGCGAAGAATCAGAAGAAGATTCACTCTTGCGACCCAGCCGGATTAGGAATGAAGAACCGCAAATTCTAACGTCACTGGGACTCACACATATCAACAGTGTCAATCCGTACAGTATTATGaACAACTCTTTCGATGGGAATAAACTCGAAGATGAAGATTATTCAACTCCAAACTTAGGAGTGAATTCATCAACATGTCGAGTTTGTAATGTAATTCTGTCATCAGGACCGAATGCTCGTCGTCACGAACGTAATGTACACGGAAAAGTTCTGAatgaattaaatttgaaaacagAAATGCCGGAAATGTATGCGAAACCATCTCCGACTCATCGACTTTCACTGCTTAAACCAATAATGCCGCACTTAAAGCCAGCTCCACCTGTAACACCGGAAATGATGGGCATATACGATTACGATCAACCCGAAAAGTATCGTCATCTTTTGACCGATTCTAAATTGGCATTTATTCGTCGGCACGAGGAGTTTCTGACACAATATCAAGACATGACATGCATCTGCTGTCCGAAAACATTCCCTACATATAAAATATTCATGGCACACatgcgaaaaaaatatcaaaatttatcGCGTAATCTATGCTTCAAATGTATCAAGCAATTCCAATCGAAAGCAACATTTGTTTCgcatttgaagaaaaagaattgcATCAATTTGTATAAATTGTATAAAGCCGACGAAACAATTCCGAAATCGGGCCCAATGGGCTCATCGCCCGAAAAGATGGGCACCAAAGAGCTTCTAACCAACAAAGTATATGAATGCAAGCTGTGCACGAAAACGTTTCGCTTGAAAATGGAATTTAGAACTCACGTTTATGACGACCATGCCGAGATATTACGAAGAGATGTTGCACCTGGATTGTGCGGATTTTGCGATATGGAAATTGAAGATCCGGCAATCCGGCGACGTCACTATAACAACATGGAGTGTATAGTTATGTTGCATTGCGGCACGTGCGAGGCTAAATTCGAGAATCATCAAAAATTCATTGAACACGTTTATCAAGTTCATTTACCCATACCTGTCAATAACAACGAAGATGTTTTGGATAGTACCGATTCTTCGATGAAATTAAATTCATCGAATAGCGATAACATTTTTCCGAATGCATTCAATTCAAGATTGCCTCATAGTTGTATTATTTGTGGTCAGCGCTATAATAACTACTATAACGTGCTCAGACATATGGAAGGAAAACATCCTGATCAAGTGCCTAAACGATACATTTGTGAAATATGTAACGAGGGATTCCCAAGACAGGGACCACTACGTGAGCATATGCACGAAGTGCACGGCACAACACTGCCACGAACACGACGTGAATCTATGTCCTGTCGAATGTGTTCGGATGTATTTGATTCGAGAGAAAAATGGATAAAACATCAAACCGAAATGCATTCACGGTATACCTGTTGCGTATGCAACTATCAGAATAAAAGTTTGGAGGAGTTCACAAATCATATTGAAACTCATGCACAGCTCGCTTCGAAAAATTCTGCTTCGGCTTCCGTAACGATCATGTCTGTGACGACAAATGGTGGCGTTAATGATGACGAAGAGGAACAAGACGAACAAGAAGAAATGGAACAAGAACAAACGGAAGAAGAACAAACGAAAGAGGAAGAACCGGCTGAAGAAGAAGAGATCGCTACTCCTCCTCCAAAAAGAATGAAAATGGATGGTAATACAAAGGAGTGCCCCATATGCCATTCAAGTTTCAATGGTAATCTGGGTCTGTCCAATCATATGCGTTCGCATTTTTCACATGAAAAATCGAAATCGACTTCAAGAATTGTGACGATAAAGAAGAAGCACGCATATTTGAATTCGGTCTCCAGAAAAAGTGAAAACTCGACCGAAATCCGTCGGATTCGTTGTCGTATATGTCACAAAAGATTCACGTCGAAGAAAACTTACCGCAAGCATATGCTTGTTGATCATCAAGTGCGCAATGTTAACTTTATAAAGTGTGGAATTTGTAAAGCGGAATTTACGCACGACAAAGGTCTGAAAGTGCATTTGTATAAATTGCACGGTATTGTAATGTCTAGCGAAACGGTTGATATTCATTTCGAATGCGAGATTTGTTTTGCTATGTTCAAAAAAGAGCTGGAGCTGACAATTCACAAGAGTTTAGAACACAGCGGTCAAAACAATGAACAAGAAGAAAAACCGGAAAAATCAGAAAAGCAGGTACAACAACAGCAAATATCAAACAGTTCGACACAACAAAGAAACACTCCGTCACTTTGGTACCAGTGTCGATACTGTCCGTCGTATTTCGATACAAATAAGAAGCTTGCTATTCACGTCAATTCGCACAATGAATTCAATCCGACCGATTTCTCGTGCAAGGATTGTGGCAACGTGTATAACGGAAGAAAAAGCCTGTGGGTTCATCGGTACAAAAAACATCCGCTAATTGCCGATCCGGCCGCCTGTAAAATTTGCCAGAAGACTTTCTTCGACAAAAATATGCTACTAAATCATCTCAAAAATCACTCAGATCCGTCcgctaaaatttatataaatgaaCTAAAAGCGAAAATGGGAGATAGTGGGAATAATGAAACTGTAAATACGACTACGAATGTGGAAGACGATGAATTCGAGGAGGACGAAGACGAGGACGTTATTCTGATGGGTAAAGTTCATTGTTCTGTTTGTAACGAAGAGTTTACGGATCAGGATTTGTTCGACAAGCATATGGAAACGCATCAAGTTGACCTGTACAGTGATAATCCACTGGCCGCCATGTTCGATACGGGACCGGAAGATCCGAATCAGCAGTTTCAGTTGAGCGATAATGGTGCTTACACCTGCGACATTTGCCCGAAAACGTTTGCTGTGGTGCAGTCATTGAAAATTCATCGGAATTGGCATTTCAGAACCGATAGCAAACAGatatctATAGAACCTAATTGGGCTCGTGCTAGTGCCAGCAAAAAGAATTCCAATCACGTATGCGAATTTTGTGATTCAAGTTTTGCAAGTTCGAGCAATCTACGTCGTCACATTGCAGAAATTCATAATCGCGAATCGATCGATAATCCCGATCCTTCAAAAGTCTTTGTCGATAAGTATCTAGAATGTACAAAATGTGCCCTGAAATTCGAAACAAAATCGGAATGGGTTAATCATAAGATCACTCACGCTAAGGATAGCGCTAGCTCAGCATTCGAATGGGTTTGCGAGATATGCGGTAAAATTGTGTCGCGAAAAGAGCGACTCTTGCAGCACATGAACAGTCATTTGAAGATCAAGAAGGAAAAGGATGACGGAACGGGCAGTATTGTTAGTGAGGATCAAAGTAATTCACAGGATTCAGCTATGTCGAGTAATGCCGGTCGAATTAGTGCGATGGAAAAATTGACAACTGGCGATGACGATGAAGAAGATGAAGACGAAGAGGATGACGAAAACGAAGAGCCGGTGACATATCATCAGGAGAACATTCAGGAGGCTGAAGAAATAATCGATGATACTCATGAAAATGGcgacgatgatgatgacgagGACGACGAGCATTACGGTGAAcctgatgatgatgacgatgatgacgAACATGCTACTATAATTCGATacgatggtgatgatgatgaagacGAATCCAGTCAGCACTATCAAGAAATCGATCCGAATCAAGATGACGAAGAtgaggaagaagaagaagaccaagATAATTCAGGTTCATATTCCTGTGATTTATGTCAAGTTTATTTCGAGACATCGAAACAATTACGGCGTCACGTGACTAGTCATTTTTTGAATGGTCCAGGATCGGTTACGCTAACGGAAATTCCCAAAGAGAAAAACTTTCCAGCGAAAGTTCAACTCGGAGAAGATGTCACAACAATAACAcctgtataa
- Protein Sequence
- MTDDLIVRARQSCCRLCLAPDSECVPILTSLAADKEPLSTKIHACVNIKVNQTDRLSSRVCHSCISFLNSWQSFKNRCLAAQMKQMNWLEMAKNSMRRQIGQMQQHQNASSMSRRNNKFSPNKNSQQRPMPCPFIVKEEPIDEEADAQEAAMKGFDPMQYLDENEIRKREESEEDSLLRPSRIRNEEPQILTSLGLTHINSVNPYSIMNNSFDGNKLEDEDYSTPNLGVNSSTCRVCNVILSSGPNARRHERNVHGKVLNELNLKTEMPEMYAKPSPTHRLSLLKPIMPHLKPAPPVTPEMMGIYDYDQPEKYRHLLTDSKLAFIRRHEEFLTQYQDMTCICCPKTFPTYKIFMAHMRKKYQNLSRNLCFKCIKQFQSKATFVSHLKKKNCINLYKLYKADETIPKSGPMGSSPEKMGTKELLTNKVYECKLCTKTFRLKMEFRTHVYDDHAEILRRDVAPGLCGFCDMEIEDPAIRRRHYNNMECIVMLHCGTCEAKFENHQKFIEHVYQVHLPIPVNNNEDVLDSTDSSMKLNSSNSDNIFPNAFNSRLPHSCIICGQRYNNYYNVLRHMEGKHPDQVPKRYICEICNEGFPRQGPLREHMHEVHGTTLPRTRRESMSCRMCSDVFDSREKWIKHQTEMHSRYTCCVCNYQNKSLEEFTNHIETHAQLASKNSASASVTIMSVTTNGGVNDDEEEQDEQEEMEQEQTEEEQTKEEEPAEEEEIATPPPKRMKMDGNTKECPICHSSFNGNLGLSNHMRSHFSHEKSKSTSRIVTIKKKHAYLNSVSRKSENSTEIRRIRCRICHKRFTSKKTYRKHMLVDHQVRNVNFIKCGICKAEFTHDKGLKVHLYKLHGIVMSSETVDIHFECEICFAMFKKELELTIHKSLEHSGQNNEQEEKPEKSEKQVQQQQISNSSTQQRNTPSLWYQCRYCPSYFDTNKKLAIHVNSHNEFNPTDFSCKDCGNVYNGRKSLWVHRYKKHPLIADPAACKICQKTFFDKNMLLNHLKNHSDPSAKIYINELKAKMGDSGNNETVNTTTNVEDDEFEEDEDEDVILMGKVHCSVCNEEFTDQDLFDKHMETHQVDLYSDNPLAAMFDTGPEDPNQQFQLSDNGAYTCDICPKTFAVVQSLKIHRNWHFRTDSKQISIEPNWARASASKKNSNHVCEFCDSSFASSSNLRRHIAEIHNRESIDNPDPSKVFVDKYLECTKCALKFETKSEWVNHKITHAKDSASSAFEWVCEICGKIVSRKERLLQHMNSHLKIKKEKDDGTGSIVSEDQSNSQDSAMSSNAGRISAMEKLTTGDDDEEDEDEEDDENEEPVTYHQENIQEAEEIIDDTHENGDDDDDEDDEHYGEPDDDDDDDEHATIIRYDGDDDEDESSQHYQEIDPNQDDEDEEEEEDQDNSGSYSCDLCQVYFETSKQLRRHVTSHFLNGPGSVTLTEIPKEKNFPAKVQLGEDVTTITPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -