Ctib032817.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chorisops tibialis
Gene Symbol
ZFY
Assembly
GCA_963669355.1
Location
OY770264.1:13659391-13662569[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.015 1.7 10.6 0.7 2 23 300 322 299 322 0.94
2 16 9.5e-06 0.0011 20.7 2.6 1 23 385 407 385 407 0.99
3 16 1e-05 0.0011 20.7 2.0 2 23 414 436 413 436 0.96
4 16 0.00023 0.026 16.4 3.5 1 23 450 472 450 472 0.99
5 16 4 4.4e+02 3.0 0.7 13 23 476 486 475 486 0.92
6 16 0.0011 0.13 14.2 2.6 1 23 492 515 492 515 0.97
7 16 0.0001 0.011 17.5 2.7 1 23 529 551 529 551 0.99
8 16 0.025 2.8 10.0 3.2 1 23 557 580 557 580 0.97
9 16 9.2e-05 0.01 17.6 3.2 2 23 595 616 594 616 0.97
10 16 0.0054 0.61 12.1 1.4 1 23 622 645 622 645 0.97
11 16 7.5e-06 0.00084 21.0 2.7 1 23 659 681 659 681 0.98
12 16 0.0006 0.067 15.1 0.6 1 23 687 710 687 710 0.97
13 16 8.8e-07 9.9e-05 24.0 3.5 1 23 724 746 724 746 0.98
14 16 0.0011 0.12 14.2 3.2 1 23 752 775 752 775 0.97
15 16 0.0012 0.14 14.1 7.0 1 23 789 811 789 811 0.98
16 16 0.00054 0.06 15.2 0.5 1 23 817 840 817 840 0.97

Sequence Information

Coding Sequence
ATGGTTAATAGTCAGGATATTAACATAATTCTTAAACCATACCTTACGATTGATTTCATTTTGAAGTCCTTTCCTTTCTTTACGCAGGTCGACAAAGAAGATGATTTTCCGCACAACATATGTGACATCTGCCTTAAAGAAATTCAACAAgcgtatttatttgatttgaaatgtaGAAAATCAGAAATCATTCTACATCAACTGAGAGAAATCAGAGTTAacttaaaaaaactaaaagaagTACCAAAACAAAGTGAAATTGTTAGCGAAGTCGCTGGTGAACTTGAAAGTATTCTAAAAGAAGATTTAAAGCTCGAAGGTATCATGAATTTGTGTGATCGCAACATCTGTGATTCCGAAAGTAATGCATGTGATAGGATTCAATCTGTCGAAGAAGAGAATGCTAATGCAAATGAGAAATTGAATCTTCGAATTGTGGAAGAAGAATTTACTGAAGATCTTCTTCTGGCCTTTAAAAGAGAGCCTGAGCAAAGCAAACATATCAAAAATGATACAAATGAGGAAGAATTAGAACGCATTGAAATagtgtcaaattttcaaattatagaAGAAGACTTTGATCCTCAAATAACTTTGAAACAGGAGCCTAATTGCAACAGCCTTATTATTAGAAATAATCCAGCACAAAACGAACCCAACCAAAActcatcaaattttgaaatcttgGATGAATGCGCTTCAGAATATCAAGATATTTTCAACATAGAGCGTAATCAGAACAACCTAATTATAAAAGACAATGAAAATGAGGAAGAATTCAGCGAAATGtcgtcaaattttcaagttgtcgGAGAAGAATGTGTCCAGGATTTTCATGTGACTTTTAAATCAGAACCCGAGCTGGATATTGGCATAGATTGCCATGACGAGCAATTGAAGTGCTCGAATTGTTTAAAACAATTTGAATCGCTTGATACGTTCCGCAGTCACATAGTATCTGATCATTTAGAAGAAAACATTTGCAAACTTTGCAATGAagAATTTGAATGCAGTCAATTCGAACATTCGGCCAAACATTTTCCATTTAGCGAACCCGAGAATTCATCTGGCACAAGTGAAGAGTCAATAACACAAACTGAAAAAGTGCATATGACAGGTGTACACAAAGATGAATTATTAGGCAAACATAATTTCCAATGTGAGATTTGTTCAAAAGTTTACGTTCATAGATACCGTTTAGTAAATCATATGCGTACGCATACCGGTGAGAAGCCGTTAAACTGTGAATTATGTccgaaaaagtttaaaaatagttaCTCGCTGCTTCGCCATAAACGAACTCAGCACACAGCTGAATTGATTAGTGATGATAAGCCAGTACCAGACTttcaatgcagtgtttgctacaaagttttcggCGTGAAATGCAAATTAAAAGATCATATGCGTTCACATACAGGAGAgaaatacaatttaaaaaatcatttgcGTCTGCATACCGGTGAGAAGCCGTTTAACTGTGAATCATGTACGAAAAAGTTTATAACCAGTCGCGCGCTGCTTTaccatagacgaactaagcacacagatgaaTTGATTAGTAATGGTGAACCAGTACCAGAATttcaatgcagtgtttgctacaaagtttgtggTCTGAAAAgccaattaaaaattcatatgcGTTCACATACtggtgaaaaaccgtttcaatgtAATTTATGCCCGGAAAAGTTTAGAATCAGTAGCGAGCTGCTATGCCATAaacgaactaagcacacaggTGGACTGAATAGTACTGATAAATCAGTACCAGACTTGCAGTGCAatatttgctacaaagttttcggCTCGAAATGCAAATTAAAATATCATATGCGTGTGCATACCGGTGAGAAGCCGTTTAATTGTGAATTATGTCCGGCAAAGTTTAGTCGCAGTAATATTCTGCGAAACCATAAGCGAACTAAGCACGCAGATGAATTGATTAGTAATAATAAGCCAGTACCAGACTTTCAGTGCACGATTTGCTATAAGGTTTTCGGTACGAAGTActcattaaaaattcatatgcATGTGCATACCGGTGAGAAATCGTTTAACTGTGAATTATGCCCGGCAAAGTTTGGTTACAGTGCTGCGCTGCGAAAGCATAAGCGAACTAAGCACGCAGATAAATTGATTAGTGATGATAAACCAGTACCAGTCTTTCCATGCACTATTTGCAACAAAGTTTTTTGTCGGAAAAGCCGATTAAAAATTCATATGCGTTTACATACTGGTGAAAAACCATTTCACTGTGAATTATGTCCGGAAAAGTTTAGAAACAGTAGGGCGCTGCTGTACCATAaacgaactaagcacacagaaTTATTCGTAAGTGCTAATAGATCAGTATCTGACTTCCAGTGCTGTATTTGCCACAAAGCTTTCGGTCGGAAAAGCGTATTAAAATATCATATGCATGTGCATACCGGTGAGAAACCGTTTAACTGTGAATTATGCCCGGCAAAGTTTGGTTACAGTGCTGCGCTGCGAAAACATAAGCGAACTAACCACGCAGATGAATTGATTAATGATAATAAACCAGAAGCTAGAGTTTCAATGCAGTGA
Protein Sequence
MVNSQDINIILKPYLTIDFILKSFPFFTQVDKEDDFPHNICDICLKEIQQAYLFDLKCRKSEIILHQLREIRVNLKKLKEVPKQSEIVSEVAGELESILKEDLKLEGIMNLCDRNICDSESNACDRIQSVEEENANANEKLNLRIVEEEFTEDLLLAFKREPEQSKHIKNDTNEEELERIEIVSNFQIIEEDFDPQITLKQEPNCNSLIIRNNPAQNEPNQNSSNFEILDECASEYQDIFNIERNQNNLIIKDNENEEEFSEMSSNFQVVGEECVQDFHVTFKSEPELDIGIDCHDEQLKCSNCLKQFESLDTFRSHIVSDHLEENICKLCNEEFECSQFEHSAKHFPFSEPENSSGTSEESITQTEKVHMTGVHKDELLGKHNFQCEICSKVYVHRYRLVNHMRTHTGEKPLNCELCPKKFKNSYSLLRHKRTQHTAELISDDKPVPDFQCSVCYKVFGVKCKLKDHMRSHTGEKYNLKNHLRLHTGEKPFNCESCTKKFITSRALLYHRRTKHTDELISNGEPVPEFQCSVCYKVCGLKSQLKIHMRSHTGEKPFQCNLCPEKFRISSELLCHKRTKHTGGLNSTDKSVPDLQCNICYKVFGSKCKLKYHMRVHTGEKPFNCELCPAKFSRSNILRNHKRTKHADELISNNKPVPDFQCTICYKVFGTKYSLKIHMHVHTGEKSFNCELCPAKFGYSAALRKHKRTKHADKLISDDKPVPVFPCTICNKVFCRKSRLKIHMRLHTGEKPFHCELCPEKFRNSRALLYHKRTKHTELFVSANRSVSDFQCCICHKAFGRKSVLKYHMHVHTGEKPFNCELCPAKFGYSAALRKHKRTNHADELINDNKPEARVSMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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