Basic Information

Insect: Chorisops tibialis
Gene Symbol: -
Assembly: GCA_963669355.1
Location: OY770264.1:13226321-13232613[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.9e-06 0.00033 22.3 0.3 1 23 174 197 174 197 0.98

2 11 1.3e-05 0.0015 20.3 2.8 3 23 204 224 203 224 0.98

3 11 0.0025 0.29 13.1 0.9 1 20 230 249 230 252 0.93

4 11 0.0086 0.96 11.4 0.5 1 23 260 282 260 282 0.91

5 11 2.1e-05 0.0023 19.7 2.1 1 23 288 310 288 310 0.98

6 11 0.0084 0.95 11.4 1.4 1 23 316 338 316 338 0.97

7 11 2.2e-05 0.0025 19.6 1.2 1 23 344 366 344 366 0.97

8 11 1e-06 0.00012 23.8 1.8 2 23 372 393 371 393 0.97

9 11 0.00058 0.065 15.1 3.2 1 23 399 421 399 421 0.97

10 11 4.5e-06 0.0005 21.8 2.2 1 23 426 448 426 448 0.95

11 11 5.6e-05 0.0063 18.3 2.0 1 23 454 477 454 477 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.9e-06	0.00033	22.3	0.3	1	23	174	197	174	197	0.98
2	11	1.3e-05	0.0015	20.3	2.8	3	23	204	224	203	224	0.98
3	11	0.0025	0.29	13.1	0.9	1	20	230	249	230	252	0.93
4	11	0.0086	0.96	11.4	0.5	1	23	260	282	260	282	0.91
5	11	2.1e-05	0.0023	19.7	2.1	1	23	288	310	288	310	0.98
6	11	0.0084	0.95	11.4	1.4	1	23	316	338	316	338	0.97
7	11	2.2e-05	0.0025	19.6	1.2	1	23	344	366	344	366	0.97
8	11	1e-06	0.00012	23.8	1.8	2	23	372	393	371	393	0.97
9	11	0.00058	0.065	15.1	3.2	1	23	399	421	399	421	0.97
10	11	4.5e-06	0.0005	21.8	2.2	1	23	426	448	426	448	0.95
11	11	5.6e-05	0.0063	18.3	2.0	1	23	454	477	454	477	0.98

Sequence Information

Coding Sequence: ATGGACTTGAATTCGCCGATTTGTCGGGTTTGTTTGAAAAATTCGATGGAACTGATCGAGTTGGAGAGCGTAATCGAAGATACCCCGGCACTGACTATTCTCGAAAGTTTTAACGCTTGTACTCAATTGAATGCCCTAGTAGATGACGATCTTCCAAAATATTTGTGTATTGTTTGTAACAATGATTTACGTTCGGCTTACGAATTCGTGCGGAAGGCTCAGGAAGCAGACATTCAATTACGCGTGAAATTAAAGGAAAGCGTCTTTGCACTGGCCGAGGACGACGATCAATTCGaaattGGCCAAAACGTTTTGGATATTAAGCTAGAAGACGGGAATGAAATAGTCGAGGTTTTCTATCAGGAAGGGGAAGACTATGACGGCGATGAAGTAGCCATTCATCTGGTTGAGGTAAATGAAACGGATAGTTCAATTCAAATCGAACGTTTAAGTAATGGACACAACGACGAGGGCACCGAGAACACGGAAGTTGCGATTGAAGTCGACAGGAAGCCACAGTACGAATGTAGTCAGTGCTCAAAGGTTTTTATTTCGTCCGATGAACTCGAGAGCCATTTGAAAAAAGCACACGACGACAATAAATTGCTTTGTAATATTTGTGGCAAGACTTGCTCGACACGAAGTTCGTTGAGTTCGCATATGCTTCAGCACAAAGgCGAAAAACCATTTTCATGCGATCAGtgcaacaaaaaatatttcacgaaaAACGGCTTACAATTGCATATTCCGATTCATTCGGGCGGAAGATCATCGAAATACTTGTGTTCAATATGTGGTAAAGGATTCGCAACGAAACAACGAATTGATGTGCACCATTTAGTTCATACAGGCGAAAGAAATTACGATTGCACATACTGTGaaaaaaagtttgctacccgaTTTCGTTTACAAAATCATTTACGAATTCATACAGGCGAACGACCATACGAATGTTCAACGTGTGGCTTAAAATTTGCCCAAACCAATGCTCTCAAGTGCCACGAACGGATTCATACCGGCGAGAAACCTTACGAATGTAAAATCTGTGGTAAACGTTTCAATCAAAATACAATCTTAAAAACCCATATGACCTTGCATACCGGTAAGACCGTTAAATGTCCTCAATGCGATAAAAAATTCAGTCGTCCATCGTGCTTAATATTGCATCAACGTGAGCATACCGGCGAGAAACCATACGCTTGTTACAAATGCCCGAATCGATATAAACAAAAGAGCCATCTAGATCGACATTTGGACACACATTTCGGCATAAAGCATAAATGCCCGATGTGTGGAAAGGAGTATTCGAAACGATCGTCGTTAAAAATTCATATGTTCGATCATTCGGAAGATAAACCGTTTCAATGTGACGATTGCCTAATGAAATTTACGCGAAAGGACAAGTACAAAGCACACTTAAAAAAGGCGCACAATAAAATTATAGTTAAAAATGAAATAGCAGAAGTTGTAAGAGTTGAAAATTGTGAAGAATCGGTCGTAAAACACGAGCAAGAAATTATAGTCGAACTAGAATCGGGATATACCGTTGATGGTGAAATTGAAAAGGAGGGCCTCTATCAAATTGTCGAAATTCAATAG
Protein Sequence: MDLNSPICRVCLKNSMELIELESVIEDTPALTILESFNACTQLNALVDDDLPKYLCIVCNNDLRSAYEFVRKAQEADIQLRVKLKESVFALAEDDDQFEIGQNVLDIKLEDGNEIVEVFYQEGEDYDGDEVAIHLVEVNETDSSIQIERLSNGHNDEGTENTEVAIEVDRKPQYECSQCSKVFISSDELESHLKKAHDDNKLLCNICGKTCSTRSSLSSHMLQHKGEKPFSCDQCNKKYFTKNGLQLHIPIHSGGRSSKYLCSICGKGFATKQRIDVHHLVHTGERNYDCTYCEKKFATRFRLQNHLRIHTGERPYECSTCGLKFAQTNALKCHERIHTGEKPYECKICGKRFNQNTILKTHMTLHTGKTVKCPQCDKKFSRPSCLILHQREHTGEKPYACYKCPNRYKQKSHLDRHLDTHFGIKHKCPMCGKEYSKRSSLKIHMFDHSEDKPFQCDDCLMKFTRKDKYKAHLKKAHNKIIVKNEIAEVVRVENCEESVVKHEQEIIVELESGYTVDGEIEKEGLYQIVEIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -