Ctib032830.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chorisops tibialis
Gene Symbol
ZFY
Assembly
GCA_963669355.1
Location
OY770264.1:13834336-13839589[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1.5e-05 0.0017 20.1 2.6 1 23 376 398 376 398 0.99
2 19 0.033 3.7 9.6 2.1 1 23 404 427 404 427 0.97
3 19 0.00021 0.023 16.5 0.7 2 23 442 463 441 463 0.97
4 19 0.0053 0.6 12.1 0.8 1 23 469 492 469 492 0.98
5 19 5.2 5.9e+02 2.7 0.2 2 23 756 778 755 778 0.92
6 19 8.1e-06 0.00091 20.9 4.0 1 23 846 868 846 868 0.99
7 19 0.44 50 6.0 3.1 1 23 874 897 874 897 0.97
8 19 0.013 1.5 10.9 2.0 2 23 912 933 911 933 0.97
9 19 0.006 0.67 11.9 1.4 1 23 939 962 939 962 0.97
10 19 2.8e-06 0.00031 22.4 1.4 1 23 976 998 976 998 0.99
11 19 0.11 12 8.0 3.5 1 23 1004 1027 1004 1027 0.98
12 19 1.7e-05 0.0019 19.9 3.7 1 23 1041 1063 1041 1063 0.99
13 19 0.0089 1 11.4 2.9 1 23 1069 1092 1069 1092 0.97
14 19 9e-05 0.01 17.6 3.3 1 23 1106 1128 1106 1128 0.99
15 19 0.019 2.1 10.3 2.1 1 23 1134 1157 1134 1157 0.97
16 19 5.2e-05 0.0059 18.4 2.2 1 23 1171 1193 1171 1193 0.98
17 19 0.0082 0.92 11.5 5.4 1 23 1199 1222 1199 1222 0.97
18 19 0.055 6.1 8.9 3.2 1 23 1236 1258 1236 1258 0.99
19 19 0.0016 0.18 13.7 1.4 1 23 1264 1287 1264 1287 0.97

Sequence Information

Coding Sequence
ATGGTTAATAATGAGTTTATGAACATAATTCTTGGACAATACCTTAAAATTGATGCTAATTTGAAATCATTTCCATTCTTTACGCAGGTCGACAAAGAAGATGATTTTCCGCATAACATTTGTGCCGTCTGCCTTAAAGAAATTCAACAAgcgtatttatttgatttgaaatgtaaAAAATCAGAAATTATTTTGCATCAATTGAGAGAAATCAGAGTTAACTTAAAGAAACTAAACGAAATACCAAAACAAAGTGACATTGTTAGCGAAGTTGCTGGTGAACTAGAAAGTATTCTAAAAGAAGATTTTAAGCTCGAAGATTTCATGAATCTCTGTGATCGCAATATCGACGTTTCCGAAAGTGCTGCAATTGGACGAACTGAACCTTTAGAAGAACAAAATCCAAATGCATGTGATAAATTAAATCTTCAAATTGTGAAAGAGGAATGTACTCGAGATAGCGACCATTTAATGAAATATAGTTCAAATGCGAAGGACGTAGAAAGCATCCAAAtagtttcaaattttcaaattgtagaatATGACTGTTATCCTCAAATAACTTTGAAACAAGAGCCTGGCCACAACAGCTTTACTATTAGAAGCAATCCAGCTCAGAACGAACTAGAACTCAACCAAAACTCatcaaatattgaaattttggatGAATGCGCTTCGGAGTATAAAGGTATTTTTAGCACAGAGCGTAATCAGAACAACCTAATTATAAAAGGCAAtgaaaatgagaaagagtttagcgaaatatcgtcaaattttcaagatcttgAAGAAGAATGTGTCCCGGATTTTCATGTGACTTTCAAATCAGACCCCGAACTGGATATTGGCATAGATTGCTATGACGAGCAATTAGAGTGCTCGGTTTTTTCAAAACAGTTTCAATCGCTTGATATGTTCCACGGTCACATAGTATCTGATCATTTAGAAGAAAACATTTGCAAACTTTGCAATGAAGAATTTGAATGCAGCCAACTCGAACATTCGGCCAATCATGTTGCACGTAGTGAACCGGAGAATCCATCTGGTTCAGTTGAGTCAATAAGACAATCTGAAAAGGAGCATATGACAAGTGTACACAATGGTGAATTCTTTGGCAAACCTGATTTCCAATGTGAGATTTGTTCAAAAGTTTACGTTCATAGATACCGTTTAGTAAATCATATGCGTACGCATACCGGTGAACAACCGTTTCAATGTCAATTTTGTCCGGCAAAGTTTGGACACAGTAATACGCTGATATACCATGTACAAAGTAAGCACACAAATGAATTGATTAGTGATGATAAACCAGTACTAGACTTGCAATGCAGTGTTTGTAACAAAGTTTTAAGTCGAAGAAATCGATTAGCAAATCATATGCGTttgcataccggtgaaaaaccgtttcaatgtCAATTATGTCCGGCAAAATTTGGAAGCAGTAACACACTGCTATACCATAGAAGAATTAAGCACACGGATAAATTGGTCGACAAAGAAGATGATTTTCCGCATAACATTTGTGACATCTGCCTTAAAGAAATTCAACAAgcgtatttattcgatttgaaATGTAAAAAATCAGAAATTATTTTGCATCAATTGAGAGAAATCAGAGTTAgcttaaaaaaactaaaagaaatacCAAAACAAAATGACATTGTTAGCGAAGTTGCTGGTGAACTTGAAAATATTCTAAAAGAAGATTTTAAGCTCGAAAATATCATGAGTCTCTGTGATCGCAAAATCAGCGATTCCGAAAATAATGCAAGTGAAAGAATTGGATCTGTCGAAGAAGAAAATACTAAGGCAAGTGAGAAATTAGATCTTCGAATTGTGGAAGAAGAATGTACTCGAGATCTTCAACTGGCCCTTAAAAGAGAGCCTGAGCAAAGCAACTATTTTATAAAAGGTGATACAAATGAGGAAGAATTAGAACGCATCGAAAtagtttcaaattttcaaattatagaAGAAGACTGTGTTCCTCATATAACTGTGAAACAGGAGCCTGATCACAAAAGCCCTATTATTAGAAATAATGCAGCTCAGAACGGATCTGAACTCAACCAAAActcatcaaattttgaaatcttgGATCCGGAATATCAAGTTATTTTCAACACAGAGTCTGATCAGAACAACCTTCTtataaaaaacaatgaaaatgagGAAGAATTAGAATTCAGCGTAACGGATTTTCCATTGACTTTTAAATCAGAACCCGAGCTAGATATTGGCATAGATTGCAATGACGAGCGGTTGCAGTGCTCGGCTTGTTTAAAACAGTTTCAATCGCTTGATGTGTTTCGTGATCACATAGTATCTGATCATTTAGAAGAAAACATTTGCAAACTTTGCAATGaagAATTTGAATGCAGTCAATTCGAACATTCGGCTAAACATCTACCATTTAGCCATTTGGTTGCAATCGAACCGACTAATCCGTCTGACACAAACGAAGAGTCAATAAGACATACTAAAGAAGTGCATATGACAGCAATACACACAGACGAATTTTTTGGCAAACCTGATTTTCGATGTAAGATTTGTTCAAAAGTTTTCGTTCATAGATACCGTTTAGTAAATCATATGCGTactcataccggtgaaaaaccgtttcactgtgaattatgtccggaaaagtttggaaacattaGCGCGCTGCTAtgccatagacgaactaagcacacagatgaaCTGATTAGTGATGATAAACCCGTACCAGACTTGCAATGCAGTGTTTGCTGCAAAGTTTTCGGTCGAAAAATTCGATTAGAAAATCATATGCGTttgcataccggtgaaaaaccgtttcaatgtAAAATATGCCcggaaaagtttggaaacagcaAAGGGCTACTATTCCACAGACGAACTAAACACACAGATCAATTCAGTAGTGATGATAAATCAGTACCAGACTTCCAATGCAAtatttgctctaaaattttcgGTCAGAAATACCTATTAAGATATCATATGCGAgtgcataccggtgaaaaaccgtttcaatgtaaatcatGCCCGGAAAAGTTTAGAATCAGTAGCGCGCTGCTGtgccatagacgaactaagcacacagatgaaTTCATTAGTGCTGATCAACCAGTACCAGACTttcaatgcagtgtttgctacaaagttttcaGTCTGAAATCCCTATTAAGAAATCATATGCATACTCATACCGGCGAAAAACCGTTCCACTGTGAATTATGCCCGGAAAAGTTTGGAACTACACGCACGCTACTAAgccatagacgaactaagcacacagatgaGTTCATAAGTAATGATAAACCAGTACCAGACTTCCAATGCAGcatttgctacaaagttttcggtgtgaaatgcaaattgaaaaatcatatgcgtgtgcataccggtgaaaaaccgtttcacTGTGAATTATGTCCGGAAAAGTTTTTAAACAGTAGCGCGCTGTTATaccatagacgaactaagcacacagatgaaTTGATTGGTGATAATAAACCAATACCAAACTTCCAATGCAGTATTTGTTTCAAAGTTTTCGGTATGAAATCCCAATTAAGAATTCATATGTGTGCTCACACCGGCGAAAAACCGTTTAACTGTGAATTATGTCCGGCAAAGTTTAGACACAGTAACACGCTGCTACACCATAAACGAACTAAGCACACCGATGAATTGATTAGTGAGGATAAACCAGTACCAGCCTttcaatgcagtgtttgctGCAAAGTTTTTGGTTTGAAATACATATTAAGAAATCATATGCGTACTCATACCGGCGAAAAACCGTTTAACTGTGAATTATGTCCGAAAAAATTTGGAAACACTAGAGCGCTGCTATaccatagacgaactaagcacacagatgaaTTGATAAGTGTTGATAAACCGGAAACCAGACTTTCAATGCAGTGA
Protein Sequence
MVNNEFMNIILGQYLKIDANLKSFPFFTQVDKEDDFPHNICAVCLKEIQQAYLFDLKCKKSEIILHQLREIRVNLKKLNEIPKQSDIVSEVAGELESILKEDFKLEDFMNLCDRNIDVSESAAIGRTEPLEEQNPNACDKLNLQIVKEECTRDSDHLMKYSSNAKDVESIQIVSNFQIVEYDCYPQITLKQEPGHNSFTIRSNPAQNELELNQNSSNIEILDECASEYKGIFSTERNQNNLIIKGNENEKEFSEISSNFQDLEEECVPDFHVTFKSDPELDIGIDCYDEQLECSVFSKQFQSLDMFHGHIVSDHLEENICKLCNEEFECSQLEHSANHVARSEPENPSGSVESIRQSEKEHMTSVHNGEFFGKPDFQCEICSKVYVHRYRLVNHMRTHTGEQPFQCQFCPAKFGHSNTLIYHVQSKHTNELISDDKPVLDLQCSVCNKVLSRRNRLANHMRLHTGEKPFQCQLCPAKFGSSNTLLYHRRIKHTDKLVDKEDDFPHNICDICLKEIQQAYLFDLKCKKSEIILHQLREIRVSLKKLKEIPKQNDIVSEVAGELENILKEDFKLENIMSLCDRKISDSENNASERIGSVEEENTKASEKLDLRIVEEECTRDLQLALKREPEQSNYFIKGDTNEEELERIEIVSNFQIIEEDCVPHITVKQEPDHKSPIIRNNAAQNGSELNQNSSNFEILDPEYQVIFNTESDQNNLLIKNNENEEELEFSVTDFPLTFKSEPELDIGIDCNDERLQCSACLKQFQSLDVFRDHIVSDHLEENICKLCNEEFECSQFEHSAKHLPFSHLVAIEPTNPSDTNEESIRHTKEVHMTAIHTDEFFGKPDFRCKICSKVFVHRYRLVNHMRTHTGEKPFHCELCPEKFGNISALLCHRRTKHTDELISDDKPVPDLQCSVCCKVFGRKIRLENHMRLHTGEKPFQCKICPEKFGNSKGLLFHRRTKHTDQFSSDDKSVPDFQCNICSKIFGQKYLLRYHMRVHTGEKPFQCKSCPEKFRISSALLCHRRTKHTDEFISADQPVPDFQCSVCYKVFSLKSLLRNHMHTHTGEKPFHCELCPEKFGTTRTLLSHRRTKHTDEFISNDKPVPDFQCSICYKVFGVKCKLKNHMRVHTGEKPFHCELCPEKFLNSSALLYHRRTKHTDELIGDNKPIPNFQCSICFKVFGMKSQLRIHMCAHTGEKPFNCELCPAKFRHSNTLLHHKRTKHTDELISEDKPVPAFQCSVCCKVFGLKYILRNHMRTHTGEKPFNCELCPKKFGNTRALLYHRRTKHTDELISVDKPETRLSMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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